RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 ARHGEF37A1IGU5 675 aa26.68■■□□□ 1.86
HLA-C-208ENST00000487245 PRR5-ARHGAP8B1AHC4 643 aa26.68■■□□□ 1.86
HLA-C-208ENST00000487245 ITM2AO43736 263 aa26.68■■□□□ 1.86
HLA-C-208ENST00000487245 CIB2O75838 187 aa26.68■■□□□ 1.86
HLA-C-208ENST00000487245 CYP2C18P33260 490 aa26.68■■□□□ 1.86
HLA-C-208ENST00000487245 HARS2P49590 506 aaKnown RBP26.68■■□□□ 1.86
HLA-C-208ENST00000487245 CDK7P50613 346 aa26.68■■□□□ 1.86
HLA-C-208ENST00000487245 CACNA2D1P54289 1103 aa26.68■■□□□ 1.86
HLA-C-208ENST00000487245 ALDH18A1P54886 795 aaKnown RBP26.68■■□□□ 1.86
HLA-C-208ENST00000487245 ARHGAP8P85298 464 aa26.68■■□□□ 1.86
HLA-C-208ENST00000487245 THOC5Q13769 683 aaKnown RBP26.68■■□□□ 1.86
HLA-C-208ENST00000487245 CCDC153Q494R4 210 aa26.68■■□□□ 1.86
HLA-C-208ENST00000487245 FBXO27Q8NI29 283 aa26.68■■□□□ 1.86
HLA-C-208ENST00000487245 FAM136AQ96C01 138 aa26.68■■□□□ 1.86
HLA-C-208ENST00000487245 CEP41Q9BYV8 373 aa26.68■■□□□ 1.86
HLA-C-208ENST00000487245 GPAMQ9HCL2 828 aa26.68■■□□□ 1.86
HLA-C-208ENST00000487245 ANLNQ9NQW6 1124 aa26.68■■□□□ 1.86
HLA-C-208ENST00000487245 TMEM30AQ9NV96 361 aa26.68■■□□□ 1.86
HLA-C-208ENST00000487245 TXNDC16Q9P2K2 825 aa26.68■■□□□ 1.86
HLA-C-208ENST00000487245 ANGPTL2Q9UKU9 493 aa26.68■■□□□ 1.86
HLA-C-208ENST00000487245 LRCH1Q9Y2L9 728 aa26.68■■□□□ 1.86
HLA-C-208ENST00000487245 AP3B1O00203 1094 aa26.67■■□□□ 1.86
HLA-C-208ENST00000487245 PDE1BQ01064 536 aa26.67■■□□□ 1.86
HLA-C-208ENST00000487245 MAPRE1Q15691 268 aaKnown RBP26.67■■□□□ 1.86
HLA-C-208ENST00000487245 BSPRYQ5W0U4 402 aa26.67■■□□□ 1.86
HLA-C-208ENST00000487245 TRIM68Q6AZZ1 485 aa26.67■■□□□ 1.86
HLA-C-208ENST00000487245 IRGCQ6NXR0 463 aa26.67■■□□□ 1.86
HLA-C-208ENST00000487245 DCLRE1AQ6PJP8 1040 aa26.67■■□□□ 1.86
HLA-C-208ENST00000487245 ULK2Q8IYT8 1036 aa26.67■■□□□ 1.86
HLA-C-208ENST00000487245 NETO2Q8NC67 525 aa26.67■■□□□ 1.86
HLA-C-208ENST00000487245 UROC1Q96N76 676 aa26.67■■□□□ 1.86
HLA-C-208ENST00000487245 RTP3Q9BQQ7 232 aa26.67■■□□□ 1.86
HLA-C-208ENST00000487245 FAM167BQ9BTA0 163 aa26.67■■□□□ 1.86
HLA-C-208ENST00000487245 MAGEB16A2A368 324 aa26.66■■□□□ 1.86
HLA-C-208ENST00000487245 KCNK1O00180 336 aa26.66■■□□□ 1.86
HLA-C-208ENST00000487245 PSMD3O43242 534 aa26.66■■□□□ 1.86
HLA-C-208ENST00000487245 RABGGTBP53611 331 aa26.66■■□□□ 1.86
HLA-C-208ENST00000487245 ACTR3P61158 418 aa26.66■■□□□ 1.86
HLA-C-208ENST00000487245 COG7P83436 770 aa26.66■■□□□ 1.86
HLA-C-208ENST00000487245 ZNF33AQ06730 810 aa26.66■■□□□ 1.86
HLA-C-208ENST00000487245 LBRQ14739 615 aaKnown RBP26.66■■□□□ 1.86
HLA-C-208ENST00000487245 CAPRIN2Q6IMN6 1127 aaKnown RBP26.66■■□□□ 1.86
HLA-C-208ENST00000487245 MYLK4Q86YV6 388 aaPredicted RBP26.66■■□□□ 1.86
HLA-C-208ENST00000487245 PPP4R1Q8TF05 950 aa26.66■■□□□ 1.86
HLA-C-208ENST00000487245 SORT1Q99523 831 aa26.66■■□□□ 1.86
HLA-C-208ENST00000487245 OSBPL2Q9H1P3 480 aa26.66■■□□□ 1.86
HLA-C-208ENST00000487245 GBA3Q9H227 469 aa26.66■■□□□ 1.86
HLA-C-208ENST00000487245 AGO3Q9H9G7 860 aaKnown RBP26.66■■□□□ 1.86
HLA-C-208ENST00000487245 DMAP1Q9NPF5 467 aaPredicted RBP26.66■■□□□ 1.86
HLA-C-208ENST00000487245 CASS4Q9NQ75 786 aa26.66■■□□□ 1.86
HLA-C-208ENST00000487245 COPG2Q9UBF2 871 aa26.66■■□□□ 1.86
HLA-C-208ENST00000487245 OR12D3Q9UGF7 316 aa26.66■■□□□ 1.86
HLA-C-208ENST00000487245 SKIP12755 728 aa26.66■■□□□ 1.86
HLA-C-208ENST00000487245 CPOXP36551 454 aa26.66■■□□□ 1.86
HLA-C-208ENST00000487245 NPY2RP49146 381 aa26.66■■□□□ 1.86
HLA-C-208ENST00000487245 IRX4P78413 519 aa26.66■■□□□ 1.86
HLA-C-208ENST00000487245 RCN2Q14257 317 aa26.66■■□□□ 1.86
HLA-C-208ENST00000487245 PPFIBP2Q8ND30 876 aa26.66■■□□□ 1.86
HLA-C-208ENST00000487245 MICAL1Q8TDZ2 1067 aa26.66■■□□□ 1.86
HLA-C-208ENST00000487245 RBBP8Q99708 897 aa26.66■■□□□ 1.86
HLA-C-208ENST00000487245 TKTL2Q9H0I9 626 aa26.66■■□□□ 1.86
HLA-C-208ENST00000487245 PADI3Q9ULW8 664 aa26.66■■□□□ 1.86
HLA-C-208ENST00000487245 APOBEC2Q9Y235 224 aaKnown RBP26.66■■□□□ 1.86
HLA-C-208ENST00000487245 RPS6KL1Q9Y6S9 549 aa26.66■■□□□ 1.86
HLA-C-208ENST00000487245 SEC23IPQ9Y6Y8 1000 aaKnown RBP26.66■■□□□ 1.86
HLA-C-208ENST00000487245 MYO18AQ92614 2054 aaKnown RBP26.65■■□□□ 1.86
HLA-C-208ENST00000487245 I6L893 689 aaPredicted RBP26.65■■□□□ 1.86
HLA-C-208ENST00000487245 LYPLA1O75608 230 aaPredicted RBP26.65■■□□□ 1.86
HLA-C-208ENST00000487245 PGK1P00558 417 aa26.65■■□□□ 1.86
HLA-C-208ENST00000487245 KDSRQ06136 332 aa26.65■■□□□ 1.86
HLA-C-208ENST00000487245 KLC1Q07866 573 aa26.65■■□□□ 1.86
HLA-C-208ENST00000487245 GRIK3Q13003 919 aa26.65■■□□□ 1.86
HLA-C-208ENST00000487245 DSC3Q14574 896 aa26.65■■□□□ 1.86
HLA-C-208ENST00000487245 TMEM135Q86UB9 458 aa26.65■■□□□ 1.86
HLA-C-208ENST00000487245 TP53INP2Q8IXH6 220 aa26.65■■□□□ 1.86
HLA-C-208ENST00000487245 SCG3Q8WXD2 468 aaKnown RBP26.65■■□□□ 1.86
HLA-C-208ENST00000487245 GORASP1Q9BQQ3 440 aa26.65■■□□□ 1.86
HLA-C-208ENST00000487245 SOX13Q9UN79 622 aa26.65■■□□□ 1.86
HLA-C-208ENST00000487245 M0QZQ0 153 aa26.64■■□□□ 1.86
HLA-C-208ENST00000487245 USP1O94782 785 aa26.64■■□□□ 1.86
HLA-C-208ENST00000487245 KCNA4P22459 653 aa26.64■■□□□ 1.86
HLA-C-208ENST00000487245 TYK2P29597 1187 aa26.64■■□□□ 1.86
HLA-C-208ENST00000487245 SPRP35270 261 aaPredicted RBP26.64■■□□□ 1.86
HLA-C-208ENST00000487245 SERPINB8P50452 374 aa26.64■■□□□ 1.86
HLA-C-208ENST00000487245 KCTD11Q693B1 232 aa26.64■■□□□ 1.86
HLA-C-208ENST00000487245 C10orf107Q8IVU9 208 aa26.64■■□□□ 1.86
HLA-C-208ENST00000487245 THEM5Q8N1Q8 247 aa26.64■■□□□ 1.86
HLA-C-208ENST00000487245 OR52K1Q8NGK4 314 aa26.64■■□□□ 1.86
HLA-C-208ENST00000487245 EDEM1Q92611 657 aa26.64■■□□□ 1.86
HLA-C-208ENST00000487245 FCRL3Q96P31 734 aaPredicted RBP26.64■■□□□ 1.86
HLA-C-208ENST00000487245 TMEM216Q9P0N5 145 aa26.64■■□□□ 1.86
HLA-C-208ENST00000487245 VANGL2Q9ULK5 521 aa26.64■■□□□ 1.86
HLA-C-208ENST00000487245 A0A0U1RQF3 1178 aa26.64■■□□□ 1.85
HLA-C-208ENST00000487245 ZBTB24O43167 697 aaPredicted RBP26.64■■□□□ 1.85
HLA-C-208ENST00000487245 B3GAT3O94766 335 aa26.64■■□□□ 1.85
HLA-C-208ENST00000487245 SLC10A3P09131 477 aa26.64■■□□□ 1.85
HLA-C-208ENST00000487245 DNAJB2P25686 324 aa26.64■■□□□ 1.85
HLA-C-208ENST00000487245 CDC25CP30307 473 aa26.64■■□□□ 1.85
HLA-C-208ENST00000487245 THPOP40225 353 aa26.64■■□□□ 1.85
HLA-C-208ENST00000487245 LIMK2P53671 638 aa26.64■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms