RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 NCKIPSDQ9NZQ3 722 aa7.49□□□□□ -1.21
NPHP3-208ENST00000490993 CYTH4Q9UIA0 394 aa7.49□□□□□ -1.21
NPHP3-208ENST00000490993 DNMT3LQ9UJW3 386 aa7.49□□□□□ -1.21
NPHP3-208ENST00000490993 H0Y626 953 aa7.49□□□□□ -1.21
NPHP3-208ENST00000490993 ITGA2BP08514 1039 aa7.49□□□□□ -1.21
NPHP3-208ENST00000490993 GFAPP14136 432 aa7.49□□□□□ -1.21
NPHP3-208ENST00000490993 CES1P23141 567 aa7.49□□□□□ -1.21
NPHP3-208ENST00000490993 ATP5C1P36542 298 aaKnown RBP7.49□□□□□ -1.21
NPHP3-208ENST00000490993 CREMQ03060 361 aa7.49□□□□□ -1.21
NPHP3-208ENST00000490993 POU6F1Q14863 301 aa7.49□□□□□ -1.21
NPHP3-208ENST00000490993 ECHDC2Q86YB7 292 aa7.49□□□□□ -1.21
NPHP3-208ENST00000490993 ASIC4Q96FT7 647 aa7.49□□□□□ -1.21
NPHP3-208ENST00000490993 SUSD3Q96L08 255 aa7.49□□□□□ -1.21
NPHP3-208ENST00000490993 FCRL2Q96LA5 508 aaPredicted RBP7.49□□□□□ -1.21
NPHP3-208ENST00000490993 HAPLN3Q96S86 360 aa7.49□□□□□ -1.21
NPHP3-208ENST00000490993 OSBPL2Q9H1P3 480 aa7.49□□□□□ -1.21
NPHP3-208ENST00000490993 ABCF3Q9NUQ8 709 aa7.49□□□□□ -1.21
NPHP3-208ENST00000490993 RPL26L1Q9UNX3 145 aaKnown RBP7.49□□□□□ -1.21
NPHP3-208ENST00000490993 FNDC3AQ9Y2H6 1198 aaKnown RBP7.49□□□□□ -1.21
NPHP3-208ENST00000490993 PKP3Q9Y446 797 aa7.49□□□□□ -1.21
NPHP3-208ENST00000490993 COL4A5P29400 1685 aa7.49□□□□□ -1.21
NPHP3-208ENST00000490993 FAM237BA0A1B0GVD1 139 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 USP1O94782 785 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 TMEM63AO94886 807 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 UNC5CO95185 931 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 RPSAP08865 295 aaKnown RBP7.48□□□□□ -1.21
NPHP3-208ENST00000490993 ERVK-10P10266 1014 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 THRAP10827 490 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 IRF1P10914 325 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 MBL2P11226 248 aaPredicted RBP7.48□□□□□ -1.21
NPHP3-208ENST00000490993 MYL4P12829 197 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 TPH1P17752 444 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 SLC5A3P53794 718 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 PRKCZQ05513 592 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 ZNF33AQ06730 810 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 NSUN2Q08J23 767 aaKnown RBP eCLIP7.48□□□□□ -1.21
NPHP3-208ENST00000490993 TIGD5Q53EQ6 642 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 SEL1L3Q68CR1 1132 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 NCBP2-AS2Q69YL0 99 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 C17orf99Q6UX52 265 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 TEX9Q8N6V9 391 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 CLEC4CQ8WTT0 213 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 SKA2Q8WVK7 121 aaPredicted RBP7.48□□□□□ -1.21
NPHP3-208ENST00000490993 ZBTB18Q99592 522 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 BTBD10Q9BSF8 475 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 TSEN34Q9BSV6 310 aaKnown RBP7.48□□□□□ -1.21
NPHP3-208ENST00000490993 NMRAL1Q9HBL8 299 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 VPS45Q9NRW7 570 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 SEPT3Q9UH03 358 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 PLLPQ9Y342 182 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 ZBBXA8MT70 800 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 H0Y3Z8 333 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 ATP6V1G2O95670 118 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 LRG1P02750 347 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 AMHP03971 560 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 IVDP26440 423 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 IKBKEQ14164 716 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 PAFAH1B3Q15102 231 aaKnown RBP7.48□□□□□ -1.21
NPHP3-208ENST00000490993 OSTM1Q86WC4 334 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 TMPRSS6Q8IU80 811 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 BLOC1S5Q8TDH9 187 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 MICAL1Q8TDZ2 1067 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 MRPS31Q92665 395 aaKnown RBP7.48□□□□□ -1.21
NPHP3-208ENST00000490993 BTN2A3PQ96KV6 586 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 PGLYRP2Q96PD5 576 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 PEBP4Q96S96 227 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 NMRK2Q9NPI5 230 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 ARHGAP26Q9UNA1 814 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 FARP1Q9Y4F1 1045 aaPredicted RBP7.48□□□□□ -1.21
NPHP3-208ENST00000490993 STX7O15400 261 aaKnown RBP7.48□□□□□ -1.21
NPHP3-208ENST00000490993 FAM189A1O60320 539 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 ASMTLO95671 621 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 HOXD8P13378 290 aaPredicted RBP7.48□□□□□ -1.21
NPHP3-208ENST00000490993 NDUFV1P49821 464 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 ZNF252P-AS1Q0IIN9 211 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 CDH18Q13634 790 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 KCTD19Q17RG1 926 aaPredicted RBP7.48□□□□□ -1.21
NPHP3-208ENST00000490993 MARCH8Q5T0T0 291 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 MARK2Q7KZI7 788 aaKnown RBP7.48□□□□□ -1.21
NPHP3-208ENST00000490993 SERINC5Q86VE9 423 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 SPATA24Q86W54 205 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 SUGP1Q8IWZ8 645 aaKnown RBP7.48□□□□□ -1.21
NPHP3-208ENST00000490993 ZNF567Q8N184 647 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 LRRC43Q8N309 656 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 LINC01465Q8N7H1 131 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 BANPQ8N9N5 519 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 SMG8Q8ND04 991 aaKnown RBP7.48□□□□□ -1.21
NPHP3-208ENST00000490993 CATSPER1Q8NEC5 780 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 GBP5Q96PP8 586 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 NPY6RQ99463 290 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 MRPL1Q9BYD6 325 aaKnown RBP7.48□□□□□ -1.21
NPHP3-208ENST00000490993 TRIM54Q9BYV2 358 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 GLOD4Q9HC38 313 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 SCOCQ9UIL1 159 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 TNS1Q9HBL0 1735 aaKnown RBP7.48□□□□□ -1.21
NPHP3-208ENST00000490993 YJEFN3A6XGL0 299 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 E7ENQ6 273 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 FCHO1O14526 889 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 ZNF623O75123 536 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 SOAT2O75908 522 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms