RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 ASLP04424 464 aa12.09□□□□□ -0.47
TRIM56-204ENST00000487252 HMBSP08397 361 aa12.09□□□□□ -0.47
TRIM56-204ENST00000487252 JMJD7P0C870 316 aa12.09□□□□□ -0.47
TRIM56-204ENST00000487252 PRF1P14222 555 aa12.09□□□□□ -0.47
TRIM56-204ENST00000487252 NME1P15531 152 aaKnown RBP12.09□□□□□ -0.47
TRIM56-204ENST00000487252 MZF1P28698 734 aaPredicted RBP12.09□□□□□ -0.47
TRIM56-204ENST00000487252 ETV5P41161 510 aa12.09□□□□□ -0.47
TRIM56-204ENST00000487252 KIF11P52732 1056 aa12.09□□□□□ -0.47
TRIM56-204ENST00000487252 METAP1P53582 386 aa12.09□□□□□ -0.47
TRIM56-204ENST00000487252 ST8SIA6P61647 398 aa12.09□□□□□ -0.47
TRIM56-204ENST00000487252 TNNC1P63316 161 aa12.09□□□□□ -0.47
TRIM56-204ENST00000487252 GUCY1B3Q02153 619 aa12.09□□□□□ -0.47
TRIM56-204ENST00000487252 ZNF542PQ5EBM4 170 aa12.09□□□□□ -0.47
TRIM56-204ENST00000487252 MPP7Q5T2T1 576 aa12.09□□□□□ -0.47
TRIM56-204ENST00000487252 AGBL4Q5VU57 503 aa12.09□□□□□ -0.47
TRIM56-204ENST00000487252 HEATR4Q86WZ0 1026 aa12.09□□□□□ -0.47
TRIM56-204ENST00000487252 WDR49Q8IV35 697 aa12.09□□□□□ -0.47
TRIM56-204ENST00000487252 SLC35F3Q8IY50 421 aa12.09□□□□□ -0.47
TRIM56-204ENST00000487252 SLC34A3Q8N130 599 aa12.09□□□□□ -0.47
TRIM56-204ENST00000487252 STK40Q8N2I9 435 aa12.09□□□□□ -0.47
TRIM56-204ENST00000487252 NECAB1Q8N987 351 aa12.09□□□□□ -0.47
TRIM56-204ENST00000487252 PTPRN2Q92932 1015 aa12.09□□□□□ -0.47
TRIM56-204ENST00000487252 TMA16Q96EY4 203 aaKnown RBP12.09□□□□□ -0.47
TRIM56-204ENST00000487252 DNAJC28Q9NX36 388 aa12.09□□□□□ -0.47
TRIM56-204ENST00000487252 RASAL2Q9UJF2 1139 aa12.09□□□□□ -0.47
TRIM56-204ENST00000487252 INTS6Q9UL03 887 aaKnown RBP12.09□□□□□ -0.47
TRIM56-204ENST00000487252 ATP6V1DQ9Y5K8 247 aa12.09□□□□□ -0.47
TRIM56-204ENST00000487252 USP3Q9Y6I4 520 aa12.09□□□□□ -0.47
TRIM56-204ENST00000487252 TTC34A8MYJ7 566 aa12.08□□□□□ -0.48
TRIM56-204ENST00000487252 TULP1O00294 542 aaPredicted RBP12.08□□□□□ -0.48
TRIM56-204ENST00000487252 AQP9O43315 295 aa12.08□□□□□ -0.48
TRIM56-204ENST00000487252 PRPF6O94906 941 aaKnown RBP12.08□□□□□ -0.48
TRIM56-204ENST00000487252 RALAP11233 206 aa12.08□□□□□ -0.48
TRIM56-204ENST00000487252 CCDC130P13994 396 aa12.08□□□□□ -0.48
TRIM56-204ENST00000487252 ITIH1P19827 911 aa12.08□□□□□ -0.48
TRIM56-204ENST00000487252 PDCP20941 246 aa12.08□□□□□ -0.48
TRIM56-204ENST00000487252 SGSHP51688 502 aa12.08□□□□□ -0.48
TRIM56-204ENST00000487252 TAS2R38P59533 333 aa12.08□□□□□ -0.48
TRIM56-204ENST00000487252 EFEMP1Q12805 493 aa12.08□□□□□ -0.48
TRIM56-204ENST00000487252 FZD2Q14332 565 aa12.08□□□□□ -0.48
TRIM56-204ENST00000487252 BMT2Q1RMZ1 405 aa12.08□□□□□ -0.48
TRIM56-204ENST00000487252 FOXD4L5Q5VV16 416 aaPredicted RBP12.08□□□□□ -0.48
TRIM56-204ENST00000487252 CAVIN1Q6NZI2 390 aaKnown RBP12.08□□□□□ -0.48
TRIM56-204ENST00000487252 GCNT7Q6ZNI0 430 aa12.08□□□□□ -0.48
TRIM56-204ENST00000487252 CLEC20AQ6ZU45 233 aa12.08□□□□□ -0.48
TRIM56-204ENST00000487252 FAM114A1Q8IWE2 563 aa12.08□□□□□ -0.48
TRIM56-204ENST00000487252 SLC2A14Q8TDB8 520 aa12.08□□□□□ -0.48
TRIM56-204ENST00000487252 FOXD4L4Q8WXT5 416 aaPredicted RBP12.08□□□□□ -0.48
TRIM56-204ENST00000487252 NKD1Q969G9 470 aa12.08□□□□□ -0.48
TRIM56-204ENST00000487252 TMEM159Q96B96 161 aa12.08□□□□□ -0.48
TRIM56-204ENST00000487252 PLD4Q96BZ4 506 aa12.08□□□□□ -0.48
TRIM56-204ENST00000487252 HEXIM2Q96MH2 286 aaKnown RBP12.08□□□□□ -0.48
TRIM56-204ENST00000487252 CALN1Q9BXU9 219 aa12.08□□□□□ -0.48
TRIM56-204ENST00000487252 FOXP3Q9BZS1 431 aa12.08□□□□□ -0.48
TRIM56-204ENST00000487252 MARCH2Q9P0N8 246 aa12.08□□□□□ -0.48
TRIM56-204ENST00000487252 KLF15Q9UIH9 416 aa12.08□□□□□ -0.48
TRIM56-204ENST00000487252 EXOC7Q9UPT5 735 aa12.08□□□□□ -0.48
TRIM56-204ENST00000487252 LOXL2Q9Y4K0 774 aa12.08□□□□□ -0.48
TRIM56-204ENST00000487252 SLC26A4O43511 780 aa12.07□□□□□ -0.48
TRIM56-204ENST00000487252 TBCAO75347 108 aaKnown RBP12.07□□□□□ -0.48
TRIM56-204ENST00000487252 LDLRP01130 860 aa12.07□□□□□ -0.48
TRIM56-204ENST00000487252 IL1BP01584 269 aa12.07□□□□□ -0.48
TRIM56-204ENST00000487252 SRPRAP08240 638 aaKnown RBP12.07□□□□□ -0.48
TRIM56-204ENST00000487252 CSKP41240 450 aa12.07□□□□□ -0.48
TRIM56-204ENST00000487252 RPIAP49247 311 aa12.07□□□□□ -0.48
TRIM56-204ENST00000487252 ZFP36L1Q07352 338 aaKnown RBP12.07□□□□□ -0.48
TRIM56-204ENST00000487252 ELAVL3Q14576 367 aaKnown RBP12.07□□□□□ -0.48
TRIM56-204ENST00000487252 SURF1Q15526 300 aa12.07□□□□□ -0.48
TRIM56-204ENST00000487252 ZNF284Q2VY69 593 aa12.07□□□□□ -0.48
TRIM56-204ENST00000487252 DEFB133Q30KQ1 61 aa12.07□□□□□ -0.48
TRIM56-204ENST00000487252 ADGRF1Q5T601 910 aa12.07□□□□□ -0.48
TRIM56-204ENST00000487252 ACOT1Q86TX2 421 aa12.07□□□□□ -0.48
TRIM56-204ENST00000487252 DCP2Q8IU60 420 aaKnown RBP12.07□□□□□ -0.48
TRIM56-204ENST00000487252 CRYBG2Q8N1P7 616 aa12.07□□□□□ -0.48
TRIM56-204ENST00000487252 GPD1LQ8N335 351 aa12.07□□□□□ -0.48
TRIM56-204ENST00000487252 FAM174AQ8TBP5 190 aa12.07□□□□□ -0.48
TRIM56-204ENST00000487252 USP7Q93009 1102 aa12.07□□□□□ -0.48
TRIM56-204ENST00000487252 TMEM74Q96NL1 305 aa12.07□□□□□ -0.48
TRIM56-204ENST00000487252 ACCSQ96QU6 501 aa12.07□□□□□ -0.48
TRIM56-204ENST00000487252 LLPHQ9BRT6 129 aaKnown RBP12.07□□□□□ -0.48
TRIM56-204ENST00000487252 SRRTQ9BXP5 876 aaKnown RBP12.07□□□□□ -0.48
TRIM56-204ENST00000487252 PANK2Q9BZ23 570 aa12.07□□□□□ -0.48
TRIM56-204ENST00000487252 IRX2Q9BZI1 471 aaPredicted RBP12.07□□□□□ -0.48
TRIM56-204ENST00000487252 ZHX3Q9H4I2 956 aa12.07□□□□□ -0.48
TRIM56-204ENST00000487252 VRTNQ9H8Y1 702 aa12.07□□□□□ -0.48
TRIM56-204ENST00000487252 TMEM63CQ9P1W3 806 aa12.07□□□□□ -0.48
TRIM56-204ENST00000487252 NOL7Q9UMY1 257 aaKnown RBP12.07□□□□□ -0.48
TRIM56-204ENST00000487252 ERVW-1Q9UQF0 538 aa12.07□□□□□ -0.48
TRIM56-204ENST00000487252 ZNF106Q9H2Y7 1883 aaKnown RBP12.06□□□□□ -0.48
TRIM56-204ENST00000487252 SPTY2D1-AS1A0A0U1RR47 76 aa12.06□□□□□ -0.48
TRIM56-204ENST00000487252 A0A1W2PQM1 296 aa12.06□□□□□ -0.48
TRIM56-204ENST00000487252 SLC31A1O15431 190 aa12.06□□□□□ -0.48
TRIM56-204ENST00000487252 LATS1O95835 1130 aa12.06□□□□□ -0.48
TRIM56-204ENST00000487252 LIFP15018 202 aa12.06□□□□□ -0.48
TRIM56-204ENST00000487252 PRLRP16471 622 aa12.06□□□□□ -0.48
TRIM56-204ENST00000487252 TIPARPQ7Z3E1 657 aaKnown RBP12.06□□□□□ -0.48
TRIM56-204ENST00000487252 SFR1Q86XK3 245 aa12.06□□□□□ -0.48
TRIM56-204ENST00000487252 ZNF557Q8N988 423 aaPredicted RBP12.06□□□□□ -0.48
TRIM56-204ENST00000487252 FIBINQ8TAL6 211 aa12.06□□□□□ -0.48
TRIM56-204ENST00000487252 GPBAR1Q8TDU6 330 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms