RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 FAM72BQ86X60 149 aa24.31■■□□□ 1.48
RHBDD3-205ENST00000488106 DRC7Q8IY82 874 aa24.31■■□□□ 1.48
RHBDD3-205ENST00000488106 KDM1BQ8NB78 822 aa24.31■■□□□ 1.48
RHBDD3-205ENST00000488106 TRIM7Q9C029 511 aa24.31■■□□□ 1.48
RHBDD3-205ENST00000488106 ISCUQ9H1K1 167 aa24.31■■□□□ 1.48
RHBDD3-205ENST00000488106 FBRSQ9HAH7 460 aa24.31■■□□□ 1.48
RHBDD3-205ENST00000488106 ARHGAP20Q9P2F6 1191 aa24.31■■□□□ 1.48
RHBDD3-205ENST00000488106 OR51B4Q9Y5P0 310 aa24.31■■□□□ 1.48
RHBDD3-205ENST00000488106 SCINQ9Y6U3 715 aa24.31■■□□□ 1.48
RHBDD3-205ENST00000488106 ATXN2Q99700 1313 aaKnown RBP24.31■■□□□ 1.48
RHBDD3-205ENST00000488106 ANKRD36A6QL64 1941 aa24.3■■□□□ 1.48
RHBDD3-205ENST00000488106 A0A0D9SEW6 157 aa24.3■■□□□ 1.48
RHBDD3-205ENST00000488106 EDDM13A0A1B0GTR0 161 aa24.3■■□□□ 1.48
RHBDD3-205ENST00000488106 BCLAF3A2AJT9 711 aaKnown RBP24.3■■□□□ 1.48
RHBDD3-205ENST00000488106 MYBL1P10243 752 aa24.3■■□□□ 1.48
RHBDD3-205ENST00000488106 RPS14P62263 151 aaKnown RBP24.3■■□□□ 1.48
RHBDD3-205ENST00000488106 NRG1Q02297 640 aaPredicted RBP24.3■■□□□ 1.48
RHBDD3-205ENST00000488106 ZNF252P-AS1Q0IIN9 211 aa24.3■■□□□ 1.48
RHBDD3-205ENST00000488106 SCAPQ12770 1279 aa24.3■■□□□ 1.48
RHBDD3-205ENST00000488106 SF3A2Q15428 464 aaKnown RBP24.3■■□□□ 1.48
RHBDD3-205ENST00000488106 MANEALQ5VSG8 457 aa24.3■■□□□ 1.48
RHBDD3-205ENST00000488106 PRR23CQ6ZRP0 262 aa24.3■■□□□ 1.48
RHBDD3-205ENST00000488106 SETD3Q86TU7 594 aaPredicted RBP24.3■■□□□ 1.48
RHBDD3-205ENST00000488106 PYROXD2Q8N2H3 581 aa24.3■■□□□ 1.48
RHBDD3-205ENST00000488106 OSBPL2Q9H1P3 480 aa24.3■■□□□ 1.48
RHBDD3-205ENST00000488106 PPARGC1AQ9UBK2 798 aaKnown RBP24.3■■□□□ 1.48
RHBDD3-205ENST00000488106 DNAH14Q0VDD8 3507 aa24.3■■□□□ 1.48
RHBDD3-205ENST00000488106 A0A087X0T9 212 aa24.29■■□□□ 1.48
RHBDD3-205ENST00000488106 SNAP91O60641 907 aa24.29■■□□□ 1.48
RHBDD3-205ENST00000488106 LRIG2O94898 1065 aa24.29■■□□□ 1.48
RHBDD3-205ENST00000488106 FAM228BP0C875 321 aa24.29■■□□□ 1.48
RHBDD3-205ENST00000488106 VAV1P15498 845 aa24.29■■□□□ 1.48
RHBDD3-205ENST00000488106 CD6P30203 668 aa24.29■■□□□ 1.48
RHBDD3-205ENST00000488106 LMNB2Q03252 620 aa24.29■■□□□ 1.48
RHBDD3-205ENST00000488106 LYSMD4Q5XG99 296 aa24.29■■□□□ 1.48
RHBDD3-205ENST00000488106 ZNF776Q68DI1 518 aaPredicted RBP24.29■■□□□ 1.48
RHBDD3-205ENST00000488106 METTL3Q86U44 580 aaKnown RBP24.29■■□□□ 1.48
RHBDD3-205ENST00000488106 OR7D4Q8NG98 312 aa24.29■■□□□ 1.48
RHBDD3-205ENST00000488106 PIGKQ92643 395 aa24.29■■□□□ 1.48
RHBDD3-205ENST00000488106 TBC1D31Q96DN5 1066 aa24.29■■□□□ 1.48
RHBDD3-205ENST00000488106 TOE1Q96GM8 510 aaKnown RBP24.29■■□□□ 1.48
RHBDD3-205ENST00000488106 PSMB7Q99436 277 aa24.29■■□□□ 1.48
RHBDD3-205ENST00000488106 ITM2CQ9NQX7 267 aa24.29■■□□□ 1.48
RHBDD3-205ENST00000488106 ZNF212Q9UDV6 495 aa24.29■■□□□ 1.48
RHBDD3-205ENST00000488106 VPS51Q9UID3 782 aa24.29■■□□□ 1.48
RHBDD3-205ENST00000488106 NEU3Q9UQ49 428 aa24.29■■□□□ 1.48
RHBDD3-205ENST00000488106 TMEM191CA6NGB0 347 aa24.28■■□□□ 1.48
RHBDD3-205ENST00000488106 TPM1P09493 284 aa24.28■■□□□ 1.48
RHBDD3-205ENST00000488106 ARID5BQ14865 1188 aa24.28■■□□□ 1.48
RHBDD3-205ENST00000488106 ACCSLQ4AC99 568 aa24.28■■□□□ 1.48
RHBDD3-205ENST00000488106 PLA2G2CQ5R387 149 aa24.28■■□□□ 1.48
RHBDD3-205ENST00000488106 C9orf64Q5T6V5 341 aa24.28■■□□□ 1.48
RHBDD3-205ENST00000488106 TCEAL6Q6IPX3 200 aa24.28■■□□□ 1.48
RHBDD3-205ENST00000488106 C12orf50Q8NA57 414 aaPredicted RBP24.28■■□□□ 1.48
RHBDD3-205ENST00000488106 TCEAL3Q969E4 200 aa24.28■■□□□ 1.48
RHBDD3-205ENST00000488106 HSPA12BQ96MM6 686 aa24.28■■□□□ 1.48
RHBDD3-205ENST00000488106 C2orf49Q9BVC5 232 aaPredicted RBP24.28■■□□□ 1.48
RHBDD3-205ENST00000488106 RSPH9Q9H1X1 276 aaPredicted RBP24.28■■□□□ 1.48
RHBDD3-205ENST00000488106 VPS45Q9NRW7 570 aa24.28■■□□□ 1.48
RHBDD3-205ENST00000488106 FZD10Q9ULW2 581 aa24.28■■□□□ 1.48
RHBDD3-205ENST00000488106 TMEM131Q92545 1883 aa24.28■■□□□ 1.48
RHBDD3-205ENST00000488106 DNTTP04053 509 aa24.27■■□□□ 1.48
RHBDD3-205ENST00000488106 ZNF806P0C7X5 589 aa24.27■■□□□ 1.48
RHBDD3-205ENST00000488106 GLDCP23378 1020 aa24.27■■□□□ 1.48
RHBDD3-205ENST00000488106 ITPKAP23677 461 aa24.27■■□□□ 1.48
RHBDD3-205ENST00000488106 EIF4A3P38919 411 aaKnown RBP24.27■■□□□ 1.48
RHBDD3-205ENST00000488106 KRT83P78385 493 aa24.27■■□□□ 1.48
RHBDD3-205ENST00000488106 TTC31Q49AM3 519 aaPredicted RBP24.27■■□□□ 1.48
RHBDD3-205ENST00000488106 SLC41A1Q8IVJ1 513 aa24.27■■□□□ 1.48
RHBDD3-205ENST00000488106 STK40Q8N2I9 435 aa24.27■■□□□ 1.48
RHBDD3-205ENST00000488106 DCAF4L2Q8NA75 395 aa24.27■■□□□ 1.48
RHBDD3-205ENST00000488106 DNAJC7Q99615 494 aa24.27■■□□□ 1.48
RHBDD3-205ENST00000488106 SPON2Q9BUD6 331 aa24.27■■□□□ 1.48
RHBDD3-205ENST00000488106 GPR174Q9BXC1 333 aa24.27■■□□□ 1.48
RHBDD3-205ENST00000488106 THAP2Q9H0W7 228 aa24.27■■□□□ 1.48
RHBDD3-205ENST00000488106 MRPL47Q9HD33 250 aaKnown RBP24.27■■□□□ 1.48
RHBDD3-205ENST00000488106 GPATCH2LQ9NWQ4 482 aa24.27■■□□□ 1.48
RHBDD3-205ENST00000488106 DNAI1Q9UI46 699 aa24.27■■□□□ 1.48
RHBDD3-205ENST00000488106 PCDH15Q96QU1 1955 aa24.27■■□□□ 1.48
RHBDD3-205ENST00000488106 ILVBLA1L0T0 632 aa24.26■■□□□ 1.47
RHBDD3-205ENST00000488106 TARSL2A2RTX5 802 aaKnown RBP24.26■■□□□ 1.47
RHBDD3-205ENST00000488106 CREB3O43889 395 aa24.26■■□□□ 1.47
RHBDD3-205ENST00000488106 RNASEH1O60930 286 aaKnown RBP24.26■■□□□ 1.47
RHBDD3-205ENST00000488106 RHOQP17081 205 aa24.26■■□□□ 1.47
RHBDD3-205ENST00000488106 OXTRP30559 389 aa24.26■■□□□ 1.47
RHBDD3-205ENST00000488106 HNRNPH3P31942 346 aaKnown RBP24.26■■□□□ 1.47
RHBDD3-205ENST00000488106 PSMD8P48556 350 aa24.26■■□□□ 1.47
RHBDD3-205ENST00000488106 GNA12Q03113 381 aa24.26■■□□□ 1.47
RHBDD3-205ENST00000488106 ZNF33AQ06730 810 aa24.26■■□□□ 1.47
RHBDD3-205ENST00000488106 AASDHQ4L235 1098 aaPredicted RBP24.26■■□□□ 1.47
RHBDD3-205ENST00000488106 SPDYCQ5MJ68 293 aa24.26■■□□□ 1.47
RHBDD3-205ENST00000488106 CCDC122Q5T0U0 273 aa24.26■■□□□ 1.47
RHBDD3-205ENST00000488106 ALKBH5Q6P6C2 394 aaKnown RBP24.26■■□□□ 1.47
RHBDD3-205ENST00000488106 LINGO4Q6UY18 593 aa24.26■■□□□ 1.47
RHBDD3-205ENST00000488106 MMAAQ8IVH4 418 aaKnown RBP24.26■■□□□ 1.47
RHBDD3-205ENST00000488106 SH2D3CQ8N5H7 860 aa24.26■■□□□ 1.47
RHBDD3-205ENST00000488106 OR8K1Q8NGG5 319 aa24.26■■□□□ 1.47
RHBDD3-205ENST00000488106 PTPRN2Q92932 1015 aa24.26■■□□□ 1.47
RHBDD3-205ENST00000488106 TRIM5Q9C035 493 aa24.26■■□□□ 1.47
RHBDD3-205ENST00000488106 ATP13A1Q9HD20 1204 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms