RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 PPARGC1AQ9UBK2 798 aaKnown RBP13.04□□□□□ -0.32
NELFE-209ENST00000488426 XPO7Q9UIA9 1087 aaKnown RBP13.04□□□□□ -0.32
NELFE-209ENST00000488426 ASB3Q9Y575 518 aa13.04□□□□□ -0.32
NELFE-209ENST00000488426 ZNF318Q5VUA4 2279 aa13.04□□□□□ -0.32
NELFE-209ENST00000488426 DOCK4Q8N1I0 1966 aa13.04□□□□□ -0.32
NELFE-209ENST00000488426 DOCK8Q8NF50 2099 aa13.04□□□□□ -0.32
NELFE-209ENST00000488426 IGLV3-10A0A075B6K4 115 aa13.04□□□□□ -0.32
NELFE-209ENST00000488426 RNF103O00237 685 aa13.04□□□□□ -0.32
NELFE-209ENST00000488426 TMEM63AO94886 807 aa13.04□□□□□ -0.32
NELFE-209ENST00000488426 PDGFBP01127 241 aaPredicted RBP13.04□□□□□ -0.32
NELFE-209ENST00000488426 FDFT1P37268 417 aa13.04□□□□□ -0.32
NELFE-209ENST00000488426 GARSP41250 739 aaKnown RBP13.04□□□□□ -0.32
NELFE-209ENST00000488426 MAGEA4P43358 317 aa13.04□□□□□ -0.32
NELFE-209ENST00000488426 NTHL1P78549 312 aa13.04□□□□□ -0.32
NELFE-209ENST00000488426 MS4A13Q5J8X5 152 aa13.04□□□□□ -0.32
NELFE-209ENST00000488426 LRRC31Q6UY01 552 aa13.04□□□□□ -0.32
NELFE-209ENST00000488426 TRIM67Q6ZTA4 783 aa13.04□□□□□ -0.32
NELFE-209ENST00000488426 ZNF683Q8IZ20 524 aa13.04□□□□□ -0.32
NELFE-209ENST00000488426 RTL3Q8N8U3 475 aaKnown RBP13.04□□□□□ -0.32
NELFE-209ENST00000488426 EXOC4Q96A65 974 aa13.04□□□□□ -0.32
NELFE-209ENST00000488426 PWWP2AQ96N64 755 aa13.04□□□□□ -0.32
NELFE-209ENST00000488426 NECTIN4Q96NY8 510 aa13.04□□□□□ -0.32
NELFE-209ENST00000488426 TMEM109Q9BVC6 243 aa13.04□□□□□ -0.32
NELFE-209ENST00000488426 NINJ2Q9NZG7 142 aa13.04□□□□□ -0.32
NELFE-209ENST00000488426 ANAPC1Q9H1A4 1944 aa13.03□□□□□ -0.32
NELFE-209ENST00000488426 E7ESA3 106 aa13.03□□□□□ -0.32
NELFE-209ENST00000488426 ALOX15BO15296 676 aa13.03□□□□□ -0.32
NELFE-209ENST00000488426 ABHD2P08910 425 aa13.03□□□□□ -0.32
NELFE-209ENST00000488426 MYZAPP0CAP1 466 aa13.03□□□□□ -0.32
NELFE-209ENST00000488426 RHOQP17081 205 aa13.03□□□□□ -0.32
NELFE-209ENST00000488426 TPSB2P20231 275 aa13.03□□□□□ -0.32
NELFE-209ENST00000488426 CBX1P83916 185 aa13.03□□□□□ -0.32
NELFE-209ENST00000488426 SEMA5AQ13591 1074 aa13.03□□□□□ -0.32
NELFE-209ENST00000488426 TPSAB1Q15661 275 aa13.03□□□□□ -0.32
NELFE-209ENST00000488426 ANKRD20A2Q5SQ80 823 aa13.03□□□□□ -0.32
NELFE-209ENST00000488426 ANKRD20A1Q5TYW2 823 aa13.03□□□□□ -0.32
NELFE-209ENST00000488426 ANKRD20A3Q5VUR7 823 aa13.03□□□□□ -0.32
NELFE-209ENST00000488426 CCDC149Q6ZUS6 474 aa13.03□□□□□ -0.32
NELFE-209ENST00000488426 DNAJB7Q7Z6W7 309 aaPredicted RBP13.03□□□□□ -0.32
NELFE-209ENST00000488426 LRRC49Q8IUZ0 686 aa13.03□□□□□ -0.32
NELFE-209ENST00000488426 PDIK1LQ8N165 341 aa13.03□□□□□ -0.32
NELFE-209ENST00000488426 CCDC33Q8N5R6 958 aa13.03□□□□□ -0.32
NELFE-209ENST00000488426 OR2W6PQ8NHA6 318 aa13.03□□□□□ -0.32
NELFE-209ENST00000488426 PLD4Q96BZ4 506 aa13.03□□□□□ -0.32
NELFE-209ENST00000488426 ASIC4Q96FT7 647 aa13.03□□□□□ -0.32
NELFE-209ENST00000488426 VAT1Q99536 393 aa13.03□□□□□ -0.32
NELFE-209ENST00000488426 NACA2Q9H009 215 aa13.03□□□□□ -0.32
NELFE-209ENST00000488426 SAYSD1Q9NPB0 183 aa13.03□□□□□ -0.32
NELFE-209ENST00000488426 DNAJC17Q9NVM6 304 aaKnown RBP13.03□□□□□ -0.32
NELFE-209ENST00000488426 OBSL1O75147 1896 aa13.03□□□□□ -0.32
NELFE-209ENST00000488426 VGLL3A8MV65 326 aa13.02□□□□□ -0.32
NELFE-209ENST00000488426 COCHO43405 550 aa13.02□□□□□ -0.32
NELFE-209ENST00000488426 CDK16Q00536 496 aa13.02□□□□□ -0.32
NELFE-209ENST00000488426 WASHC5Q12768 1159 aa13.02□□□□□ -0.32
NELFE-209ENST00000488426 AUHQ13825 339 aaKnown RBP13.02□□□□□ -0.32
NELFE-209ENST00000488426 POTEHQ6S545 545 aa13.02□□□□□ -0.32
NELFE-209ENST00000488426 C14orf80Q86SX3 495 aa13.02□□□□□ -0.32
NELFE-209ENST00000488426 MCUQ8NE86 351 aa13.02□□□□□ -0.32
NELFE-209ENST00000488426 LRRN4Q8WUT4 740 aa13.02□□□□□ -0.32
NELFE-209ENST00000488426 SMG7Q92540 1137 aaKnown RBP13.02□□□□□ -0.32
NELFE-209ENST00000488426 TSGA13Q96PP4 275 aa13.02□□□□□ -0.32
NELFE-209ENST00000488426 MYADMQ96S97 322 aa13.02□□□□□ -0.32
NELFE-209ENST00000488426 ZYG11BQ9C0D3 744 aa13.02□□□□□ -0.32
NELFE-209ENST00000488426 ETNK1Q9HBU6 452 aa13.02□□□□□ -0.32
NELFE-209ENST00000488426 TMBIM4Q9HC24 238 aa13.02□□□□□ -0.32
NELFE-209ENST00000488426 TRHDEQ9UKU6 1024 aa13.02□□□□□ -0.32
NELFE-209ENST00000488426 DENND4AQ7Z401 1863 aa13.02□□□□□ -0.32
NELFE-209ENST00000488426 NOTCH4Q99466 2003 aa13.02□□□□□ -0.33
NELFE-209ENST00000488426 TCRBV7S3A2A0A539 114 aa13.02□□□□□ -0.33
NELFE-209ENST00000488426 TMEM221A6NGB7 291 aa13.02□□□□□ -0.33
NELFE-209ENST00000488426 GOLGA8MH3BSY2 632 aa13.02□□□□□ -0.33
NELFE-209ENST00000488426 M0R296 226 aa13.02□□□□□ -0.33
NELFE-209ENST00000488426 ACSL3O95573 720 aa13.02□□□□□ -0.33
NELFE-209ENST00000488426 OAS1P00973 400 aaKnown RBP13.02□□□□□ -0.33
NELFE-209ENST00000488426 SHBGP04278 402 aa13.02□□□□□ -0.33
NELFE-209ENST00000488426 HMBSP08397 361 aa13.02□□□□□ -0.33
NELFE-209ENST00000488426 PDIA2Q13087 525 aaKnown RBP13.02□□□□□ -0.33
NELFE-209ENST00000488426 KYNUQ16719 465 aa13.02□□□□□ -0.33
NELFE-209ENST00000488426 PARP6Q2NL67 630 aa13.02□□□□□ -0.33
NELFE-209ENST00000488426 KRT71Q3SY84 523 aa13.02□□□□□ -0.33
NELFE-209ENST00000488426 PABPC1LQ4VXU2 614 aaKnown RBP13.02□□□□□ -0.33
NELFE-209ENST00000488426 AFMIDQ63HM1 303 aa13.02□□□□□ -0.33
NELFE-209ENST00000488426 NLRP14Q86W24 1093 aa13.02□□□□□ -0.33
NELFE-209ENST00000488426 ARHGAP12Q8IWW6 846 aa13.02□□□□□ -0.33
NELFE-209ENST00000488426 TP53INP2Q8IXH6 220 aa13.02□□□□□ -0.33
NELFE-209ENST00000488426 CCDC13Q8IYE1 715 aa13.02□□□□□ -0.33
NELFE-209ENST00000488426 TAB3Q8N5C8 712 aaPredicted RBP13.02□□□□□ -0.33
NELFE-209ENST00000488426 AZIN2Q96A70 460 aa13.02□□□□□ -0.33
NELFE-209ENST00000488426 ZBTB9Q96C00 473 aa13.02□□□□□ -0.33
NELFE-209ENST00000488426 PRMT1Q99873 361 aaKnown RBP13.02□□□□□ -0.33
NELFE-209ENST00000488426 ROPN1BQ9BZX4 212 aaPredicted RBP13.02□□□□□ -0.33
NELFE-209ENST00000488426 RETREG1Q9H6L5 497 aa13.02□□□□□ -0.33
NELFE-209ENST00000488426 ROPN1Q9HAT0 212 aaPredicted RBP13.02□□□□□ -0.33
NELFE-209ENST00000488426 EIF2B3Q9NR50 452 aaKnown RBP13.02□□□□□ -0.33
NELFE-209ENST00000488426 TMEM248Q9NWD8 314 aa13.02□□□□□ -0.33
NELFE-209ENST00000488426 IGSF9Q9P2J2 1179 aa13.02□□□□□ -0.33
NELFE-209ENST00000488426 VANGL2Q9ULK5 521 aa13.02□□□□□ -0.33
NELFE-209ENST00000488426 VPS13AQ96RL7 3174 aa13.01□□□□□ -0.33
NELFE-209ENST00000488426 GOLGA6CA6NDK9 693 aa13.01□□□□□ -0.33
NELFE-209ENST00000488426 DRGXA6NNA5 263 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms