RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 PDCD7Q8N8D1 485 aaKnown RBP9.66□□□□□ -0.86
SF3B1-211ENST00000487698 MAML1Q92585 1016 aa9.66□□□□□ -0.86
SF3B1-211ENST00000487698 WBP2Q969T9 261 aa9.66□□□□□ -0.86
SF3B1-211ENST00000487698 LRRC39Q96DD0 335 aa9.66□□□□□ -0.86
SF3B1-211ENST00000487698 SIGLEC10Q96LC7 697 aa9.66□□□□□ -0.86
SF3B1-211ENST00000487698 PRICKLE1Q96MT3 831 aaPredicted RBP9.66□□□□□ -0.86
SF3B1-211ENST00000487698 SLC22A12Q96S37 553 aa9.66□□□□□ -0.86
SF3B1-211ENST00000487698 RETREG1Q9H6L5 497 aa9.66□□□□□ -0.86
SF3B1-211ENST00000487698 LGALS13Q9UHV8 139 aa9.66□□□□□ -0.86
SF3B1-211ENST00000487698 STOML2Q9UJZ1 356 aa9.66□□□□□ -0.86
SF3B1-211ENST00000487698 CHMP2BQ9UQN3 213 aa9.66□□□□□ -0.86
SF3B1-211ENST00000487698 ERI2A8K979 691 aaKnown RBP9.65□□□□□ -0.86
SF3B1-211ENST00000487698 F5H423 210 aaPredicted RBP9.65□□□□□ -0.86
SF3B1-211ENST00000487698 GREM1O60565 184 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 SUN1O94901 812 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 C1RP00736 705 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 AGTP01019 485 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 LRG1P02750 347 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 CCNB1P14635 433 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 MYOGP15173 224 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 NFKB1P19838 968 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 NR1D1P20393 614 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 GCAP28676 217 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 SSTR1P30872 391 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 CORO1AP31146 461 aaKnown RBP9.65□□□□□ -0.86
SF3B1-211ENST00000487698 SLCO1A2P46721 670 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 C9orf50Q5SZB4 431 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 FAM109BQ6ICB4 259 aaPredicted RBP9.65□□□□□ -0.86
SF3B1-211ENST00000487698 TIGD7Q6NT04 549 aaPredicted RBP9.65□□□□□ -0.86
SF3B1-211ENST00000487698 RFWD3Q6PCD5 774 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 KDM7AQ6ZMT4 941 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 CIR1Q86X95 450 aaPredicted RBP9.65□□□□□ -0.86
SF3B1-211ENST00000487698 DENND1CQ8IV53 801 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 LGI2Q8N0V4 545 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 ADAMTS19Q8TE59 1207 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 HMCESQ96FZ2 354 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 AGAP3Q96P47 875 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 MLPHQ9BV36 600 aaPredicted RBP9.65□□□□□ -0.86
SF3B1-211ENST00000487698 ACSS3Q9H6R3 686 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 VPS37BQ9H9H4 285 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 PLAC1Q9HBJ0 212 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 GKN1Q9NS71 199 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 FETUBQ9UGM5 382 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 RSPH14Q9UHP6 348 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 IPO11Q9UI26 975 aaKnown RBP9.65□□□□□ -0.86
SF3B1-211ENST00000487698 MYLKQ15746 1914 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 TLDC2A0PJX2 215 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 ARHGAP42A6NI28 874 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 SMIM23A6NLE4 172 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 RASA4BC9J798 803 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 H3BNC9 293 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 NRG2O14511 850 aaPredicted RBP9.65□□□□□ -0.86
SF3B1-211ENST00000487698 GRM6O15303 877 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 RGS16O15492 202 aaPredicted RBP9.65□□□□□ -0.86
SF3B1-211ENST00000487698 RASA4O43374 803 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 AP2A1O95782 977 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 LATS1O95835 1130 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 JCHAINP01591 159 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 RB1P06400 928 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 MBL2P11226 248 aaPredicted RBP9.65□□□□□ -0.86
SF3B1-211ENST00000487698 GABRR2P28476 465 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 PHBP35232 272 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 IFNAR2P48551 515 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 RASA2Q15283 850 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 PARP15Q460N3 678 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 DNAJC21Q5F1R6 531 aaKnown RBP9.65□□□□□ -0.86
SF3B1-211ENST00000487698 TXNDC8Q6A555 127 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 LRRC8BQ6P9F7 803 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 RTL10Q7L3V2 364 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 TDRPQ86YL5 185 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 HS6ST3Q8IZP7 471 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 CCDC77Q9BR77 488 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 PPCSQ9HAB8 311 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 CTNNAL1Q9UBT7 734 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 RABGEF1Q9UJ41 708 aa9.65□□□□□ -0.86
SF3B1-211ENST00000487698 AGO1Q9UL18 857 aaKnown RBP9.65□□□□□ -0.86
SF3B1-211ENST00000487698 NOVA2Q9UNW9 492 aaKnown RBP9.65□□□□□ -0.86
SF3B1-211ENST00000487698 EXOC1LA0A1B0GW35 172 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 GRXCR1A8MXD5 290 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 CDH16O75309 829 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 SPAG6O75602 509 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 C1QAP02745 245 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 IRS1P35568 1242 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 LMAN1P49257 510 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 YBEYP58557 167 aaPredicted RBP9.64□□□□□ -0.87
SF3B1-211ENST00000487698 MAGOHP61326 146 aaKnown RBP9.64□□□□□ -0.87
SF3B1-211ENST00000487698 SARNPP82979 210 aaKnown RBP9.64□□□□□ -0.87
SF3B1-211ENST00000487698 SKOR1P84550 965 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 ZXDBP98169 803 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 CYP4F8P98187 520 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 TNK2Q07912 1038 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 SERINC3Q13530 473 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 TERF2Q15554 542 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 RABGAP1LQ5R372 815 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 ADGRF1Q5T601 910 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 Q6ZNB5 142 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 CAPN12Q6ZSI9 719 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 C3orf62Q6ZUJ4 267 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 PALM2Q8IXS6 379 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 RIBC1Q8N443 379 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms