RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 ZNF252P-AS1Q0IIN9 211 aa32.23■■■□□ 2.75
LDB1-204ENST00000490751 ELAVL3Q14576 367 aaKnown RBP32.23■■■□□ 2.75
LDB1-204ENST00000490751 ACBD5Q5T8D3 534 aaPredicted RBP32.23■■■□□ 2.75
LDB1-204ENST00000490751 FRS2Q8WU20 508 aa32.23■■■□□ 2.75
LDB1-204ENST00000490751 BIRC7Q96CA5 298 aa32.23■■■□□ 2.75
LDB1-204ENST00000490751 BPIFA3Q9BQP9 254 aa32.23■■■□□ 2.75
LDB1-204ENST00000490751 ZDHHC5Q9C0B5 715 aa32.23■■■□□ 2.75
LDB1-204ENST00000490751 DNAAF2Q9NVR5 837 aaKnown RBP32.23■■■□□ 2.75
LDB1-204ENST00000490751 MPP6Q9NZW5 540 aa32.23■■■□□ 2.75
LDB1-204ENST00000490751 DOCK4Q8N1I0 1966 aa32.23■■■□□ 2.75
LDB1-204ENST00000490751 DRGXA6NNA5 263 aa32.22■■■□□ 2.75
LDB1-204ENST00000490751 E9PAM4 449 aa32.22■■■□□ 2.75
LDB1-204ENST00000490751 RNASEH2AO75792 299 aaKnown RBP32.22■■■□□ 2.75
LDB1-204ENST00000490751 FSBPO95073 299 aa32.22■■■□□ 2.75
LDB1-204ENST00000490751 VASPP50552 380 aaPredicted RBP32.22■■■□□ 2.75
LDB1-204ENST00000490751 PTP4A2Q12974 167 aa32.22■■■□□ 2.75
LDB1-204ENST00000490751 CLEC16AQ2KHT3 1053 aa32.22■■■□□ 2.75
LDB1-204ENST00000490751 LRSAM1Q6UWE0 723 aa32.22■■■□□ 2.75
LDB1-204ENST00000490751 JOSD2Q8TAC2 188 aa32.22■■■□□ 2.75
LDB1-204ENST00000490751 RXFP2Q8WXD0 754 aa32.22■■■□□ 2.75
LDB1-204ENST00000490751 HAPLN3Q96S86 360 aa32.22■■■□□ 2.75
LDB1-204ENST00000490751 OMDQ99983 421 aa32.22■■■□□ 2.75
LDB1-204ENST00000490751 SLC32A1Q9H598 525 aa32.22■■■□□ 2.75
LDB1-204ENST00000490751 SLCO1B1Q9Y6L6 691 aa32.22■■■□□ 2.75
LDB1-204ENST00000490751 UPK3BL1B0FP48 263 aa32.21■■■□□ 2.75
LDB1-204ENST00000490751 UPK3BL2E5RIL1 263 aa32.21■■■□□ 2.75
LDB1-204ENST00000490751 ENDOD1O94919 500 aa32.21■■■□□ 2.75
LDB1-204ENST00000490751 GJB6O95452 261 aa32.21■■■□□ 2.75
LDB1-204ENST00000490751 CDO1Q16878 200 aa32.21■■■□□ 2.75
LDB1-204ENST00000490751 C15orf59Q2T9L4 293 aaPredicted RBP32.21■■■□□ 2.75
LDB1-204ENST00000490751 ACCSLQ4AC99 568 aa32.21■■■□□ 2.75
LDB1-204ENST00000490751 TFAP2DQ7Z6R9 452 aa32.21■■■□□ 2.75
LDB1-204ENST00000490751 PIP4P1Q86T03 277 aa32.21■■■□□ 2.75
LDB1-204ENST00000490751 NEUROG2Q9H2A3 272 aa32.21■■■□□ 2.75
LDB1-204ENST00000490751 SEPT11Q9NVA2 429 aaKnown RBP32.21■■■□□ 2.75
LDB1-204ENST00000490751 ADAM22Q9P0K1 906 aa32.21■■■□□ 2.75
LDB1-204ENST00000490751 IGLV3-10A0A075B6K4 115 aa32.2■■■□□ 2.75
LDB1-204ENST00000490751 FAM47DPA6NHR8 397 aa32.2■■■□□ 2.75
LDB1-204ENST00000490751 TEX33O43247 280 aa32.2■■■□□ 2.75
LDB1-204ENST00000490751 ATP9BO43861 1147 aa32.2■■■□□ 2.75
LDB1-204ENST00000490751 GJB3O75712 270 aa32.2■■■□□ 2.75
LDB1-204ENST00000490751 ADH1BP00325 375 aa32.2■■■□□ 2.75
LDB1-204ENST00000490751 IL1BP01584 269 aa32.2■■■□□ 2.75
LDB1-204ENST00000490751 SDC4P31431 198 aa32.2■■■□□ 2.75
LDB1-204ENST00000490751 RAB6CQ53S08 254 aa32.2■■■□□ 2.75
LDB1-204ENST00000490751 SETD3Q86TU7 594 aaPredicted RBP32.2■■■□□ 2.75
LDB1-204ENST00000490751 AADATQ8N5Z0 425 aa32.2■■■□□ 2.75
LDB1-204ENST00000490751 PSMB7Q99436 277 aa32.2■■■□□ 2.75
LDB1-204ENST00000490751 RAB6CQ9H0N0 254 aa32.2■■■□□ 2.75
LDB1-204ENST00000490751 ADAMTS1Q9UHI8 967 aa32.2■■■□□ 2.75
LDB1-204ENST00000490751 FZD4Q9ULV1 537 aa32.2■■■□□ 2.75
LDB1-204ENST00000490751 C2CD4BA6NLJ0 364 aa32.19■■■□□ 2.74
LDB1-204ENST00000490751 SMTNL1A8MU46 457 aa32.19■■■□□ 2.74
LDB1-204ENST00000490751 SRGAP2O75044 1071 aa32.19■■■□□ 2.74
LDB1-204ENST00000490751 C5AR1P21730 350 aa32.19■■■□□ 2.74
LDB1-204ENST00000490751 DLG2Q15700 870 aa32.19■■■□□ 2.74
LDB1-204ENST00000490751 CCDC14Q49A88 953 aa32.19■■■□□ 2.74
LDB1-204ENST00000490751 ARTNQ5T4W7 220 aa32.19■■■□□ 2.74
LDB1-204ENST00000490751 KIAA0895LQ68EN5 471 aa32.19■■■□□ 2.74
LDB1-204ENST00000490751 PHF13Q86YI8 300 aaPredicted RBP32.19■■■□□ 2.74
LDB1-204ENST00000490751 SH2D3CQ8N5H7 860 aa32.19■■■□□ 2.74
LDB1-204ENST00000490751 CNTNAP3BQ96NU0 1288 aa32.19■■■□□ 2.74
LDB1-204ENST00000490751 AGPAT1Q99943 283 aa32.19■■■□□ 2.74
LDB1-204ENST00000490751 CNTNAP3Q9BZ76 1288 aa32.19■■■□□ 2.74
LDB1-204ENST00000490751 SNAP91O60641 907 aa32.18■■■□□ 2.74
LDB1-204ENST00000490751 CALB1P05937 261 aa32.18■■■□□ 2.74
LDB1-204ENST00000490751 CD59P13987 128 aa32.18■■■□□ 2.74
LDB1-204ENST00000490751 CD27P26842 260 aa32.18■■■□□ 2.74
LDB1-204ENST00000490751 GALCP54803 685 aa32.18■■■□□ 2.74
LDB1-204ENST00000490751 GSCP56915 257 aaPredicted RBP32.18■■■□□ 2.74
LDB1-204ENST00000490751 KRT83P78385 493 aa32.18■■■□□ 2.74
LDB1-204ENST00000490751 BNC1Q01954 994 aa32.18■■■□□ 2.74
LDB1-204ENST00000490751 C6orf118Q5T5N4 469 aa32.18■■■□□ 2.74
LDB1-204ENST00000490751 OR8D1Q8WZ84 308 aa32.18■■■□□ 2.74
LDB1-204ENST00000490751 C2orf49Q9BVC5 232 aaPredicted RBP32.18■■■□□ 2.74
LDB1-204ENST00000490751 TM9SF3Q9HD45 589 aa32.18■■■□□ 2.74
LDB1-204ENST00000490751 ANGPTL2Q9UKU9 493 aa32.18■■■□□ 2.74
LDB1-204ENST00000490751 PLXNA2O75051 1894 aa32.18■■■□□ 2.74
LDB1-204ENST00000490751 A0A1B0GVT2 93 aa32.17■■■□□ 2.74
LDB1-204ENST00000490751 IGHV4-34P06331 123 aa32.17■■■□□ 2.74
LDB1-204ENST00000490751 KRT3P12035 628 aa32.17■■■□□ 2.74
LDB1-204ENST00000490751 FERP16591 822 aa32.17■■■□□ 2.74
LDB1-204ENST00000490751 PTPN9P43378 593 aa32.17■■■□□ 2.74
LDB1-204ENST00000490751 CSNK1EP49674 416 aaKnown RBP32.17■■■□□ 2.74
LDB1-204ENST00000490751 AFF3P51826 1226 aaKnown RBP32.17■■■□□ 2.74
LDB1-204ENST00000490751 NCEH1Q6PIU2 408 aa32.17■■■□□ 2.74
LDB1-204ENST00000490751 Q6ZVU0 165 aa32.17■■■□□ 2.74
LDB1-204ENST00000490751 SELENOOQ9BVL4 669 aa32.17■■■□□ 2.74
LDB1-204ENST00000490751 ZYG11BQ9C0D3 744 aa32.17■■■□□ 2.74
LDB1-204ENST00000490751 OSGEPQ9NPF4 335 aa32.17■■■□□ 2.74
LDB1-204ENST00000490751 RTN4Q9NQC3 1192 aaKnown RBP32.17■■■□□ 2.74
LDB1-204ENST00000490751 VPS51Q9UID3 782 aa32.17■■■□□ 2.74
LDB1-204ENST00000490751 HS3ST2Q9Y278 367 aa32.17■■■□□ 2.74
LDB1-204ENST00000490751 A0A0D9SEW6 157 aa32.16■■■□□ 2.74
LDB1-204ENST00000490751 LRRC72A6NJI9 287 aa32.16■■■□□ 2.74
LDB1-204ENST00000490751 SRCP12931 536 aa32.16■■■□□ 2.74
LDB1-204ENST00000490751 GOT1P17174 413 aa32.16■■■□□ 2.74
LDB1-204ENST00000490751 OR1E1P30953 314 aa32.16■■■□□ 2.74
LDB1-204ENST00000490751 ZNF165P49910 485 aa32.16■■■□□ 2.74
LDB1-204ENST00000490751 SLC14A1Q13336 389 aa32.16■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms