RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 BNIPLQ7Z465 357 aa23.35■■□□□ 1.33
USF3-203ENST00000491165 ITIH5Q86UX2 942 aa23.35■■□□□ 1.33
USF3-203ENST00000491165 ACTL9Q8TC94 416 aa23.35■■□□□ 1.33
USF3-203ENST00000491165 PYROXD1Q8WU10 500 aa23.35■■□□□ 1.33
USF3-203ENST00000491165 NSMCE1Q8WV22 266 aa23.35■■□□□ 1.33
USF3-203ENST00000491165 CASP10Q92851 521 aa23.35■■□□□ 1.33
USF3-203ENST00000491165 CDCA3Q99618 268 aaPredicted RBP23.35■■□□□ 1.33
USF3-203ENST00000491165 APOL5Q9BWW9 433 aa23.35■■□□□ 1.33
USF3-203ENST00000491165 MAK16Q9BXY0 300 aaKnown RBP23.35■■□□□ 1.33
USF3-203ENST00000491165 LRMDAQ9H2I8 198 aa23.35■■□□□ 1.33
USF3-203ENST00000491165 ZWILCHQ9H900 591 aa23.35■■□□□ 1.33
USF3-203ENST00000491165 SFMBT1Q9UHJ3 866 aa23.35■■□□□ 1.33
USF3-203ENST00000491165 RABGEF1Q9UJ41 708 aa23.35■■□□□ 1.33
USF3-203ENST00000491165 CLUHO75153 1309 aa23.35■■□□□ 1.33
USF3-203ENST00000491165 C2orf78A6NCI8 922 aa23.35■■□□□ 1.33
USF3-203ENST00000491165 DPYSL4O14531 572 aa23.35■■□□□ 1.33
USF3-203ENST00000491165 ZWINTO95229 277 aa23.35■■□□□ 1.33
USF3-203ENST00000491165 RPSAP08865 295 aaKnown RBP23.35■■□□□ 1.33
USF3-203ENST00000491165 IGFBP4P22692 258 aa23.35■■□□□ 1.33
USF3-203ENST00000491165 GABRR2P28476 465 aa23.35■■□□□ 1.33
USF3-203ENST00000491165 HDAC4P56524 1084 aa23.35■■□□□ 1.33
USF3-203ENST00000491165 SLC5A9Q2M3M2 681 aa23.35■■□□□ 1.33
USF3-203ENST00000491165 FAM172AQ8WUF8 416 aa23.35■■□□□ 1.33
USF3-203ENST00000491165 CNPY3Q9BT09 278 aa23.35■■□□□ 1.33
USF3-203ENST00000491165 PRKD2Q9BZL6 878 aa23.35■■□□□ 1.33
USF3-203ENST00000491165 ZDHHC7Q9NXF8 308 aa23.35■■□□□ 1.33
USF3-203ENST00000491165 LMCD1Q9NZU5 365 aa23.35■■□□□ 1.33
USF3-203ENST00000491165 SYNJ2BP-COX16A0A087WUM0 186 aa23.34■■□□□ 1.33
USF3-203ENST00000491165 PTPN9P43378 593 aa23.34■■□□□ 1.33
USF3-203ENST00000491165 HADHQ16836 314 aaKnown RBP23.34■■□□□ 1.33
USF3-203ENST00000491165 SMTNL2Q2TAL5 461 aa23.34■■□□□ 1.33
USF3-203ENST00000491165 SLC25A52Q3SY17 297 aa23.34■■□□□ 1.33
USF3-203ENST00000491165 STXBP5Q5T5C0 1151 aa23.34■■□□□ 1.33
USF3-203ENST00000491165 TAC4Q86UU9 113 aa23.34■■□□□ 1.33
USF3-203ENST00000491165 DQX1Q8TE96 717 aaKnown RBP23.34■■□□□ 1.33
USF3-203ENST00000491165 CPT1BQ92523 772 aa23.34■■□□□ 1.33
USF3-203ENST00000491165 CENPIQ92674 756 aaPredicted RBP23.34■■□□□ 1.33
USF3-203ENST00000491165 TCEAL4Q96EI5 215 aa23.34■■□□□ 1.33
USF3-203ENST00000491165 COX16Q9P0S2 106 aa23.34■■□□□ 1.33
USF3-203ENST00000491165 SAE1Q9UBE0 346 aaPredicted RBP23.34■■□□□ 1.33
USF3-203ENST00000491165 A0A1W2PRU2 124 aa23.33■■□□□ 1.33
USF3-203ENST00000491165 MSI1O43347 362 aaKnown RBP23.33■■□□□ 1.33
USF3-203ENST00000491165 CST8O60676 142 aa23.33■■□□□ 1.33
USF3-203ENST00000491165 WFS1O76024 890 aa23.33■■□□□ 1.33
USF3-203ENST00000491165 KRT4P19013 534 aa23.33■■□□□ 1.33
USF3-203ENST00000491165 SULT1E1P49888 294 aa23.33■■□□□ 1.33
USF3-203ENST00000491165 GDF10P55107 478 aa23.33■■□□□ 1.33
USF3-203ENST00000491165 CYP4F8P98187 520 aa23.33■■□□□ 1.33
USF3-203ENST00000491165 PARP6Q2NL67 630 aa23.33■■□□□ 1.33
USF3-203ENST00000491165 SNX30Q5VWJ9 437 aa23.33■■□□□ 1.33
USF3-203ENST00000491165 LVRNQ6Q4G3 990 aa23.33■■□□□ 1.33
USF3-203ENST00000491165 BBS12Q6ZW61 710 aa23.33■■□□□ 1.33
USF3-203ENST00000491165 RTL10Q7L3V2 364 aa23.33■■□□□ 1.33
USF3-203ENST00000491165 GRASPQ7Z6J2 395 aaPredicted RBP23.33■■□□□ 1.33
USF3-203ENST00000491165 EFHBQ8N7U6 833 aa23.33■■□□□ 1.33
USF3-203ENST00000491165 RSAD2Q8WXG1 361 aa23.33■■□□□ 1.33
USF3-203ENST00000491165 PPP2R3CQ969Q6 453 aa23.33■■□□□ 1.33
USF3-203ENST00000491165 SLC22A12Q96S37 553 aa23.33■■□□□ 1.33
USF3-203ENST00000491165 PIGVQ9NUD9 493 aa23.33■■□□□ 1.33
USF3-203ENST00000491165 CLIC5Q9NZA1 410 aa23.33■■□□□ 1.33
USF3-203ENST00000491165 M0QYT0 321 aa23.33■■□□□ 1.32
USF3-203ENST00000491165 TLR5O60602 858 aa23.33■■□□□ 1.32
USF3-203ENST00000491165 HNRNPA1P09651 372 aaKnown RBP eCLIP23.33■■□□□ 1.32
USF3-203ENST00000491165 IL1R2P27930 398 aa23.33■■□□□ 1.32
USF3-203ENST00000491165 KLHL38Q2WGJ6 581 aa23.33■■□□□ 1.32
USF3-203ENST00000491165 ANKRD22Q5VYY1 191 aa23.33■■□□□ 1.32
USF3-203ENST00000491165 POTEHQ6S545 545 aa23.33■■□□□ 1.32
USF3-203ENST00000491165 TMEM184AQ6ZMB5 413 aa23.33■■□□□ 1.32
USF3-203ENST00000491165 CYP4V2Q6ZWL3 525 aaPredicted RBP23.33■■□□□ 1.32
USF3-203ENST00000491165 ELMOD1Q8N336 334 aa23.33■■□□□ 1.32
USF3-203ENST00000491165 NAT8LQ8N9F0 302 aa23.33■■□□□ 1.32
USF3-203ENST00000491165 C10orf82Q8WW14 230 aa23.33■■□□□ 1.32
USF3-203ENST00000491165 PEBP4Q96S96 227 aa23.33■■□□□ 1.32
USF3-203ENST00000491165 TBX10O75333 385 aa23.32■■□□□ 1.32
USF3-203ENST00000491165 MOSPD3O75425 235 aa23.32■■□□□ 1.32
USF3-203ENST00000491165 IGLV3-25P01717 112 aa23.32■■□□□ 1.32
USF3-203ENST00000491165 RHOP08100 348 aa23.32■■□□□ 1.32
USF3-203ENST00000491165 POU3F3P20264 500 aaPredicted RBP23.32■■□□□ 1.32
USF3-203ENST00000491165 SSTR1P30872 391 aa23.32■■□□□ 1.32
USF3-203ENST00000491165 CLNS1AP54105 237 aaKnown RBP23.32■■□□□ 1.32
USF3-203ENST00000491165 GAD2Q05329 585 aa23.32■■□□□ 1.32
USF3-203ENST00000491165 EIF4EBP2Q13542 120 aaPredicted RBP23.32■■□□□ 1.32
USF3-203ENST00000491165 EFTUD2Q15029 972 aaKnown RBP eCLIP23.32■■□□□ 1.32
USF3-203ENST00000491165 ZC3H12AQ5D1E8 599 aaKnown RBP23.32■■□□□ 1.32
USF3-203ENST00000491165 FNBP1LQ5T0N5 605 aa23.32■■□□□ 1.32
USF3-203ENST00000491165 SYCE2Q6PIF2 218 aa23.32■■□□□ 1.32
USF3-203ENST00000491165 BEND5Q7L4P6 421 aa23.32■■□□□ 1.32
USF3-203ENST00000491165 AGGF1Q8N302 714 aaeCLIP23.32■■□□□ 1.32
USF3-203ENST00000491165 OVCA2Q8WZ82 227 aa23.32■■□□□ 1.32
USF3-203ENST00000491165 ZNF75CPQ92670 426 aaPredicted RBP23.32■■□□□ 1.32
USF3-203ENST00000491165 RNF38Q9H0F5 515 aa23.32■■□□□ 1.32
USF3-203ENST00000491165 ASAH2Q9NR71 780 aa23.32■■□□□ 1.32
USF3-203ENST00000491165 CLEC1BQ9P126 229 aa23.32■■□□□ 1.32
USF3-203ENST00000491165 UXTQ9UBK9 157 aaPredicted RBP23.32■■□□□ 1.32
USF3-203ENST00000491165 I6L893 689 aaPredicted RBP23.32■■□□□ 1.32
USF3-203ENST00000491165 TRUB2O95900 331 aaKnown RBP23.32■■□□□ 1.32
USF3-203ENST00000491165 MYL4P12829 197 aa23.32■■□□□ 1.32
USF3-203ENST00000491165 KDELR1P24390 212 aa23.32■■□□□ 1.32
USF3-203ENST00000491165 TARSP26639 723 aaKnown RBP23.32■■□□□ 1.32
USF3-203ENST00000491165 PSEN1P49768 467 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms