RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 ALG14Q96F25 216 aa23.25■■□□□ 1.31
PTPN4-211ENST00000488279 ACE2Q9BYF1 805 aaPredicted RBP23.25■■□□□ 1.31
PTPN4-211ENST00000488279 ARHGEF38Q9NXL2 777 aa23.25■■□□□ 1.31
PTPN4-211ENST00000488279 VPS28Q9UK41 221 aa23.25■■□□□ 1.31
PTPN4-211ENST00000488279 APOBEC2Q9Y235 224 aaKnown RBP23.25■■□□□ 1.31
PTPN4-211ENST00000488279 FAM221BA6H8Z2 402 aa23.24■■□□□ 1.31
PTPN4-211ENST00000488279 FLRT2O43155 660 aa23.24■■□□□ 1.31
PTPN4-211ENST00000488279 ADCY5O95622 1261 aa23.24■■□□□ 1.31
PTPN4-211ENST00000488279 VAV1P15498 845 aa23.24■■□□□ 1.31
PTPN4-211ENST00000488279 SULT1E1P49888 294 aa23.24■■□□□ 1.31
PTPN4-211ENST00000488279 IRAK1P51617 712 aa23.24■■□□□ 1.31
PTPN4-211ENST00000488279 C21orf59P57076 290 aa23.24■■□□□ 1.31
PTPN4-211ENST00000488279 FAM102AQ5T9C2 384 aaPredicted RBP23.24■■□□□ 1.31
PTPN4-211ENST00000488279 LAYNQ6UX15 382 aa23.24■■□□□ 1.31
PTPN4-211ENST00000488279 CLEC17AQ6ZS10 378 aa23.24■■□□□ 1.31
PTPN4-211ENST00000488279 DSG4Q86SJ6 1040 aa23.24■■□□□ 1.31
PTPN4-211ENST00000488279 MSANTD4Q8NCY6 345 aa23.24■■□□□ 1.31
PTPN4-211ENST00000488279 FRS2Q8WU20 508 aa23.24■■□□□ 1.31
PTPN4-211ENST00000488279 PGAP3Q96FM1 320 aaPredicted RBP23.24■■□□□ 1.31
PTPN4-211ENST00000488279 CDC6Q99741 560 aa23.24■■□□□ 1.31
PTPN4-211ENST00000488279 ZMIZ1Q9ULJ6 1067 aa23.24■■□□□ 1.31
PTPN4-211ENST00000488279 TBC1D30Q9Y2I9 924 aa23.24■■□□□ 1.31
PTPN4-211ENST00000488279 KCNK3O14649 394 aa23.23■■□□□ 1.31
PTPN4-211ENST00000488279 VILLO15195 856 aa23.23■■□□□ 1.31
PTPN4-211ENST00000488279 ATP9BO43861 1147 aa23.23■■□□□ 1.31
PTPN4-211ENST00000488279 LSM8O95777 96 aaKnown RBP23.23■■□□□ 1.31
PTPN4-211ENST00000488279 GGCXP38435 758 aa23.23■■□□□ 1.31
PTPN4-211ENST00000488279 CCR5P51681 352 aa23.23■■□□□ 1.31
PTPN4-211ENST00000488279 DEUP1Q05D60 604 aa23.23■■□□□ 1.31
PTPN4-211ENST00000488279 SLC25A52Q3SY17 297 aa23.23■■□□□ 1.31
PTPN4-211ENST00000488279 KCNT1Q5JUK3 1230 aa23.23■■□□□ 1.31
PTPN4-211ENST00000488279 ACBD5Q5T8D3 534 aaPredicted RBP23.23■■□□□ 1.31
PTPN4-211ENST00000488279 OTUD1Q5VV17 481 aaPredicted RBP23.23■■□□□ 1.31
PTPN4-211ENST00000488279 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.23■■□□□ 1.31
PTPN4-211ENST00000488279 XYLT1Q86Y38 959 aa23.23■■□□□ 1.31
PTPN4-211ENST00000488279 PNPLA1Q8N8W4 532 aa23.23■■□□□ 1.31
PTPN4-211ENST00000488279 OR52K2Q8NGK3 314 aa23.23■■□□□ 1.31
PTPN4-211ENST00000488279 ENOX1Q8TC92 643 aaKnown RBP23.23■■□□□ 1.31
PTPN4-211ENST00000488279 ADAMTS14Q8WXS8 1223 aa23.23■■□□□ 1.31
PTPN4-211ENST00000488279 OR8D1Q8WZ84 308 aa23.23■■□□□ 1.31
PTPN4-211ENST00000488279 MUC3BQ9H195 1237 aa23.23■■□□□ 1.31
PTPN4-211ENST00000488279 LMBRD1Q9NUN5 540 aa23.23■■□□□ 1.31
PTPN4-211ENST00000488279 TAB2Q9NYJ8 693 aa23.23■■□□□ 1.31
PTPN4-211ENST00000488279 TPX2Q9ULW0 747 aaKnown RBP23.23■■□□□ 1.31
PTPN4-211ENST00000488279 OR51B4Q9Y5P0 310 aa23.23■■□□□ 1.31
PTPN4-211ENST00000488279 F8VZ95 297 aa23.22■■□□□ 1.31
PTPN4-211ENST00000488279 DFNA5O60443 496 aa23.22■■□□□ 1.31
PTPN4-211ENST00000488279 TFE3P19532 575 aaPredicted RBP23.22■■□□□ 1.31
PTPN4-211ENST00000488279 CTSKP43235 329 aa23.22■■□□□ 1.31
PTPN4-211ENST00000488279 ADPRHP54922 357 aa23.22■■□□□ 1.31
PTPN4-211ENST00000488279 DLG2Q15700 870 aa23.22■■□□□ 1.31
PTPN4-211ENST00000488279 FAM46CQ5VWP2 391 aa23.22■■□□□ 1.31
PTPN4-211ENST00000488279 LRRC31Q6UY01 552 aa23.22■■□□□ 1.31
PTPN4-211ENST00000488279 NOP9Q86U38 636 aaKnown RBP23.22■■□□□ 1.31
PTPN4-211ENST00000488279 C1orf74Q96LT6 269 aa23.22■■□□□ 1.31
PTPN4-211ENST00000488279 SLC6A18Q96N87 628 aa23.22■■□□□ 1.31
PTPN4-211ENST00000488279 TBCBQ99426 244 aa23.22■■□□□ 1.31
PTPN4-211ENST00000488279 EBF2Q9HAK2 575 aa23.22■■□□□ 1.31
PTPN4-211ENST00000488279 ANLNQ9NQW6 1124 aa23.22■■□□□ 1.31
PTPN4-211ENST00000488279 DMXL2Q8TDJ6 3036 aa23.21■■□□□ 1.31
PTPN4-211ENST00000488279 TBC1D3DA0A087WVF3 549 aa23.21■■□□□ 1.31
PTPN4-211ENST00000488279 TBC1D3IA0A087WXS9 549 aa23.21■■□□□ 1.31
PTPN4-211ENST00000488279 TBC1D3EA0A087X179 549 aa23.21■■□□□ 1.31
PTPN4-211ENST00000488279 TBC1D3KA0A087X1G2 549 aa23.21■■□□□ 1.31
PTPN4-211ENST00000488279 TBC1D3FA6NER0 549 aaPredicted RBP23.21■■□□□ 1.31
PTPN4-211ENST00000488279 TBC1D3LB9A6J9 549 aa23.21■■□□□ 1.31
PTPN4-211ENST00000488279 H0Y8X5 98 aa23.21■■□□□ 1.31
PTPN4-211ENST00000488279 CNTN5O94779 1100 aa23.21■■□□□ 1.31
PTPN4-211ENST00000488279 TPM2P07951 284 aa23.21■■□□□ 1.31
PTPN4-211ENST00000488279 TBC1D3HP0C7X1 549 aa23.21■■□□□ 1.31
PTPN4-211ENST00000488279 ZNF18P17022 549 aa23.21■■□□□ 1.31
PTPN4-211ENST00000488279 ANP32AP39687 249 aaKnown RBP23.21■■□□□ 1.31
PTPN4-211ENST00000488279 CCT8P50990 548 aa23.21■■□□□ 1.31
PTPN4-211ENST00000488279 KRT83P78385 493 aa23.21■■□□□ 1.31
PTPN4-211ENST00000488279 TBC1D3GQ6DHY5 549 aa23.21■■□□□ 1.31
PTPN4-211ENST00000488279 TBC1D3CQ6IPX1 549 aa23.21■■□□□ 1.31
PTPN4-211ENST00000488279 SLCO6A1Q86UG4 719 aa23.21■■□□□ 1.31
PTPN4-211ENST00000488279 TBC1D3Q8IZP1 549 aaPredicted RBP23.21■■□□□ 1.31
PTPN4-211ENST00000488279 BAHD1Q8TBE0 780 aaPredicted RBP23.21■■□□□ 1.31
PTPN4-211ENST00000488279 CPA5Q8WXQ8 436 aa23.21■■□□□ 1.31
PTPN4-211ENST00000488279 VPS16Q9H269 839 aa23.21■■□□□ 1.31
PTPN4-211ENST00000488279 AASDHPPTQ9NRN7 309 aa23.21■■□□□ 1.31
PTPN4-211ENST00000488279 FREM2Q5SZK8 3169 aa23.21■■□□□ 1.31
PTPN4-211ENST00000488279 KNL1Q8NG31 2342 aa23.2■■□□□ 1.3
PTPN4-211ENST00000488279 FAM170AA1A519 330 aa23.2■■□□□ 1.3
PTPN4-211ENST00000488279 GOLGA8SH3BPF8 625 aa23.2■■□□□ 1.3
PTPN4-211ENST00000488279 MCF2LO15068 1137 aa23.2■■□□□ 1.3
PTPN4-211ENST00000488279 PCDHGA12O60330 932 aa23.2■■□□□ 1.3
PTPN4-211ENST00000488279 RHOCP08134 193 aa23.2■■□□□ 1.3
PTPN4-211ENST00000488279 MMEP08473 750 aa23.2■■□□□ 1.3
PTPN4-211ENST00000488279 DRD3P35462 400 aa23.2■■□□□ 1.3
PTPN4-211ENST00000488279 ALFQ53S48 1182 aa23.2■■□□□ 1.3
PTPN4-211ENST00000488279 C2CD6Q53TS8 623 aa23.2■■□□□ 1.3
PTPN4-211ENST00000488279 SETD3Q86TU7 594 aaPredicted RBP23.2■■□□□ 1.3
PTPN4-211ENST00000488279 ZNF677Q86XU0 584 aa23.2■■□□□ 1.3
PTPN4-211ENST00000488279 SH2D3CQ8N5H7 860 aa23.2■■□□□ 1.3
PTPN4-211ENST00000488279 C2orf49Q9BVC5 232 aaPredicted RBP23.2■■□□□ 1.3
PTPN4-211ENST00000488279 KDM4CQ9H3R0 1056 aa23.2■■□□□ 1.3
PTPN4-211ENST00000488279 SARDHQ9UL12 918 aa23.2■■□□□ 1.3
PTPN4-211ENST00000488279 PPM1HQ9ULR3 514 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms