RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 FMO5P49326 533 aa11.72□□□□□ -0.53
SNU13-208ENST00000488571 ARRB1P49407 418 aaPredicted RBP11.72□□□□□ -0.53
SNU13-208ENST00000488571 NUMBP49757 651 aa11.72□□□□□ -0.53
SNU13-208ENST00000488571 ELAVL3Q14576 367 aaKnown RBP11.72□□□□□ -0.53
SNU13-208ENST00000488571 STILQ15468 1287 aa11.72□□□□□ -0.53
SNU13-208ENST00000488571 RAP1GAP2Q684P5 730 aa11.72□□□□□ -0.53
SNU13-208ENST00000488571 NAPEPLDQ6IQ20 393 aa11.72□□□□□ -0.53
SNU13-208ENST00000488571 LGI2Q8N0V4 545 aa11.72□□□□□ -0.53
SNU13-208ENST00000488571 SNIP1Q8TAD8 396 aaKnown RBP11.72□□□□□ -0.53
SNU13-208ENST00000488571 FRS2Q8WU20 508 aa11.72□□□□□ -0.53
SNU13-208ENST00000488571 NT5C1BQ96P26 610 aa11.72□□□□□ -0.53
SNU13-208ENST00000488571 CYTH4Q9UIA0 394 aa11.72□□□□□ -0.53
SNU13-208ENST00000488571 SARDHQ9UL12 918 aa11.72□□□□□ -0.53
SNU13-208ENST00000488571 AK5Q9Y6K8 562 aa11.72□□□□□ -0.53
SNU13-208ENST00000488571 TBC1D3DA0A087WVF3 549 aa11.71□□□□□ -0.53
SNU13-208ENST00000488571 TBC1D3IA0A087WXS9 549 aa11.71□□□□□ -0.53
SNU13-208ENST00000488571 TBC1D3EA0A087X179 549 aa11.71□□□□□ -0.53
SNU13-208ENST00000488571 TBC1D3KA0A087X1G2 549 aa11.71□□□□□ -0.53
SNU13-208ENST00000488571 TBC1D3FA6NER0 549 aaPredicted RBP11.71□□□□□ -0.53
SNU13-208ENST00000488571 TBC1D3LB9A6J9 549 aa11.71□□□□□ -0.53
SNU13-208ENST00000488571 PMM2O15305 246 aa11.71□□□□□ -0.53
SNU13-208ENST00000488571 RTN2O75298 545 aa11.71□□□□□ -0.53
SNU13-208ENST00000488571 MOCS3O95396 460 aa11.71□□□□□ -0.53
SNU13-208ENST00000488571 IL1BP01584 269 aa11.71□□□□□ -0.53
SNU13-208ENST00000488571 IGLV3-25P01717 112 aa11.71□□□□□ -0.53
SNU13-208ENST00000488571 TBC1D3HP0C7X1 549 aa11.71□□□□□ -0.53
SNU13-208ENST00000488571 CKMT2P17540 419 aa11.71□□□□□ -0.53
SNU13-208ENST00000488571 TACR2P21452 398 aa11.71□□□□□ -0.53
SNU13-208ENST00000488571 GPD2P43304 727 aa11.71□□□□□ -0.53
SNU13-208ENST00000488571 PITX1P78337 314 aaPredicted RBP11.71□□□□□ -0.53
SNU13-208ENST00000488571 C19orf57Q0VDD7 668 aa11.71□□□□□ -0.53
SNU13-208ENST00000488571 ILKQ13418 452 aa11.71□□□□□ -0.53
SNU13-208ENST00000488571 EIF4EBP2Q13542 120 aaPredicted RBP11.71□□□□□ -0.53
SNU13-208ENST00000488571 SLC45A4Q5BKX6 768 aa11.71□□□□□ -0.53
SNU13-208ENST00000488571 ZC3H12AQ5D1E8 599 aaKnown RBP11.71□□□□□ -0.53
SNU13-208ENST00000488571 ZNF658Q5TYW1 1059 aaPredicted RBP11.71□□□□□ -0.53
SNU13-208ENST00000488571 RNF219Q5W0B1 726 aaPredicted RBP11.71□□□□□ -0.53
SNU13-208ENST00000488571 TBC1D3GQ6DHY5 549 aa11.71□□□□□ -0.53
SNU13-208ENST00000488571 TBC1D3CQ6IPX1 549 aa11.71□□□□□ -0.53
SNU13-208ENST00000488571 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.71□□□□□ -0.53
SNU13-208ENST00000488571 BEND5Q7L4P6 421 aa11.71□□□□□ -0.53
SNU13-208ENST00000488571 ARHGEF19Q8IW93 802 aa11.71□□□□□ -0.53
SNU13-208ENST00000488571 CCDC117Q8IWD4 279 aaPredicted RBP11.71□□□□□ -0.53
SNU13-208ENST00000488571 TBC1D3Q8IZP1 549 aaPredicted RBP11.71□□□□□ -0.53
SNU13-208ENST00000488571 PPM1KQ8N3J5 372 aa11.71□□□□□ -0.53
SNU13-208ENST00000488571 OXR1Q8N573 874 aa11.71□□□□□ -0.53
SNU13-208ENST00000488571 MFSD2AQ8NA29 543 aa11.71□□□□□ -0.53
SNU13-208ENST00000488571 RFFLQ8WZ73 363 aa11.71□□□□□ -0.53
SNU13-208ENST00000488571 FAM149B1Q96BN6 582 aa11.71□□□□□ -0.53
SNU13-208ENST00000488571 FCRL3Q96P31 734 aaPredicted RBP11.71□□□□□ -0.53
SNU13-208ENST00000488571 TSG101Q99816 390 aa11.71□□□□□ -0.53
SNU13-208ENST00000488571 PRMT1Q99873 361 aaKnown RBP11.71□□□□□ -0.53
SNU13-208ENST00000488571 TPX2Q9ULW0 747 aaKnown RBP11.71□□□□□ -0.53
SNU13-208ENST00000488571 CEP83Q9Y592 693 aa11.71□□□□□ -0.53
SNU13-208ENST00000488571 CFAP46Q8IYW2 2715 aa11.7□□□□□ -0.54
SNU13-208ENST00000488571 PLRG1O43660 514 aaKnown RBP11.7□□□□□ -0.54
SNU13-208ENST00000488571 BRINP1O60477 761 aa11.7□□□□□ -0.54
SNU13-208ENST00000488571 SDC3O75056 442 aa11.7□□□□□ -0.54
SNU13-208ENST00000488571 PDGFRAP16234 1089 aa11.7□□□□□ -0.54
SNU13-208ENST00000488571 ACP1P24666 158 aa11.7□□□□□ -0.54
SNU13-208ENST00000488571 MAT2AP31153 395 aaKnown RBP11.7□□□□□ -0.54
SNU13-208ENST00000488571 INSM1Q01101 510 aaPredicted RBP11.7□□□□□ -0.54
SNU13-208ENST00000488571 LRRC63Q05C16 580 aa11.7□□□□□ -0.54
SNU13-208ENST00000488571 AGBL4Q5VU57 503 aa11.7□□□□□ -0.54
SNU13-208ENST00000488571 CXorf57Q6NSI4 855 aaKnown RBP11.7□□□□□ -0.54
SNU13-208ENST00000488571 PCSK4Q6UW60 755 aa11.7□□□□□ -0.54
SNU13-208ENST00000488571 LRRC69Q6ZNQ3 347 aa11.7□□□□□ -0.54
SNU13-208ENST00000488571 RRAGAQ7L523 313 aa11.7□□□□□ -0.54
SNU13-208ENST00000488571 IQCHQ86VS3 1027 aa11.7□□□□□ -0.54
SNU13-208ENST00000488571 CHSY1Q86X52 802 aa11.7□□□□□ -0.54
SNU13-208ENST00000488571 CIR1Q86X95 450 aaPredicted RBP11.7□□□□□ -0.54
SNU13-208ENST00000488571 CCAR2Q8N163 923 aaKnown RBP11.7□□□□□ -0.54
SNU13-208ENST00000488571 CACTIN-AS1Q8N1I8 211 aa11.7□□□□□ -0.54
SNU13-208ENST00000488571 DCBLD1Q8N8Z6 715 aa11.7□□□□□ -0.54
SNU13-208ENST00000488571 SPATA20Q8TB22 786 aa11.7□□□□□ -0.54
SNU13-208ENST00000488571 ERCC4Q92889 916 aaPredicted RBP11.7□□□□□ -0.54
SNU13-208ENST00000488571 ALG14Q96F25 216 aa11.7□□□□□ -0.54
SNU13-208ENST00000488571 BTN2A3PQ96KV6 586 aa11.7□□□□□ -0.54
SNU13-208ENST00000488571 SPAG5Q96R06 1193 aa11.7□□□□□ -0.54
SNU13-208ENST00000488571 SCAND2PQ9GZW5 306 aaPredicted RBP11.7□□□□□ -0.54
SNU13-208ENST00000488571 KDM4CQ9H3R0 1056 aa11.7□□□□□ -0.54
SNU13-208ENST00000488571 GDPD2Q9HCC8 539 aa11.7□□□□□ -0.54
SNU13-208ENST00000488571 ASH1LQ9NR48 2969 aaKnown RBP11.7□□□□□ -0.54
SNU13-208ENST00000488571 ST7Q9NRC1 585 aa11.7□□□□□ -0.54
SNU13-208ENST00000488571 RMND1Q9NWS8 449 aa11.7□□□□□ -0.54
SNU13-208ENST00000488571 CA5BQ9Y2D0 317 aa11.7□□□□□ -0.54
SNU13-208ENST00000488571 KCNU1A8MYU2 1149 aa11.69□□□□□ -0.54
SNU13-208ENST00000488571 TRIM38O00635 465 aa11.69□□□□□ -0.54
SNU13-208ENST00000488571 RRP8O43159 456 aaKnown RBP11.69□□□□□ -0.54
SNU13-208ENST00000488571 SLC7A4O43246 635 aa11.69□□□□□ -0.54
SNU13-208ENST00000488571 SART1O43290 800 aaKnown RBP11.69□□□□□ -0.54
SNU13-208ENST00000488571 SIGLEC6O43699 453 aa11.69□□□□□ -0.54
SNU13-208ENST00000488571 TRUB2O95900 331 aaKnown RBP11.69□□□□□ -0.54
SNU13-208ENST00000488571 APOEP02649 317 aa11.69□□□□□ -0.54
SNU13-208ENST00000488571 GLDCP23378 1020 aa11.69□□□□□ -0.54
SNU13-208ENST00000488571 IRAK1P51617 712 aa11.69□□□□□ -0.54
SNU13-208ENST00000488571 PLK1P53350 603 aa11.69□□□□□ -0.54
SNU13-208ENST00000488571 TAS2R38P59533 333 aa11.69□□□□□ -0.54
SNU13-208ENST00000488571 GCNT1Q02742 428 aa11.69□□□□□ -0.54
SNU13-208ENST00000488571 CNTN1Q12860 1018 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms