RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 LRRC42Q9Y546 428 aa16.05■□□□□ 0.16
BRD9-208ENST00000489816 DPPA5A6NC42 116 aa16.05■□□□□ 0.16
BRD9-208ENST00000489816 PMPCBO75439 489 aa16.05■□□□□ 0.16
BRD9-208ENST00000489816 HSPA4LO95757 839 aa16.05■□□□□ 0.16
BRD9-208ENST00000489816 C2P06681 752 aa16.05■□□□□ 0.16
BRD9-208ENST00000489816 IDH3AP50213 366 aa16.05■□□□□ 0.16
BRD9-208ENST00000489816 CFAP157Q5JU67 520 aa16.05■□□□□ 0.16
BRD9-208ENST00000489816 KYAT3Q6YP21 454 aaKnown RBP16.05■□□□□ 0.16
BRD9-208ENST00000489816 DENND6AQ8IWF6 608 aa16.05■□□□□ 0.16
BRD9-208ENST00000489816 RNF148Q8N7C7 305 aa16.05■□□□□ 0.16
BRD9-208ENST00000489816 ENDOVQ8N8Q3 282 aaKnown RBP16.05■□□□□ 0.16
BRD9-208ENST00000489816 FTHL17Q9BXU8 183 aa16.05■□□□□ 0.16
BRD9-208ENST00000489816 NDFIP2Q9NV92 336 aa16.05■□□□□ 0.16
BRD9-208ENST00000489816 TTC24A2A3L6 582 aaPredicted RBP16.04■□□□□ 0.16
BRD9-208ENST00000489816 HACD1B0YJ81 288 aa16.04■□□□□ 0.16
BRD9-208ENST00000489816 SERPINB5P36952 375 aa16.04■□□□□ 0.16
BRD9-208ENST00000489816 GLUD2P49448 558 aa16.04■□□□□ 0.16
BRD9-208ENST00000489816 SCYL1Q96KG9 808 aa16.04■□□□□ 0.16
BRD9-208ENST00000489816 TMLHEQ9NVH6 421 aa16.04■□□□□ 0.16
BRD9-208ENST00000489816 PLXNB2O15031 1838 aa16.04■□□□□ 0.16
BRD9-208ENST00000489816 EME2A4GXA9 379 aaPredicted RBP16.04■□□□□ 0.16
BRD9-208ENST00000489816 MAP3K13O43283 966 aa16.04■□□□□ 0.16
BRD9-208ENST00000489816 THP07101 528 aa16.04■□□□□ 0.16
BRD9-208ENST00000489816 ZNF865P0CJ78 1059 aaPredicted RBP16.04■□□□□ 0.16
BRD9-208ENST00000489816 SLC34A1Q06495 639 aa16.04■□□□□ 0.16
BRD9-208ENST00000489816 PCSK7Q16549 785 aa16.04■□□□□ 0.16
BRD9-208ENST00000489816 TSNAXIP1Q2TAA8 658 aa16.04■□□□□ 0.16
BRD9-208ENST00000489816 SLC9B1Q4ZJI4 515 aa16.04■□□□□ 0.16
BRD9-208ENST00000489816 STEAP4Q687X5 459 aa16.04■□□□□ 0.16
BRD9-208ENST00000489816 CAPRIN2Q6IMN6 1127 aaKnown RBP16.04■□□□□ 0.16
BRD9-208ENST00000489816 MAB21L3Q8N8X9 362 aa16.04■□□□□ 0.16
BRD9-208ENST00000489816 TUBB6Q9BUF5 446 aa16.04■□□□□ 0.16
BRD9-208ENST00000489816 AGO3Q9H9G7 860 aaKnown RBP16.04■□□□□ 0.16
BRD9-208ENST00000489816 FAM105AQ9NUU6 356 aa16.04■□□□□ 0.16
BRD9-208ENST00000489816 MPP6Q9NZW5 540 aa16.04■□□□□ 0.16
BRD9-208ENST00000489816 DLGAP2Q9P1A6 1054 aa16.04■□□□□ 0.16
BRD9-208ENST00000489816 DCDC2Q9UHG0 476 aa16.04■□□□□ 0.16
BRD9-208ENST00000489816 ZCWPW2A0A1B0GU75 182 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 SERPINE1P05121 402 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 ITGB1P05556 798 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 UBTFL6P0CB48 400 aaPredicted RBP16.03■□□□□ 0.16
BRD9-208ENST00000489816 WARSP23381 471 aaKnown RBP16.03■□□□□ 0.16
BRD9-208ENST00000489816 FSCN1Q16658 493 aaKnown RBP16.03■□□□□ 0.16
BRD9-208ENST00000489816 FAM110CQ1W6H9 321 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 KCNMB4Q86W47 210 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 RNF135Q8IUD6 432 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 CNTD1Q8N815 330 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 SLC26A7Q8TE54 656 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 ZNF419Q96HQ0 510 aaPredicted RBP16.03■□□□□ 0.16
BRD9-208ENST00000489816 PPP1R10Q96QC0 940 aaKnown RBP16.03■□□□□ 0.16
BRD9-208ENST00000489816 PARK7Q99497 189 aaKnown RBP16.03■□□□□ 0.16
BRD9-208ENST00000489816 TASP1Q9H6P5 420 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 LRRC40Q9H9A6 602 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 COG4Q9H9E3 785 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 FBXW11Q9UKB1 542 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 ARL5CA6NH57 179 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 SERPINA6P08185 405 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 HOXD8P13378 290 aaPredicted RBP16.03■□□□□ 0.16
BRD9-208ENST00000489816 ARSAP15289 507 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 VHLP40337 213 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 CHRNA4P43681 627 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 CRYBB1P53674 252 aaPredicted RBP16.03■□□□□ 0.16
BRD9-208ENST00000489816 ADAM17P78536 824 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 MPP3Q13368 585 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 GRM3Q14832 879 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 GPR162Q16538 588 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 TMEM154Q6P9G4 183 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 C4orf22Q6V702 233 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 RPS27LQ71UM5 84 aaKnown RBP16.03■□□□□ 0.16
BRD9-208ENST00000489816 ZNF467Q7Z7K2 595 aaPredicted RBP16.03■□□□□ 0.16
BRD9-208ENST00000489816 TAC4Q86UU9 113 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 URGCPQ8TCY9 931 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 NT5C3BQ969T7 300 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 MYLPFQ96A32 169 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 ZNF333Q96JL9 665 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 OR52B2Q96RD2 323 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 BIRC5O15392 142 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 CIB2O75838 187 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 VAPBO95292 243 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 EPHA3P29320 983 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 ABCE1P61221 599 aaKnown RBP16.03■□□□□ 0.16
BRD9-208ENST00000489816 TUBB3Q13509 450 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 CUL3Q13618 768 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 PAFAH1B3Q15102 231 aaKnown RBP16.03■□□□□ 0.16
BRD9-208ENST00000489816 PDPK2PQ6A1A2 396 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 HPS6Q86YV9 775 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 TOP6BLQ8N6T0 577 aa16.03■□□□□ 0.16
BRD9-208ENST00000489816 GLTPD2A6NH11 291 aa16.02■□□□□ 0.16
BRD9-208ENST00000489816 ENO4A6NNW6 628 aa16.02■□□□□ 0.16
BRD9-208ENST00000489816 CCL22O00626 93 aa16.02■□□□□ 0.16
BRD9-208ENST00000489816 HNRNPCL1O60812 293 aaKnown RBP16.02■□□□□ 0.16
BRD9-208ENST00000489816 AP2A1O95782 977 aa16.02■□□□□ 0.16
BRD9-208ENST00000489816 GSTA2P09210 222 aa16.02■□□□□ 0.16
BRD9-208ENST00000489816 ZCCHC18P0CG32 403 aa16.02■□□□□ 0.16
BRD9-208ENST00000489816 MLNP12872 115 aa16.02■□□□□ 0.16
BRD9-208ENST00000489816 ATP6V1C1P21283 382 aa16.02■□□□□ 0.16
BRD9-208ENST00000489816 MPSTP25325 297 aa16.02■□□□□ 0.16
BRD9-208ENST00000489816 MPP1Q00013 466 aa16.02■□□□□ 0.16
BRD9-208ENST00000489816 TMEM198Q66K66 360 aa16.02■□□□□ 0.16
BRD9-208ENST00000489816 NXNQ6DKJ4 435 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms