RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 FURINP09958 794 aa6.05□□□□□ -1.44
COL4A3-206ENST00000487633 NME1P15531 152 aaKnown RBP6.05□□□□□ -1.44
COL4A3-206ENST00000487633 POLR2EP19388 210 aaKnown RBP6.05□□□□□ -1.44
COL4A3-206ENST00000487633 C5AR1P21730 350 aa6.05□□□□□ -1.44
COL4A3-206ENST00000487633 HOXD13P35453 343 aa6.05□□□□□ -1.44
COL4A3-206ENST00000487633 MLLT3P42568 568 aaPredicted RBP6.05□□□□□ -1.44
COL4A3-206ENST00000487633 HARS2P49590 506 aaKnown RBP6.05□□□□□ -1.44
COL4A3-206ENST00000487633 CASP4P49662 377 aa6.05□□□□□ -1.44
COL4A3-206ENST00000487633 KIF11P52732 1056 aa6.05□□□□□ -1.44
COL4A3-206ENST00000487633 RPS24P62847 133 aaKnown RBP6.05□□□□□ -1.44
COL4A3-206ENST00000487633 SFSWAPQ12872 951 aaKnown RBP6.05□□□□□ -1.44
COL4A3-206ENST00000487633 KLRB1Q12918 225 aa6.05□□□□□ -1.44
COL4A3-206ENST00000487633 NR0B2Q15466 257 aa6.05□□□□□ -1.44
COL4A3-206ENST00000487633 TRIP4Q15650 581 aaPredicted RBP6.05□□□□□ -1.44
COL4A3-206ENST00000487633 ARHGAP44Q17R89 818 aa6.05□□□□□ -1.44
COL4A3-206ENST00000487633 ZNF284Q2VY69 593 aa6.05□□□□□ -1.44
COL4A3-206ENST00000487633 DEFB109BQ30KR1 87 aa6.05□□□□□ -1.44
COL4A3-206ENST00000487633 NADK2Q4G0N4 442 aa6.05□□□□□ -1.44
COL4A3-206ENST00000487633 MPPE1Q53F39 396 aa6.05□□□□□ -1.44
COL4A3-206ENST00000487633 LACTB2Q53H82 288 aaPredicted RBP6.05□□□□□ -1.44
COL4A3-206ENST00000487633 FAM133BQ5BKY9 247 aaKnown RBP6.05□□□□□ -1.44
COL4A3-206ENST00000487633 PIP5KL1Q5T9C9 394 aa6.05□□□□□ -1.44
COL4A3-206ENST00000487633 ABI3BPQ7Z7G0 1075 aa6.05□□□□□ -1.44
COL4A3-206ENST00000487633 TMEM135Q86UB9 458 aa6.05□□□□□ -1.44
COL4A3-206ENST00000487633 KYQ8NBH2 561 aa6.05□□□□□ -1.44
COL4A3-206ENST00000487633 PRR7Q8TB68 274 aa6.05□□□□□ -1.44
COL4A3-206ENST00000487633 CPT1CQ8TCG5 803 aa6.05□□□□□ -1.44
COL4A3-206ENST00000487633 WFIKKN2Q8TEU8 576 aa6.05□□□□□ -1.44
COL4A3-206ENST00000487633 MARVELD3Q96A59 401 aa6.05□□□□□ -1.44
COL4A3-206ENST00000487633 GRAMD1AQ96CP6 724 aa6.05□□□□□ -1.44
COL4A3-206ENST00000487633 ANKRD36BP1Q96IX9 119 aa6.05□□□□□ -1.44
COL4A3-206ENST00000487633 SEMA6CQ9H3T2 930 aa6.05□□□□□ -1.44
COL4A3-206ENST00000487633 ST6GALNAC4Q9H4F1 302 aa6.05□□□□□ -1.44
COL4A3-206ENST00000487633 FBRSQ9HAH7 460 aa6.05□□□□□ -1.44
COL4A3-206ENST00000487633 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.05□□□□□ -1.44
COL4A3-206ENST00000487633 COMMD8Q9NX08 183 aa6.05□□□□□ -1.44
COL4A3-206ENST00000487633 LUZP4Q9P127 313 aa6.05□□□□□ -1.44
COL4A3-206ENST00000487633 SIRPGQ9P1W8 387 aa6.05□□□□□ -1.44
COL4A3-206ENST00000487633 STIM2Q9P246 746 aa6.05□□□□□ -1.44
COL4A3-206ENST00000487633 PPM1HQ9ULR3 514 aa6.05□□□□□ -1.44
COL4A3-206ENST00000487633 SCML1Q9UN30 329 aa6.05□□□□□ -1.44
COL4A3-206ENST00000487633 VPS4AQ9UN37 437 aa6.05□□□□□ -1.44
COL4A3-206ENST00000487633 USP3Q9Y6I4 520 aa6.05□□□□□ -1.44
COL4A3-206ENST00000487633 PRRC2CQ9Y520 2896 aaKnown RBP6.05□□□□□ -1.44
COL4A3-206ENST00000487633 ITIH6Q6UXX5 1313 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 LOC101059948A0A1B0GTJ6 334 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 TULP2O00295 520 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 YY2O15391 372 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 DNAJB5O75953 348 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 CYBBP04839 570 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 JMJD7P0C870 316 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 ALPPL2P10696 532 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 ITGB7P26010 798 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 UGT1A3P35503 534 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 NDST1P52848 882 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 ADKP55263 362 aaKnown RBP6.04□□□□□ -1.44
COL4A3-206ENST00000487633 ZFP36L1Q07352 338 aaKnown RBP6.04□□□□□ -1.44
COL4A3-206ENST00000487633 GOLGA8FQ08AF8 430 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 GOLGA8DPQ0D2H9 430 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 OVGP1Q12889 678 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 TESK1Q15569 626 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 HS1BP3Q53T59 392 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 PITRM1Q5JRX3 1037 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 L1TD1Q5T7N2 865 aaKnown RBP6.04□□□□□ -1.44
COL4A3-206ENST00000487633 PIK3R6Q5UE93 754 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 SPOPLQ6IQ16 392 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 SV2AQ7L0J3 742 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 PTAR1Q7Z6K3 402 aaPredicted RBP6.04□□□□□ -1.44
COL4A3-206ENST00000487633 CCDC83Q8IWF9 413 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 CFAP52Q8N1V2 620 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 GPD1LQ8N335 351 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 ZSCAN1Q8NBB4 408 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 GALNT11Q8NCW6 608 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 RCBTB1Q8NDN9 531 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 OR52K2Q8NGK3 314 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 FRS2Q8WU20 508 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 WASF1Q92558 559 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 TMA16Q96EY4 203 aaKnown RBP6.04□□□□□ -1.44
COL4A3-206ENST00000487633 LRRC61Q9BV99 259 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 DUSP23Q9BVJ7 150 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 CPEB1Q9BZB8 566 aaKnown RBP6.04□□□□□ -1.44
COL4A3-206ENST00000487633 FBXO44Q9H4M3 255 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 USP29Q9HBJ7 922 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 CUEDC1Q9NWM3 386 aaPredicted RBP6.04□□□□□ -1.44
COL4A3-206ENST00000487633 KCND2Q9NZV8 630 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 MARCH2Q9P0N8 246 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 SEPT10Q9P0V9 454 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 XPO7Q9UIA9 1087 aaKnown RBP6.04□□□□□ -1.44
COL4A3-206ENST00000487633 SALL4Q9UJQ4 1053 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 PADI4Q9UM07 663 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 DMTF1Q9Y222 760 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 MAP4K5Q9Y4K4 846 aa6.04□□□□□ -1.44
COL4A3-206ENST00000487633 NIPBLQ6KC79 2804 aaeCLIP6.03□□□□□ -1.44
COL4A3-206ENST00000487633 ANKHD1Q8IWZ3 2542 aaKnown RBP6.03□□□□□ -1.44
COL4A3-206ENST00000487633 TACC2O95359 2948 aa6.03□□□□□ -1.44
COL4A3-206ENST00000487633 VPS13CQ709C8 3753 aa6.03□□□□□ -1.44
COL4A3-206ENST00000487633 SPTY2D1-AS1A0A0U1RR47 76 aa6.03□□□□□ -1.44
COL4A3-206ENST00000487633 A0A1W2PQ27 194 aa6.03□□□□□ -1.44
COL4A3-206ENST00000487633 A0A1W2PQ64 194 aa6.03□□□□□ -1.44
COL4A3-206ENST00000487633 A0A1W2PQC6 194 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms