RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 RASA4BC9J798 803 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 DLL1O00548 723 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 TNFRSF10BO14763 440 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 TP73O15350 636 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 PRPF4O43172 522 aaKnown RBP eCLIP6.52□□□□□ -1.37
SF3A3-208ENST00000489537 RASA4O43374 803 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 NBNO60934 754 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 BEST1O76090 585 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 DDHD2O94830 711 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 FGF19O95750 216 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 LATS1O95835 1130 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 POLBP06746 335 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 APRTP07741 180 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 GALTP07902 379 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 HAPLN1P10915 354 aaPredicted RBP6.52□□□□□ -1.37
SF3A3-208ENST00000489537 CSF2RAP15509 400 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 RHOQP17081 205 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 ERCC2P18074 760 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 GARSP41250 739 aaKnown RBP6.52□□□□□ -1.37
SF3A3-208ENST00000489537 ALDH1A3P47895 512 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 IFNAR2P48551 515 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 POLD2P49005 469 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 MAPKAPK2P49137 400 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 RENBPP51606 427 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 MLLT6P55198 1093 aaPredicted RBP6.52□□□□□ -1.37
SF3A3-208ENST00000489537 YBEYP58557 167 aaPredicted RBP6.52□□□□□ -1.37
SF3A3-208ENST00000489537 SRSF11Q05519 484 aaKnown RBP6.52□□□□□ -1.37
SF3A3-208ENST00000489537 GALNT2Q10471 571 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 AP1B1Q10567 949 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 BTG3Q14201 252 aaPredicted RBP6.52□□□□□ -1.37
SF3A3-208ENST00000489537 MBTPS1Q14703 1052 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 GPNMBQ14956 572 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 GRIN2CQ14957 1233 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 LLGL1Q15334 1064 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 TRIP4Q15650 581 aaPredicted RBP6.52□□□□□ -1.37
SF3A3-208ENST00000489537 SLC14A2Q15849 920 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 CCDC142Q17RM4 750 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 TCTN1Q2MV58 587 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 TEX44Q53QW1 395 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 ANKRD20A2Q5SQ80 823 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 TMEM240Q5SV17 173 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 ANKRD20A1Q5TYW2 823 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 RASIP1Q5U651 963 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 TTC39BQ5VTQ0 682 aaPredicted RBP6.52□□□□□ -1.37
SF3A3-208ENST00000489537 ANKRD20A3Q5VUR7 823 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 SNX30Q5VWJ9 437 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 SLC8B1Q6J4K2 584 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 ELMSAN1Q6PJG2 1045 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 CD300LGQ6UXG3 332 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 YTHDF3Q7Z739 585 aaKnown RBP6.52□□□□□ -1.37
SF3A3-208ENST00000489537 CPLX4Q7Z7G2 160 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 ITIH5Q86UX2 942 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 LCA5Q86VQ0 697 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 SLC26A11Q86WA9 606 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 ZNF280BQ86YH2 543 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 CMTR2Q8IYT2 770 aaKnown RBP6.52□□□□□ -1.37
SF3A3-208ENST00000489537 ATPAF2Q8N5M1 289 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 FBXO36Q8NEA4 188 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 OR10T2Q8NGX3 314 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 GSDMBQ8TAX9 411 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 ACMSDQ8TDX5 336 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 CLEC4CQ8WTT0 213 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 SREK1Q8WXA9 508 aaKnown RBP6.52□□□□□ -1.37
SF3A3-208ENST00000489537 TTC17Q96AE7 1141 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 ACSF2Q96CM8 615 aaPredicted RBP6.52□□□□□ -1.37
SF3A3-208ENST00000489537 CABS1Q96KC9 395 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 C9orf72Q96LT7 481 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 ZNF558Q96NG5 402 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 SELENOSQ9BQE4 189 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 LBHD1Q9BQE6 289 aaPredicted RBP6.52□□□□□ -1.37
SF3A3-208ENST00000489537 TTLL2Q9BWV7 592 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 PPP1R12CQ9BZL4 782 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 IQCGQ9H095 443 aaKnown RBP6.52□□□□□ -1.37
SF3A3-208ENST00000489537 MTIF3Q9H2K0 278 aaKnown RBP6.52□□□□□ -1.37
SF3A3-208ENST00000489537 EPB41L4BQ9H329 900 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 ETNK1Q9HBU6 452 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 LRRC4CQ9HCJ2 640 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 VPS45Q9NRW7 570 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 TMEM39AQ9NV64 488 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 ABI2Q9NYB9 513 aaPredicted RBP6.52□□□□□ -1.37
SF3A3-208ENST00000489537 KLHL8Q9P2G9 620 aaPredicted RBP6.52□□□□□ -1.37
SF3A3-208ENST00000489537 TXNDC16Q9P2K2 825 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 MTRRQ9UBK8 725 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 ZC3H7BQ9UGR2 993 aaKnown RBP6.52□□□□□ -1.37
SF3A3-208ENST00000489537 AFF4Q9UHB7 1163 aaKnown RBP6.52□□□□□ -1.37
SF3A3-208ENST00000489537 ZMYM5Q9UJ78 669 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 PRG3Q9Y2Y8 225 aaPredicted RBP6.52□□□□□ -1.37
SF3A3-208ENST00000489537 RWDD3Q9Y3V2 267 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 ASB3Q9Y575 518 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 MYO9BQ13459 2157 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 TET1Q8NFU7 2136 aa6.52□□□□□ -1.37
SF3A3-208ENST00000489537 TRIP12Q14669 1992 aaPredicted RBP6.51□□□□□ -1.37
SF3A3-208ENST00000489537 SCN5AQ14524 2016 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 TYW5A2RUC4 315 aaKnown RBP6.51□□□□□ -1.37
SF3A3-208ENST00000489537 KCNU1A8MYU2 1149 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 RNF103O00237 685 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 MATN3O15232 486 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 TBC1D4O60343 1298 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 SUN1O94901 812 aa6.51□□□□□ -1.37
SF3A3-208ENST00000489537 TIMP1P01033 207 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms