RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 SLC6A11P48066 632 aa11.17□□□□□ -0.62
TFF3-203ENST00000489676 DGKGP49619 791 aa11.17□□□□□ -0.62
TFF3-203ENST00000489676 OXCT1P55809 520 aa11.17□□□□□ -0.62
TFF3-203ENST00000489676 DYNLT1P63172 113 aa11.17□□□□□ -0.62
TFF3-203ENST00000489676 GALNT2Q10471 571 aa11.17□□□□□ -0.62
TFF3-203ENST00000489676 ZNF177Q13360 481 aaPredicted RBP11.17□□□□□ -0.62
TFF3-203ENST00000489676 SLC12A1Q13621 1099 aa11.17□□□□□ -0.62
TFF3-203ENST00000489676 NOMO1Q15155 1222 aa11.17□□□□□ -0.62
TFF3-203ENST00000489676 GEN1Q17RS7 908 aa11.17□□□□□ -0.62
TFF3-203ENST00000489676 PARP15Q460N3 678 aa11.17□□□□□ -0.62
TFF3-203ENST00000489676 TMEM215Q68D42 235 aa11.17□□□□□ -0.62
TFF3-203ENST00000489676 GRAMD4Q6IC98 578 aa11.17□□□□□ -0.62
TFF3-203ENST00000489676 ADIPOR2Q86V24 386 aa11.17□□□□□ -0.62
TFF3-203ENST00000489676 RALGPS2Q86X27 583 aaPredicted RBP11.17□□□□□ -0.62
TFF3-203ENST00000489676 SFTPA1Q8IWL2 248 aa11.17□□□□□ -0.62
TFF3-203ENST00000489676 DCAF4L2Q8NA75 395 aa11.17□□□□□ -0.62
TFF3-203ENST00000489676 NETO2Q8NC67 525 aa11.17□□□□□ -0.62
TFF3-203ENST00000489676 OR7D4Q8NG98 312 aa11.17□□□□□ -0.62
TFF3-203ENST00000489676 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.17□□□□□ -0.62
TFF3-203ENST00000489676 EZH1Q92800 747 aaPredicted RBP11.17□□□□□ -0.62
TFF3-203ENST00000489676 CELF6Q96J87 481 aaKnown RBP11.17□□□□□ -0.62
TFF3-203ENST00000489676 MS4A14Q96JA4 679 aa11.17□□□□□ -0.62
TFF3-203ENST00000489676 XPO6Q96QU8 1125 aaKnown RBP11.17□□□□□ -0.62
TFF3-203ENST00000489676 FEM1AQ9BSK4 669 aa11.17□□□□□ -0.62
TFF3-203ENST00000489676 ACE2Q9BYF1 805 aaPredicted RBP11.17□□□□□ -0.62
TFF3-203ENST00000489676 SLC39A8Q9C0K1 460 aa11.17□□□□□ -0.62
TFF3-203ENST00000489676 MAGEH1Q9H213 219 aa11.17□□□□□ -0.62
TFF3-203ENST00000489676 DEC1Q9P2X7 70 aa11.17□□□□□ -0.62
TFF3-203ENST00000489676 SAE1Q9UBE0 346 aaPredicted RBP11.17□□□□□ -0.62
TFF3-203ENST00000489676 MUTYHQ9UIF7 546 aa11.17□□□□□ -0.62
TFF3-203ENST00000489676 GGA2Q9UJY4 613 aa11.17□□□□□ -0.62
TFF3-203ENST00000489676 R3HDM2Q9Y2K5 976 aaKnown RBP11.17□□□□□ -0.62
TFF3-203ENST00000489676 RAD54BQ9Y620 910 aa11.17□□□□□ -0.62
TFF3-203ENST00000489676 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.16□□□□□ -0.62
TFF3-203ENST00000489676 PRRT4C9JH25 899 aa11.16□□□□□ -0.62
TFF3-203ENST00000489676 PDE2AO00408 941 aaPredicted RBP11.16□□□□□ -0.62
TFF3-203ENST00000489676 ZMPSTE24O75844 475 aa11.16□□□□□ -0.62
TFF3-203ENST00000489676 ETFBP38117 255 aa11.16□□□□□ -0.62
TFF3-203ENST00000489676 GARSP41250 739 aaKnown RBP11.16□□□□□ -0.62
TFF3-203ENST00000489676 NR2C2P49116 596 aa11.16□□□□□ -0.62
TFF3-203ENST00000489676 KDSRQ06136 332 aa11.16□□□□□ -0.62
TFF3-203ENST00000489676 SERINC3Q13530 473 aa11.16□□□□□ -0.62
TFF3-203ENST00000489676 PITRM1Q5JRX3 1037 aa11.16□□□□□ -0.62
TFF3-203ENST00000489676 RNF219Q5W0B1 726 aaPredicted RBP11.16□□□□□ -0.62
TFF3-203ENST00000489676 UBALD2Q8IYN6 164 aa11.16□□□□□ -0.62
TFF3-203ENST00000489676 APCDD1Q8J025 514 aa11.16□□□□□ -0.62
TFF3-203ENST00000489676 AHI1Q8N157 1196 aa11.16□□□□□ -0.62
TFF3-203ENST00000489676 SLC35B2Q8TB61 432 aa11.16□□□□□ -0.62
TFF3-203ENST00000489676 ACTL9Q8TC94 416 aa11.16□□□□□ -0.62
TFF3-203ENST00000489676 WFIKKN2Q8TEU8 576 aa11.16□□□□□ -0.62
TFF3-203ENST00000489676 HAUS1Q96CS2 278 aa11.16□□□□□ -0.62
TFF3-203ENST00000489676 HDAC11Q96DB2 347 aa11.16□□□□□ -0.62
TFF3-203ENST00000489676 ZNF419Q96HQ0 510 aaPredicted RBP11.16□□□□□ -0.62
TFF3-203ENST00000489676 UHRF1Q96T88 793 aaPredicted RBP11.16□□□□□ -0.62
TFF3-203ENST00000489676 MAK16Q9BXY0 300 aaKnown RBP11.16□□□□□ -0.62
TFF3-203ENST00000489676 PDFQ9HBH1 243 aa11.16□□□□□ -0.62
TFF3-203ENST00000489676 FBRSL1Q9HCM7 1045 aaKnown RBP11.16□□□□□ -0.62
TFF3-203ENST00000489676 KIAA1522Q9P206 1035 aaPredicted RBP11.16□□□□□ -0.62
TFF3-203ENST00000489676 VPS51Q9UID3 782 aa11.16□□□□□ -0.62
TFF3-203ENST00000489676 A0A0A0MRY4 1105 aa11.15□□□□□ -0.62
TFF3-203ENST00000489676 CXorf51AA0A1B0GTR3 108 aa11.15□□□□□ -0.62
TFF3-203ENST00000489676 KRBA1A5PL33 1030 aa11.15□□□□□ -0.62
TFF3-203ENST00000489676 ARHGAP42A6NI28 874 aa11.15□□□□□ -0.62
TFF3-203ENST00000489676 DFFAO00273 331 aa11.15□□□□□ -0.62
TFF3-203ENST00000489676 SNAP91O60641 907 aa11.15□□□□□ -0.62
TFF3-203ENST00000489676 KAT7O95251 611 aa11.15□□□□□ -0.62
TFF3-203ENST00000489676 CD160O95971 181 aa11.15□□□□□ -0.62
TFF3-203ENST00000489676 PEX11BO96011 259 aa11.15□□□□□ -0.62
TFF3-203ENST00000489676 GLDCP23378 1020 aa11.15□□□□□ -0.62
TFF3-203ENST00000489676 PAPOLAP51003 745 aaKnown RBP11.15□□□□□ -0.62
TFF3-203ENST00000489676 ARF5P84085 180 aa11.15□□□□□ -0.62
TFF3-203ENST00000489676 OTUD4Q01804 1114 aaKnown RBP11.15□□□□□ -0.62
TFF3-203ENST00000489676 DMC1Q14565 340 aa11.15□□□□□ -0.62
TFF3-203ENST00000489676 POLD3Q15054 466 aaPredicted RBP11.15□□□□□ -0.62
TFF3-203ENST00000489676 EIF4HQ15056 248 aaKnown RBP11.15□□□□□ -0.62
TFF3-203ENST00000489676 PRKD1Q15139 912 aaPredicted RBP11.15□□□□□ -0.62
TFF3-203ENST00000489676 MLF2Q15773 248 aaPredicted RBP11.15□□□□□ -0.62
TFF3-203ENST00000489676 CYP1B1Q16678 543 aa11.15□□□□□ -0.62
TFF3-203ENST00000489676 LONRF2Q1L5Z9 754 aa11.15□□□□□ -0.62
TFF3-203ENST00000489676 SLC44A4Q53GD3 710 aa11.15□□□□□ -0.62
TFF3-203ENST00000489676 TMEM196Q5HYL7 178 aa11.15□□□□□ -0.62
TFF3-203ENST00000489676 C1orf228Q6PIY5 440 aa11.15□□□□□ -0.62
TFF3-203ENST00000489676 ARHGAP36Q6ZRI8 547 aa11.15□□□□□ -0.62
TFF3-203ENST00000489676 TPRG1Q6ZUI0 275 aa11.15□□□□□ -0.62
TFF3-203ENST00000489676 ZNF572Q7Z3I7 529 aaPredicted RBP11.15□□□□□ -0.62
TFF3-203ENST00000489676 SUGP1Q8IWZ8 645 aaKnown RBP11.15□□□□□ -0.62
TFF3-203ENST00000489676 ZNF687Q8N1G0 1237 aa11.15□□□□□ -0.62
TFF3-203ENST00000489676 CCDC33Q8N5R6 958 aa11.15□□□□□ -0.62
TFF3-203ENST00000489676 PRELID2Q8N945 189 aa11.15□□□□□ -0.62
TFF3-203ENST00000489676 KIF18AQ8NI77 898 aa11.15□□□□□ -0.62
TFF3-203ENST00000489676 ATG4AQ8WYN0 398 aa11.15□□□□□ -0.62
TFF3-203ENST00000489676 P3H4Q92791 437 aa11.15□□□□□ -0.62
TFF3-203ENST00000489676 NKD2Q969F2 451 aaPredicted RBP11.15□□□□□ -0.62
TFF3-203ENST00000489676 TTC17Q96AE7 1141 aa11.15□□□□□ -0.62
TFF3-203ENST00000489676 TSGA13Q96PP4 275 aa11.15□□□□□ -0.62
TFF3-203ENST00000489676 QKIQ96PU8 341 aaKnown RBP eCLIP11.15□□□□□ -0.62
TFF3-203ENST00000489676 PNKPQ96T60 521 aa11.15□□□□□ -0.62
TFF3-203ENST00000489676 P2RY13Q9BPV8 354 aa11.15□□□□□ -0.62
TFF3-203ENST00000489676 C1QTNF1Q9BXJ1 281 aa11.15□□□□□ -0.62
TFF3-203ENST00000489676 MUC3BQ9H195 1237 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms