RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 PCDHA11Q9Y5I1 949 aa20.82■□□□□ 0.92
PHF1-209ENST00000487667 INSL5Q9Y5Q6 135 aa20.82■□□□□ 0.92
PHF1-209ENST00000487667 MAD1L1Q9Y6D9 718 aa20.82■□□□□ 0.92
PHF1-209ENST00000487667 MAGEB16A2A368 324 aa20.82■□□□□ 0.92
PHF1-209ENST00000487667 KRT15P19012 456 aa20.82■□□□□ 0.92
PHF1-209ENST00000487667 GBP2P32456 591 aaPredicted RBP20.82■□□□□ 0.92
PHF1-209ENST00000487667 ZBTB17Q13105 803 aa20.82■□□□□ 0.92
PHF1-209ENST00000487667 ARMC3Q5W041 872 aa20.82■□□□□ 0.92
PHF1-209ENST00000487667 TRABD2AQ86V40 505 aa20.82■□□□□ 0.92
PHF1-209ENST00000487667 NETO2Q8NC67 525 aa20.82■□□□□ 0.92
PHF1-209ENST00000487667 CFAP36Q96G28 342 aa20.82■□□□□ 0.92
PHF1-209ENST00000487667 RPRD1AQ96P16 312 aaPredicted RBP20.82■□□□□ 0.92
PHF1-209ENST00000487667 AGAP3Q96P47 875 aa20.82■□□□□ 0.92
PHF1-209ENST00000487667 INTS9Q9NV88 658 aaKnown RBP20.82■□□□□ 0.92
PHF1-209ENST00000487667 HAUS2Q9NVX0 235 aa20.82■□□□□ 0.92
PHF1-209ENST00000487667 BFARQ9NZS9 450 aa20.82■□□□□ 0.92
PHF1-209ENST00000487667 MPP6Q9NZW5 540 aa20.82■□□□□ 0.92
PHF1-209ENST00000487667 CTNNAL1Q9UBT7 734 aa20.82■□□□□ 0.92
PHF1-209ENST00000487667 SMG5Q9UPR3 1016 aaKnown RBP20.82■□□□□ 0.92
PHF1-209ENST00000487667 NR2E3Q9Y5X4 410 aa20.82■□□□□ 0.92
PHF1-209ENST00000487667 ACSL4O60488 711 aa20.81■□□□□ 0.92
PHF1-209ENST00000487667 INHBAP08476 426 aa20.81■□□□□ 0.92
PHF1-209ENST00000487667 BRAFP15056 766 aa20.81■□□□□ 0.92
PHF1-209ENST00000487667 PGAM1P18669 254 aa20.81■□□□□ 0.92
PHF1-209ENST00000487667 TACR2P21452 398 aa20.81■□□□□ 0.92
PHF1-209ENST00000487667 NPY2RP49146 381 aa20.81■□□□□ 0.92
PHF1-209ENST00000487667 RENBPP51606 427 aa20.81■□□□□ 0.92
PHF1-209ENST00000487667 TWF1Q12792 350 aa20.81■□□□□ 0.92
PHF1-209ENST00000487667 NAB1Q13506 487 aa20.81■□□□□ 0.92
PHF1-209ENST00000487667 HNRNPDQ14103 355 aaKnown RBP20.81■□□□□ 0.92
PHF1-209ENST00000487667 RABGAP1LQ5R372 815 aa20.81■□□□□ 0.92
PHF1-209ENST00000487667 RAP1GAP2Q684P5 730 aa20.81■□□□□ 0.92
PHF1-209ENST00000487667 STEAP4Q687X5 459 aa20.81■□□□□ 0.92
PHF1-209ENST00000487667 KCTD11Q693B1 232 aa20.81■□□□□ 0.92
PHF1-209ENST00000487667 CCDC149Q6ZUS6 474 aa20.81■□□□□ 0.92
PHF1-209ENST00000487667 ZSCAN18Q8TBC5 510 aaPredicted RBP20.81■□□□□ 0.92
PHF1-209ENST00000487667 SLC44A1Q8WWI5 657 aa20.81■□□□□ 0.92
PHF1-209ENST00000487667 ALKBH8Q96BT7 664 aaKnown RBP20.81■□□□□ 0.92
PHF1-209ENST00000487667 FCRL5Q96RD9 977 aa20.81■□□□□ 0.92
PHF1-209ENST00000487667 CEP41Q9BYV8 373 aa20.81■□□□□ 0.92
PHF1-209ENST00000487667 MTIF3Q9H2K0 278 aaKnown RBP20.81■□□□□ 0.92
PHF1-209ENST00000487667 SAMD15Q9P1V8 674 aa20.81■□□□□ 0.92
PHF1-209ENST00000487667 IPO11Q9UI26 975 aaKnown RBP20.81■□□□□ 0.92
PHF1-209ENST00000487667 ZNF180Q9UJW8 692 aa20.81■□□□□ 0.92
PHF1-209ENST00000487667 LZTS1Q9Y250 596 aa20.81■□□□□ 0.92
PHF1-209ENST00000487667 RWDD3Q9Y3V2 267 aa20.81■□□□□ 0.92
PHF1-209ENST00000487667 LATS1O95835 1130 aa20.8■□□□□ 0.92
PHF1-209ENST00000487667 HMBSP08397 361 aa20.8■□□□□ 0.92
PHF1-209ENST00000487667 CHN1P15882 459 aa20.8■□□□□ 0.92
PHF1-209ENST00000487667 SYN1P17600 705 aa20.8■□□□□ 0.92
PHF1-209ENST00000487667 NFKB1P19838 968 aa20.8■□□□□ 0.92
PHF1-209ENST00000487667 PAPOLAP51003 745 aaKnown RBP20.8■□□□□ 0.92
PHF1-209ENST00000487667 C16orf59Q7L2K0 433 aa20.8■□□□□ 0.92
PHF1-209ENST00000487667 LRRC6Q86X45 466 aa20.8■□□□□ 0.92
PHF1-209ENST00000487667 SMC6Q96SB8 1091 aa20.8■□□□□ 0.92
PHF1-209ENST00000487667 RAD9AQ99638 391 aa20.8■□□□□ 0.92
PHF1-209ENST00000487667 FAM107BQ9H098 131 aa20.8■□□□□ 0.92
PHF1-209ENST00000487667 NKIRAS1Q9NYS0 192 aa20.8■□□□□ 0.92
PHF1-209ENST00000487667 TEX28O15482 410 aa20.8■□□□□ 0.92
PHF1-209ENST00000487667 ADH1AP07327 375 aa20.8■□□□□ 0.92
PHF1-209ENST00000487667 CD68P34810 354 aaPredicted RBP20.8■□□□□ 0.92
PHF1-209ENST00000487667 GEMP55040 296 aa20.8■□□□□ 0.92
PHF1-209ENST00000487667 COL13A1Q5TAT6 717 aaPredicted RBP20.8■□□□□ 0.92
PHF1-209ENST00000487667 UNC5AQ6ZN44 842 aa20.8■□□□□ 0.92
PHF1-209ENST00000487667 DNAJB7Q7Z6W7 309 aaPredicted RBP20.8■□□□□ 0.92
PHF1-209ENST00000487667 SLC26A11Q86WA9 606 aa20.8■□□□□ 0.92
PHF1-209ENST00000487667 SRRM1Q8IYB3 904 aaKnown RBP20.8■□□□□ 0.92
PHF1-209ENST00000487667 DEPDC1BQ8WUY9 529 aa20.8■□□□□ 0.92
PHF1-209ENST00000487667 CDKL2Q92772 493 aa20.8■□□□□ 0.92
PHF1-209ENST00000487667 TTC17Q96AE7 1141 aa20.8■□□□□ 0.92
PHF1-209ENST00000487667 HTATIP2Q9BUP3 242 aa20.8■□□□□ 0.92
PHF1-209ENST00000487667 CASS4Q9NQ75 786 aa20.8■□□□□ 0.92
PHF1-209ENST00000487667 COCHO43405 550 aa20.79■□□□□ 0.92
PHF1-209ENST00000487667 RAMP2O60895 175 aa20.79■□□□□ 0.92
PHF1-209ENST00000487667 FRG1Q14331 258 aaKnown RBP20.79■□□□□ 0.92
PHF1-209ENST00000487667 KBTBD12Q3ZCT8 623 aa20.79■□□□□ 0.92
PHF1-209ENST00000487667 CASC4Q6P4E1 433 aa20.79■□□□□ 0.92
PHF1-209ENST00000487667 RTL10Q7L3V2 364 aa20.79■□□□□ 0.92
PHF1-209ENST00000487667 CYP4X1Q8N118 509 aa20.79■□□□□ 0.92
PHF1-209ENST00000487667 AGGF1Q8N302 714 aaeCLIP20.79■□□□□ 0.92
PHF1-209ENST00000487667 SP7Q8TDD2 431 aaPredicted RBP20.79■□□□□ 0.92
PHF1-209ENST00000487667 SGSM3Q96HU1 749 aa20.79■□□□□ 0.92
PHF1-209ENST00000487667 EMILIN2Q9BXX0 1053 aa20.79■□□□□ 0.92
PHF1-209ENST00000487667 CCDC134Q9H6E4 229 aa20.79■□□□□ 0.92
PHF1-209ENST00000487667 GLOD4Q9HC38 313 aa20.79■□□□□ 0.92
PHF1-209ENST00000487667 RRP15Q9Y3B9 282 aaKnown RBP20.79■□□□□ 0.92
PHF1-209ENST00000487667 TTLL3Q9Y4R7 772 aa20.79■□□□□ 0.92
PHF1-209ENST00000487667 TMEM120BA0PK00 339 aa20.78■□□□□ 0.92
PHF1-209ENST00000487667 PRPF4O43172 522 aaKnown RBP eCLIP20.78■□□□□ 0.929e-8■■■□□ 18.9
PHF1-209ENST00000487667 ALDH1A2O94788 518 aa20.78■□□□□ 0.92
PHF1-209ENST00000487667 OAS1P00973 400 aaKnown RBP20.78■□□□□ 0.92
PHF1-209ENST00000487667 POLBP06746 335 aa20.78■□□□□ 0.92
PHF1-209ENST00000487667 TNK2Q07912 1038 aa20.78■□□□□ 0.92
PHF1-209ENST00000487667 TTC39BQ5VTQ0 682 aaPredicted RBP20.78■□□□□ 0.92
PHF1-209ENST00000487667 DCAKDQ8WVC6 231 aa20.78■□□□□ 0.92
PHF1-209ENST00000487667 ABHD8Q96I13 439 aa20.78■□□□□ 0.92
PHF1-209ENST00000487667 TRABDQ9H4I3 376 aa20.78■□□□□ 0.92
PHF1-209ENST00000487667 KCNK9Q9NPC2 374 aa20.78■□□□□ 0.92
PHF1-209ENST00000487667 IRAK3Q9Y616 596 aa20.78■□□□□ 0.92
PHF1-209ENST00000487667 DOCK4Q8N1I0 1966 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms