RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 BTF3P20290 206 aaKnown RBP3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 ATP6V1E1P36543 226 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 LIPAP38571 399 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 HARS2P49590 506 aaKnown RBP3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 PPP2R5BQ15173 497 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 MAPKAPK3Q16644 382 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 TMEM266Q2M3C6 531 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 GALNTL6Q49A17 601 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 FAM69AQ5T7M9 428 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 TTC22Q5TAA0 569 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 EMC10Q5UCC4 262 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 FCRL6Q6DN72 434 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 SUMO4Q6EEV6 95 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 DCLRE1AQ6PJP8 1040 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 MAVSQ7Z434 540 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 CPLX4Q7Z7G2 160 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 GATAD2AQ86YP4 633 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 DIS3L2Q8IYB7 885 aaKnown RBP3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 OR8H3Q8N146 312 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 TMEM57Q8N5G2 664 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 ARL6IP6Q8N6S5 226 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 RAPGEF4Q8WZA2 1011 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 DDX17Q92841 729 aaKnown RBP3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 JAKMIP2Q96AA8 810 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 REPS1Q96D71 796 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 FAM120BQ96EK7 910 aaKnown RBP3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 APOPT1Q96IL0 206 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 FAM167AQ96KS9 214 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 SNX27Q96L92 541 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 FNBP1Q96RU3 617 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 NCAPGQ9BPX3 1015 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 HERC2P3Q9BVR0 1158 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 ST6GALNAC4Q9H4F1 302 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 G6PC2Q9NQR9 355 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 TLR8Q9NR97 1041 aaKnown RBP3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 DIAPH3Q9NSV4 1193 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 HESX1Q9UBX0 185 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 SERTAD3Q9UJW9 196 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 ODF2LQ9ULJ1 636 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 TBX20Q9UMR3 447 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 RCE1Q9Y256 329 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 DTNAQ9Y4J8 743 aa3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 ZFP37Q9Y6Q3 630 aaPredicted RBP3.44□□□□□ -1.86
DEPDC1-204ENST00000489862 NUP153P49790 1475 aaKnown RBP3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 PTGES3LE9PB15 166 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 H0Y626 953 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 H0YIZ8 118 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 H7C4K7 107 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 ZNF213O14771 459 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 VILLO15195 856 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 TBC1D4O60343 1298 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 NXPH3O95157 252 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 CLEC3BP05452 202 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 ARP10275 920 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 CPA1P15085 419 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 IL1R2P27930 398 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 EPHA8P29322 1005 aaPredicted RBP3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 AKT1P31749 480 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 SLC11A2P49281 568 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 AARSP49588 968 aaKnown RBP eCLIP3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 PDE6CP51160 858 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 UCP3P55916 312 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 LILRA4P59901 499 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 RPS3AP61247 264 aaKnown RBP3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 UBXN2AP68543 259 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 PPA1Q15181 289 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 PTPN14Q15678 1187 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 TREML2Q5T2D2 321 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 ZNF618Q5T7W0 954 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 CEP85Q6P2H3 762 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 ALKBH5Q6P6C2 394 aaKnown RBP3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 IKBIPQ70UQ0 350 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 DTX2Q86UW9 622 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 ARMC8Q8IUR7 673 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 LINC00346Q8IVM7 164 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 BRSK2Q8IWQ3 736 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 WDTC1Q8N5D0 677 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 DNAJC5GQ8N7S2 189 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 LINS1Q8NG48 757 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 OR6Y1Q8NGX8 325 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 HIC2Q96JB3 615 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 FCRL4Q96PJ5 515 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 ABHD1Q96SE0 405 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 WACQ9BTA9 647 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 ZNF518BQ9C0D4 1074 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 TP63Q9H3D4 680 aaPredicted RBP3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 COQ3Q9NZJ6 369 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 FLRT1Q9NZU1 646 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 WDR35Q9P2L0 1181 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 MAFFQ9ULX9 164 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 RABL2BQ9UNT1 228 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 SSX2IPQ9Y2D8 614 aa3.43□□□□□ -1.86
DEPDC1-204ENST00000489862 MAPKBP1O60336 1514 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 A0A087WWL8 130 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 A0A1W2PQ09 198 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 NPIPB15A6NHN6 443 aaPredicted RBP3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 KRTAP9-6A8MVA2 160 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 SMIM22K7EJ46 135 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 CLGNO14967 610 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms