RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 MTMR10Q9NXD2 777 aa12.64□□□□□ -0.39
HSPG2-211ENST00000486901 CLDN5O00501 218 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 TIPRLO75663 272 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 TGM2P21980 687 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 ACAT1P24752 427 aaKnown RBP12.63□□□□□ -0.39
HSPG2-211ENST00000486901 LMO2P25791 158 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 TPP2P29144 1249 aaPredicted RBP12.63□□□□□ -0.39
HSPG2-211ENST00000486901 SERPINB9P50453 376 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 PPP1R3AQ16821 1122 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 SH2D4BQ5SQS7 431 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 MAP3K21Q5TCX8 1036 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 RDM1Q8NG50 284 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 KHSRPQ92945 711 aaKnown RBP eCLIP12.63□□□□□ -0.39
HSPG2-211ENST00000486901 NT5C1AQ9BXI3 368 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 SENP6Q9GZR1 1112 aaPredicted RBP12.63□□□□□ -0.39
HSPG2-211ENST00000486901 GOLGA2P5Q9HBQ8 144 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 PDGFCQ9NRA1 345 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 DCDC2Q9UHG0 476 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 NRXN2Q9P2S2 1712 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 PTPRAP18433 802 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 RGS2P41220 211 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 SLC10A6Q3KNW5 377 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 NCBP2-AS2Q69YL0 99 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 ZPBP2Q6X784 338 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 ANKRD23Q86SG2 305 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 NMRAL1Q9HBL8 299 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 HESX1Q9UBX0 185 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 RUVBL2Q9Y230 463 aaKnown RBP12.63□□□□□ -0.39
HSPG2-211ENST00000486901 NME7Q9Y5B8 376 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 TFEBP19484 476 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 YAP1P46937 504 aaKnown RBP12.63□□□□□ -0.39
HSPG2-211ENST00000486901 ENTPD1P49961 510 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 USP10Q14694 798 aaKnown RBP12.63□□□□□ -0.39
HSPG2-211ENST00000486901 FSCBQ5H9T9 825 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 SH3D19Q5HYK7 790 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 OGFRL1Q5TC84 451 aaPredicted RBP12.63□□□□□ -0.39
HSPG2-211ENST00000486901 OLFML1Q6UWY5 402 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 IFNEQ86WN2 208 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 SLC41A1Q8IVJ1 513 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 ZNF567Q8N184 647 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 MCUQ8NE86 351 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 NLRP7Q8WX94 980 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 SPATA33Q96N06 139 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 TEPSINQ96N21 525 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 CHCHD3Q9NX63 227 aaKnown RBP12.63□□□□□ -0.39
HSPG2-211ENST00000486901 EPS15L1Q9UBC2 864 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 HACL1Q9UJ83 578 aa12.63□□□□□ -0.39
HSPG2-211ENST00000486901 BCLAF3A2AJT9 711 aaKnown RBP12.62□□□□□ -0.39
HSPG2-211ENST00000486901 ZNF839A8K0R7 811 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 MAFO75444 373 aaPredicted RBP12.62□□□□□ -0.39
HSPG2-211ENST00000486901 TRMUO75648 421 aaKnown RBP12.62□□□□□ -0.39
HSPG2-211ENST00000486901 TMCC1O94876 653 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 PIGRP01833 764 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 GNAO1P09471 354 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 FAM91A1Q658Y4 838 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 PPP1R2P3Q6NXS1 205 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 EPGNQ6UW88 154 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 LPCAT2Q7L5N7 544 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 NT5DC4Q86YG4 428 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 DENND6AQ8IWF6 608 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 LRRC43Q8N309 656 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 NCSTNQ92542 709 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 PHF21BQ96EK2 531 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 CDHR1Q96JP9 859 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 FERMT1Q9BQL6 677 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 FTHL17Q9BXU8 183 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 EGFL7Q9UHF1 273 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 MTF2Q9Y483 593 aaPredicted RBP12.62□□□□□ -0.39
HSPG2-211ENST00000486901 ARHGEF37A1IGU5 675 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 C9IYK1 514 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 FAM72CH0Y354 149 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 ENDOD1O94919 500 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 VDRP11473 427 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 PSMC3P17980 439 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 NR4A1P22736 598 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 IGFBP6P24592 240 aaPredicted RBP12.62□□□□□ -0.39
HSPG2-211ENST00000486901 ARL4AP40617 200 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 GJA9P57773 515 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 PLOD1Q02809 727 aaPredicted RBP12.62□□□□□ -0.39
HSPG2-211ENST00000486901 PDAP1Q13442 181 aaKnown RBP12.62□□□□□ -0.39
HSPG2-211ENST00000486901 ADGRE1Q14246 886 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 PTK2BQ14289 1009 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 GRM3Q14832 879 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 TMEM132DQ14C87 1099 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 TBCCQ15814 346 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 FAM72AQ5TYM5 149 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 SEL1L3Q68CR1 1132 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 FAM72DQ6L9T8 149 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 FAM72BQ86X60 149 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 MICALL2Q8IY33 904 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 URGCPQ8TCY9 931 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 PDCD6IPQ8WUM4 868 aaKnown RBP12.62□□□□□ -0.39
HSPG2-211ENST00000486901 EMID1Q96A84 441 aaPredicted RBP12.62□□□□□ -0.39
HSPG2-211ENST00000486901 ILKAPQ9H0C8 392 aaPredicted RBP12.62□□□□□ -0.39
HSPG2-211ENST00000486901 SPON1Q9HCB6 807 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 DPP3Q9NY33 737 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 EVPLQ92817 2033 aa12.62□□□□□ -0.39
HSPG2-211ENST00000486901 G3V2L1 256 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 CCL22O00626 93 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 TRIM13O60858 407 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms