RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 CA3P07451 260 aa14.04□□□□□ -0.16
COPS7B-221ENST00000488111 ETS2P15036 469 aa14.04□□□□□ -0.16
COPS7B-221ENST00000488111 VAV1P15498 845 aa14.04□□□□□ -0.16
COPS7B-221ENST00000488111 SLC1A1P43005 524 aa14.04□□□□□ -0.16
COPS7B-221ENST00000488111 INHBCP55103 352 aa14.04□□□□□ -0.16
COPS7B-221ENST00000488111 DAOAP59103 153 aa14.04□□□□□ -0.16
COPS7B-221ENST00000488111 PIGHQ14442 188 aaPredicted RBP14.04□□□□□ -0.16
COPS7B-221ENST00000488111 CCDC14Q49A88 953 aa14.04□□□□□ -0.16
COPS7B-221ENST00000488111 ATP13A4Q4VNC1 1196 aa14.04□□□□□ -0.16
COPS7B-221ENST00000488111 SLC26A9Q7LBE3 791 aa14.04□□□□□ -0.16
COPS7B-221ENST00000488111 HIC2Q96JB3 615 aa14.04□□□□□ -0.16
COPS7B-221ENST00000488111 VPS11Q9H270 941 aa14.04□□□□□ -0.16
COPS7B-221ENST00000488111 FBXO6Q9NRD1 293 aaPredicted RBP14.04□□□□□ -0.16
COPS7B-221ENST00000488111 ZDHHC7Q9NXF8 308 aa14.04□□□□□ -0.16
COPS7B-221ENST00000488111 CIDEBQ9UHD4 219 aa14.04□□□□□ -0.16
COPS7B-221ENST00000488111 TNFRSF10BO14763 440 aa14.04□□□□□ -0.16
COPS7B-221ENST00000488111 ZNF143P52747 638 aaPredicted RBP14.04□□□□□ -0.16
COPS7B-221ENST00000488111 USP46P62068 366 aa14.04□□□□□ -0.16
COPS7B-221ENST00000488111 GRM2Q14416 872 aa14.04□□□□□ -0.16
COPS7B-221ENST00000488111 TRMT5Q32P41 509 aaKnown RBP14.04□□□□□ -0.16
COPS7B-221ENST00000488111 EFHC1Q5JVL4 640 aa14.04□□□□□ -0.16
COPS7B-221ENST00000488111 TXNRD3NBQ6F5E7 133 aa14.04□□□□□ -0.16
COPS7B-221ENST00000488111 TMC7Q7Z402 723 aa14.04□□□□□ -0.16
COPS7B-221ENST00000488111 DEFB106AQ8N104 65 aa14.04□□□□□ -0.16
COPS7B-221ENST00000488111 SPPL2BQ8TCT7 592 aa14.04□□□□□ -0.16
COPS7B-221ENST00000488111 FAM161BQ96MY7 647 aa14.04□□□□□ -0.16
COPS7B-221ENST00000488111 TMEM120AQ9BXJ8 343 aa14.04□□□□□ -0.16
COPS7B-221ENST00000488111 ADAM33Q9BZ11 813 aa14.04□□□□□ -0.16
COPS7B-221ENST00000488111 EPB41L1Q9H4G0 881 aa14.04□□□□□ -0.16
COPS7B-221ENST00000488111 GPAMQ9HCL2 828 aa14.04□□□□□ -0.16
COPS7B-221ENST00000488111 KLHL11Q9NVR0 708 aa14.04□□□□□ -0.16
COPS7B-221ENST00000488111 NDE1Q9NXR1 346 aa14.04□□□□□ -0.16
COPS7B-221ENST00000488111 HSFX1Q9UBD0 423 aa14.04□□□□□ -0.16
COPS7B-221ENST00000488111 PCSK1NQ9UHG2 260 aa14.04□□□□□ -0.16
COPS7B-221ENST00000488111 SMIM31A0A1B0GVY4 71 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 BUD23O43709 281 aaKnown RBP14.03□□□□□ -0.16
COPS7B-221ENST00000488111 SEC24AO95486 1093 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 PBX2P40425 430 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 PGFP49763 221 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 ERVFC1P60507 584 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 YWHAZP63104 245 aaKnown RBP14.03□□□□□ -0.16
COPS7B-221ENST00000488111 P3H1Q32P28 736 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 DCAF6Q58WW2 860 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 EFHC2Q5JST6 749 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 ACBD5Q5T8D3 534 aaPredicted RBP14.03□□□□□ -0.16
COPS7B-221ENST00000488111 SPATA24Q86W54 205 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 CCDC110Q8TBZ0 833 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 FNIP1Q8TF40 1166 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 GIPC2Q8TF65 315 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 EDEM1Q92611 657 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 ACSF2Q96CM8 615 aaPredicted RBP14.03□□□□□ -0.16
COPS7B-221ENST00000488111 OXCT2Q9BYC2 517 aaPredicted RBP14.03□□□□□ -0.16
COPS7B-221ENST00000488111 ZBP1Q9H171 429 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 MANSC1Q9H8J5 431 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 CNGB3Q9NQW8 809 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 ETNK2Q9NVF9 386 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 ZNF510Q9Y2H8 683 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 PCDHGA4Q9Y5G9 962 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 NLRC5Q86WI3 1866 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 CEP290O15078 2479 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 DNALI1O14645 258 aaPredicted RBP14.03□□□□□ -0.16
COPS7B-221ENST00000488111 TM9SF1O15321 606 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 TEX28O15482 410 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 LRCH4O75427 683 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 CXCL14O95715 111 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 ITGA2BP08514 1039 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 HAPLN1P10915 354 aaPredicted RBP14.03□□□□□ -0.16
COPS7B-221ENST00000488111 KRT4P19013 534 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 DNAJB1P25685 340 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 SDC4P31431 198 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 CCNFP41002 786 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 GRIA2P42262 883 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 ATXN1P54253 815 aaKnown RBP14.03□□□□□ -0.16
COPS7B-221ENST00000488111 ACTR3P61158 418 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 AP2B1P63010 937 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 PITX1P78337 314 aaPredicted RBP14.03□□□□□ -0.16
COPS7B-221ENST00000488111 ZBTB16Q05516 673 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 MAP7Q14244 749 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 SH2D4BQ5SQS7 431 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 SYPL2Q5VXT5 272 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 BHLHA9Q7RTU4 235 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 ADGRG6Q86SQ4 1221 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 TMPRSS6Q8IU80 811 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 ZNF461Q8TAF7 563 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 C8orf48Q96LL4 319 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 TSSK1BQ9BXA7 367 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 CERS4Q9HA82 394 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 NGRNQ9NPE2 291 aaKnown RBP14.03□□□□□ -0.16
COPS7B-221ENST00000488111 PLA2G4CQ9UP65 541 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 USP3Q9Y6I4 520 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 KIAA1671Q9BY89 1806 aa14.03□□□□□ -0.16
COPS7B-221ENST00000488111 CHD7Q9P2D1 2997 aa14.02□□□□□ -0.16
COPS7B-221ENST00000488111 SYNJ2BP-COX16A0A087WUM0 186 aa14.02□□□□□ -0.16
COPS7B-221ENST00000488111 WDR91A4D1P6 747 aa14.02□□□□□ -0.16
COPS7B-221ENST00000488111 CARNS1A5YM72 827 aa14.02□□□□□ -0.16
COPS7B-221ENST00000488111 FCHO1O14526 889 aa14.02□□□□□ -0.16
COPS7B-221ENST00000488111 FBXO21O94952 628 aa14.02□□□□□ -0.16
COPS7B-221ENST00000488111 IL1BP01584 269 aa14.02□□□□□ -0.16
COPS7B-221ENST00000488111 FYNP06241 537 aa14.02□□□□□ -0.16
COPS7B-221ENST00000488111 DLDP09622 509 aaKnown RBP14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms