RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 ARSEP51690 589 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 MRPS21P82921 87 aaKnown RBP11.33□□□□□ -0.6
UBE4B-210ENST00000488228 GNA12Q03113 381 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 DPYSL3Q14195 570 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 DMC1Q14565 340 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 ZNF234Q14588 700 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 TSSK4Q6SA08 328 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 SERPINA13PQ6UXR4 307 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 POLNQ7Z5Q5 900 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 SETD3Q86TU7 594 aaPredicted RBP11.33□□□□□ -0.6
UBE4B-210ENST00000488228 DCAF4L2Q8NA75 395 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 UCMAQ8WVF2 138 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 RAPGEF5Q92565 580 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 KRT35Q92764 455 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 TTC17Q96AE7 1141 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 CELF6Q96J87 481 aaKnown RBP11.33□□□□□ -0.6
UBE4B-210ENST00000488228 MRGPRX3Q96LB0 322 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 IER2Q9BTL4 223 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 MTG2Q9H4K7 406 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 CATSPERBQ9H7T0 1116 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 ATP13A1Q9HD20 1204 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 LZTFL1Q9NQ48 299 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 PRMT8Q9NR22 394 aaPredicted RBP11.33□□□□□ -0.6
UBE4B-210ENST00000488228 ETNK2Q9NVF9 386 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 THAP10Q9P2Z0 257 aaPredicted RBP11.33□□□□□ -0.6
UBE4B-210ENST00000488228 VPS51Q9UID3 782 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 GUCA1BQ9UMX6 200 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 PPP2R2CQ9Y2T4 447 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 ALG6Q9Y672 507 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 STON1Q9Y6Q2 735 aa11.33□□□□□ -0.6
UBE4B-210ENST00000488228 ILVBLA1L0T0 632 aa11.32□□□□□ -0.6
UBE4B-210ENST00000488228 CBX4O00257 560 aa11.32□□□□□ -0.6
UBE4B-210ENST00000488228 LAMTOR5O43504 91 aa11.32□□□□□ -0.6
UBE4B-210ENST00000488228 PALMO75781 387 aa11.32□□□□□ -0.6
UBE4B-210ENST00000488228 FTCDO95954 541 aa11.32□□□□□ -0.6
UBE4B-210ENST00000488228 HOXB2P14652 356 aa11.32□□□□□ -0.6
UBE4B-210ENST00000488228 ERCC2P18074 760 aa11.32□□□□□ -0.6
UBE4B-210ENST00000488228 NTSR1P30989 418 aa11.32□□□□□ -0.6
UBE4B-210ENST00000488228 CCR3P51677 355 aa11.32□□□□□ -0.6
UBE4B-210ENST00000488228 PLK1P53350 603 aa11.32□□□□□ -0.6
UBE4B-210ENST00000488228 OXCT1P55809 520 aa11.32□□□□□ -0.6
UBE4B-210ENST00000488228 SLC12A1Q13621 1099 aa11.32□□□□□ -0.6
UBE4B-210ENST00000488228 KIAA1211LQ6NV74 962 aa11.32□□□□□ -0.6
UBE4B-210ENST00000488228 TMEM92Q6UXU6 159 aa11.32□□□□□ -0.6
UBE4B-210ENST00000488228 LINGO4Q6UY18 593 aa11.32□□□□□ -0.6
UBE4B-210ENST00000488228 SYT13Q7L8C5 426 aa11.32□□□□□ -0.6
UBE4B-210ENST00000488228 TRMT11Q7Z4G4 463 aaKnown RBP11.32□□□□□ -0.6
UBE4B-210ENST00000488228 CACUL1Q86Y37 369 aa11.32□□□□□ -0.6
UBE4B-210ENST00000488228 C1orf210Q8IVY1 113 aa11.32□□□□□ -0.6
UBE4B-210ENST00000488228 TP53INP2Q8IXH6 220 aa11.32□□□□□ -0.6
UBE4B-210ENST00000488228 RHOT1Q8IXI2 618 aa11.32□□□□□ -0.6
UBE4B-210ENST00000488228 MAML2Q8IZL2 1156 aaPredicted RBP11.32□□□□□ -0.6
UBE4B-210ENST00000488228 KCTD6Q8NC69 237 aa11.32□□□□□ -0.6
UBE4B-210ENST00000488228 CCDC26Q8TAB7 109 aa11.32□□□□□ -0.6
UBE4B-210ENST00000488228 FAM71BQ8TC56 605 aa11.32□□□□□ -0.6
UBE4B-210ENST00000488228 HMCESQ96FZ2 354 aa11.32□□□□□ -0.6
UBE4B-210ENST00000488228 MYO19Q96H55 970 aa11.32□□□□□ -0.6
UBE4B-210ENST00000488228 RPL10LQ96L21 214 aaKnown RBP11.32□□□□□ -0.6
UBE4B-210ENST00000488228 ZNF670Q9BS34 389 aa11.32□□□□□ -0.6
UBE4B-210ENST00000488228 SPON2Q9BUD6 331 aa11.32□□□□□ -0.6
UBE4B-210ENST00000488228 TSGA10Q9BZW7 698 aa11.32□□□□□ -0.6
UBE4B-210ENST00000488228 KLC2Q9H0B6 622 aa11.32□□□□□ -0.6
UBE4B-210ENST00000488228 ERVW-1Q9UQF0 538 aa11.32□□□□□ -0.6
UBE4B-210ENST00000488228 A0A1W2PQF6 199 aa11.31□□□□□ -0.6
UBE4B-210ENST00000488228 TCRBV21S2A2A0A5A6 115 aa11.31□□□□□ -0.6
UBE4B-210ENST00000488228 C3orf70A6NLC5 250 aaPredicted RBP11.31□□□□□ -0.6
UBE4B-210ENST00000488228 WASH4PA8MWX3 477 aa11.31□□□□□ -0.6
UBE4B-210ENST00000488228 RASA4BC9J798 803 aa11.31□□□□□ -0.6
UBE4B-210ENST00000488228 K7ESF4 209 aa11.31□□□□□ -0.6
UBE4B-210ENST00000488228 DCLK1O15075 740 aa11.31□□□□□ -0.6
UBE4B-210ENST00000488228 RASA4O43374 803 aa11.31□□□□□ -0.6
UBE4B-210ENST00000488228 GALR2O43603 387 aaPredicted RBP11.31□□□□□ -0.6
UBE4B-210ENST00000488228 KRT86O43790 486 aa11.31□□□□□ -0.6
UBE4B-210ENST00000488228 MFSD11O43934 449 aa11.31□□□□□ -0.6
UBE4B-210ENST00000488228 ATG13O75143 517 aa11.31□□□□□ -0.6
UBE4B-210ENST00000488228 ASLP04424 464 aa11.31□□□□□ -0.6
UBE4B-210ENST00000488228 ATP5BP06576 529 aaKnown RBP11.31□□□□□ -0.6
UBE4B-210ENST00000488228 VAV1P15498 845 aa11.31□□□□□ -0.6
UBE4B-210ENST00000488228 IL4RP24394 825 aa11.31□□□□□ -0.6
UBE4B-210ENST00000488228 CXCL12P48061 93 aa11.31□□□□□ -0.6
UBE4B-210ENST00000488228 HCAR3P49019 387 aa11.31□□□□□ -0.6
UBE4B-210ENST00000488228 PXNP49023 591 aaPredicted RBP11.31□□□□□ -0.6
UBE4B-210ENST00000488228 DNA2P51530 1060 aa11.31□□□□□ -0.6
UBE4B-210ENST00000488228 ZNF135P52742 658 aaPredicted RBP11.31□□□□□ -0.6
UBE4B-210ENST00000488228 ARF5P84085 180 aa11.31□□□□□ -0.6
UBE4B-210ENST00000488228 ECT2LQ008S8 904 aa11.31□□□□□ -0.6
UBE4B-210ENST00000488228 DMWDQ09019 674 aa11.31□□□□□ -0.6
UBE4B-210ENST00000488228 NUMA1Q14980 2115 aa11.31□□□□□ -0.6
UBE4B-210ENST00000488228 LLGL1Q15334 1064 aa11.31□□□□□ -0.6
UBE4B-210ENST00000488228 ANGPT1Q15389 498 aa11.31□□□□□ -0.6
UBE4B-210ENST00000488228 IFI16Q16666 785 aaKnown RBP11.31□□□□□ -0.6
UBE4B-210ENST00000488228 HSF5Q4G112 596 aaPredicted RBP11.31□□□□□ -0.6
UBE4B-210ENST00000488228 EOGTQ5NDL2 527 aa11.31□□□□□ -0.6
UBE4B-210ENST00000488228 LRRC38Q5VT99 294 aa11.31□□□□□ -0.6
UBE4B-210ENST00000488228 HEATR6Q6AI08 1181 aaKnown RBP11.31□□□□□ -0.6
UBE4B-210ENST00000488228 IL31Q6EBC2 164 aa11.31□□□□□ -0.6
UBE4B-210ENST00000488228 TMCO3Q6UWJ1 677 aa11.31□□□□□ -0.6
UBE4B-210ENST00000488228 ZNF783Q6ZMS7 281 aa11.31□□□□□ -0.6
UBE4B-210ENST00000488228 LEKR1Q6ZMV7 388 aa11.31□□□□□ -0.6
UBE4B-210ENST00000488228 ZNF354CQ86Y25 554 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms