RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 VAV1P15498 845 aa24.36■■□□□ 1.49
RNF38-208ENST00000488058 ENGP17813 658 aa24.36■■□□□ 1.49
RNF38-208ENST00000488058 OR1E1P30953 314 aa24.36■■□□□ 1.49
RNF38-208ENST00000488058 PI4KAP42356 2102 aa24.36■■□□□ 1.49
RNF38-208ENST00000488058 PSMD8P48556 350 aa24.36■■□□□ 1.49
RNF38-208ENST00000488058 FOXK2Q01167 660 aa24.36■■□□□ 1.49
RNF38-208ENST00000488058 ARID5BQ14865 1188 aa24.36■■□□□ 1.49
RNF38-208ENST00000488058 CST6Q15828 149 aa24.36■■□□□ 1.49
RNF38-208ENST00000488058 SKOR2Q2VWA4 1001 aaPredicted RBP24.36■■□□□ 1.49
RNF38-208ENST00000488058 UAP1L1Q3KQV9 507 aa24.36■■□□□ 1.49
RNF38-208ENST00000488058 STRADAQ7RTN6 431 aa24.36■■□□□ 1.49
RNF38-208ENST00000488058 MCOLN2Q8IZK6 566 aa24.36■■□□□ 1.49
RNF38-208ENST00000488058 CADM4Q8NFZ8 388 aa24.36■■□□□ 1.49
RNF38-208ENST00000488058 PTPRN2Q92932 1015 aa24.36■■□□□ 1.49
RNF38-208ENST00000488058 MCEEQ96PE7 176 aa24.36■■□□□ 1.49
RNF38-208ENST00000488058 GTPBP2Q9BX10 602 aaKnown RBP24.36■■□□□ 1.49
RNF38-208ENST00000488058 BTBD1Q9H0C5 482 aa24.36■■□□□ 1.49
RNF38-208ENST00000488058 PABPC3Q9H361 631 aaKnown RBP24.36■■□□□ 1.49
RNF38-208ENST00000488058 HAUS4Q9H6D7 363 aa24.36■■□□□ 1.49
RNF38-208ENST00000488058 OR51B4Q9Y5P0 310 aa24.36■■□□□ 1.49
RNF38-208ENST00000488058 DOCK4Q8N1I0 1966 aa24.35■■□□□ 1.49
RNF38-208ENST00000488058 SIGLEC16A6NMB1 481 aa24.35■■□□□ 1.49
RNF38-208ENST00000488058 METTL12A8MUP2 240 aa24.35■■□□□ 1.49
RNF38-208ENST00000488058 MID1O15344 667 aa24.35■■□□□ 1.49
RNF38-208ENST00000488058 SERPINF2P08697 491 aa24.35■■□□□ 1.49
RNF38-208ENST00000488058 GNSP15586 552 aa24.35■■□□□ 1.49
RNF38-208ENST00000488058 RRM1P23921 792 aa24.35■■□□□ 1.49
RNF38-208ENST00000488058 ADRA1BP35368 520 aa24.35■■□□□ 1.49
RNF38-208ENST00000488058 ATXN3P54252 364 aaPredicted RBP24.35■■□□□ 1.49
RNF38-208ENST00000488058 UBASH3AP57075 661 aa24.35■■□□□ 1.49
RNF38-208ENST00000488058 KRT83P78385 493 aa24.35■■□□□ 1.49
RNF38-208ENST00000488058 GFPT1Q06210 699 aaPredicted RBP24.35■■□□□ 1.49
RNF38-208ENST00000488058 C6orf118Q5T5N4 469 aa24.35■■□□□ 1.49
RNF38-208ENST00000488058 E4F1Q66K89 784 aaPredicted RBP24.35■■□□□ 1.49
RNF38-208ENST00000488058 DCUN1D2Q6PH85 259 aa24.35■■□□□ 1.49
RNF38-208ENST00000488058 ZYG11BQ9C0D3 744 aa24.35■■□□□ 1.49
RNF38-208ENST00000488058 C6orf106Q9H6K1 298 aaPredicted RBP24.35■■□□□ 1.49
RNF38-208ENST00000488058 FBXL12Q9NXK8 326 aa24.35■■□□□ 1.49
RNF38-208ENST00000488058 SUSD2Q9UGT4 822 aa24.35■■□□□ 1.49
RNF38-208ENST00000488058 NUMA1Q14980 2115 aa24.34■■□□□ 1.49
RNF38-208ENST00000488058 IGLV3-10A0A075B6K4 115 aa24.34■■□□□ 1.49
RNF38-208ENST00000488058 A0A1W2PP55 124 aa24.34■■□□□ 1.49
RNF38-208ENST00000488058 CCP110O43303 1012 aa24.34■■□□□ 1.49
RNF38-208ENST00000488058 BNIP3LO60238 219 aa24.34■■□□□ 1.49
RNF38-208ENST00000488058 SNAP91O60641 907 aa24.34■■□□□ 1.49
RNF38-208ENST00000488058 SEMA4FO95754 770 aa24.34■■□□□ 1.49
RNF38-208ENST00000488058 HDAC4P56524 1084 aa24.34■■□□□ 1.49
RNF38-208ENST00000488058 KLHL30Q0D2K2 578 aa24.34■■□□□ 1.49
RNF38-208ENST00000488058 PPM1JQ5JR12 505 aa24.34■■□□□ 1.49
RNF38-208ENST00000488058 DAB2IPQ5VWQ8 1189 aa24.34■■□□□ 1.49
RNF38-208ENST00000488058 RWDD4Q6NW29 188 aaKnown RBP24.34■■□□□ 1.49
RNF38-208ENST00000488058 SCYL2Q6P3W7 929 aa24.34■■□□□ 1.49
RNF38-208ENST00000488058 SETD3Q86TU7 594 aaPredicted RBP24.34■■□□□ 1.49
RNF38-208ENST00000488058 DRC7Q8IY82 874 aa24.34■■□□□ 1.49
RNF38-208ENST00000488058 ZCCHC9Q8N567 271 aaKnown RBP24.34■■□□□ 1.49
RNF38-208ENST00000488058 CCDC185Q8N715 623 aa24.34■■□□□ 1.49
RNF38-208ENST00000488058 OMDQ99983 421 aa24.34■■□□□ 1.49
RNF38-208ENST00000488058 SYT11Q9BT88 431 aa24.34■■□□□ 1.49
RNF38-208ENST00000488058 C2orf49Q9BVC5 232 aaPredicted RBP24.34■■□□□ 1.49
RNF38-208ENST00000488058 TTYH3Q9C0H2 523 aa24.34■■□□□ 1.49
RNF38-208ENST00000488058 AIPL1Q9NZN9 384 aa24.34■■□□□ 1.49
RNF38-208ENST00000488058 OR12D3Q9UGF7 316 aa24.34■■□□□ 1.49
RNF38-208ENST00000488058 SCML1Q9UN30 329 aa24.34■■□□□ 1.49
RNF38-208ENST00000488058 DCHS1Q96JQ0 3298 aa24.34■■□□□ 1.49
RNF38-208ENST00000488058 A0A0D9SEW6 157 aa24.33■■□□□ 1.49
RNF38-208ENST00000488058 TCRBV5S1A1TA0A578 114 aa24.33■■□□□ 1.49
RNF38-208ENST00000488058 FAM47DPA6NHR8 397 aa24.33■■□□□ 1.49
RNF38-208ENST00000488058 CDX4O14627 284 aaPredicted RBP24.33■■□□□ 1.49
RNF38-208ENST00000488058 ATMINO43313 823 aaPredicted RBP24.33■■□□□ 1.49
RNF38-208ENST00000488058 IL1BP01584 269 aa24.33■■□□□ 1.49
RNF38-208ENST00000488058 SKILP12757 684 aa24.33■■□□□ 1.49
RNF38-208ENST00000488058 SLC8A1P32418 973 aa24.33■■□□□ 1.49
RNF38-208ENST00000488058 RPL7AP62424 266 aaKnown RBP24.33■■□□□ 1.49
RNF38-208ENST00000488058 DLG2Q15700 870 aa24.33■■□□□ 1.49
RNF38-208ENST00000488058 PPP1R2P3Q6NXS1 205 aa24.33■■□□□ 1.49
RNF38-208ENST00000488058 ZNF571Q7Z3V5 609 aaPredicted RBP24.33■■□□□ 1.49
RNF38-208ENST00000488058 DNAAF5Q86Y56 855 aa24.33■■□□□ 1.49
RNF38-208ENST00000488058 OR7D4Q8NG98 312 aa24.33■■□□□ 1.49
RNF38-208ENST00000488058 CENPIQ92674 756 aaPredicted RBP24.33■■□□□ 1.49
RNF38-208ENST00000488058 FAM129BQ96TA1 746 aa24.33■■□□□ 1.49
RNF38-208ENST00000488058 PSMB7Q99436 277 aa24.33■■□□□ 1.49
RNF38-208ENST00000488058 SPON2Q9BUD6 331 aa24.33■■□□□ 1.49
RNF38-208ENST00000488058 MAGEB5Q9BZ81 275 aa24.33■■□□□ 1.49
RNF38-208ENST00000488058 EDEM3Q9BZQ6 932 aa24.33■■□□□ 1.49
RNF38-208ENST00000488058 SGK2Q9HBY8 427 aa24.33■■□□□ 1.49
RNF38-208ENST00000488058 EIF2B4Q9UI10 523 aaKnown RBP24.33■■□□□ 1.49
RNF38-208ENST00000488058 VPS51Q9UID3 782 aa24.33■■□□□ 1.49
RNF38-208ENST00000488058 RNASEH2AO75792 299 aaKnown RBP24.32■■□□□ 1.48
RNF38-208ENST00000488058 FSBPO95073 299 aa24.32■■□□□ 1.48
RNF38-208ENST00000488058 SFSWAPQ12872 951 aaKnown RBP24.32■■□□□ 1.48
RNF38-208ENST00000488058 ELAVL3Q14576 367 aaKnown RBP24.32■■□□□ 1.48
RNF38-208ENST00000488058 Q6ZVU0 165 aa24.32■■□□□ 1.48
RNF38-208ENST00000488058 USP30Q70CQ3 517 aa24.32■■□□□ 1.48
RNF38-208ENST00000488058 SH2D3CQ8N5H7 860 aa24.32■■□□□ 1.48
RNF38-208ENST00000488058 ATP11CQ8NB49 1132 aa24.32■■□□□ 1.48
RNF38-208ENST00000488058 FRS2Q8WU20 508 aa24.32■■□□□ 1.48
RNF38-208ENST00000488058 DNASE2BQ8WZ79 361 aa24.32■■□□□ 1.48
RNF38-208ENST00000488058 OR8D1Q8WZ84 308 aa24.32■■□□□ 1.48
RNF38-208ENST00000488058 CAPN10Q9HC96 672 aa24.32■■□□□ 1.48
RNF38-208ENST00000488058 IFNKQ9P0W0 207 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms