RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 ALG3Q92685 438 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 MAGOHBQ96A72 148 aaKnown RBP7.14□□□□□ -1.27
UBR4-214ENST00000486515 ZFRQ96KR1 1074 aaKnown RBP7.14□□□□□ -1.27
UBR4-214ENST00000486515 C2orf49Q9BVC5 232 aaPredicted RBP7.14□□□□□ -1.27
UBR4-214ENST00000486515 SLC2A11Q9BYW1 496 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 BRD8Q9H0E9 1235 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 RAB6CQ9H0N0 254 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 TMPRSS4Q9NRS4 437 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 TMEM248Q9NWD8 314 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 MPP6Q9NZW5 540 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 CALCOCO1Q9P1Z2 691 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 KIAA1522Q9P206 1035 aaPredicted RBP7.14□□□□□ -1.27
UBR4-214ENST00000486515 BCCIPQ9P287 314 aaKnown RBP eCLIP7.14□□□□□ -1.27
UBR4-214ENST00000486515 LIMD1Q9UGP4 676 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 XPO7Q9UIA9 1087 aaKnown RBP7.14□□□□□ -1.27
UBR4-214ENST00000486515 SLC25A13Q9UJS0 675 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 STOML2Q9UJZ1 356 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 VPS28Q9UK41 221 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 ZMIZ1Q9ULJ6 1067 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 TTC7AQ9ULT0 858 aaPredicted RBP7.14□□□□□ -1.27
UBR4-214ENST00000486515 ZNF148Q9UQR1 794 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 SSUH2Q9Y2M2 353 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 NUMBLQ9Y6R0 609 aa7.14□□□□□ -1.27
UBR4-214ENST00000486515 IGLV3-10A0A075B6K4 115 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 CFAP69A5D8W1 941 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 DRGXA6NNA5 263 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 WASH4PA8MWX3 477 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 HACD1B0YJ81 288 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 C2CD4DB7Z1M9 353 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 NDC80O14777 642 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 LUC7L3O95232 432 aaKnown RBP7.13□□□□□ -1.27
UBR4-214ENST00000486515 ATP5BP06576 529 aaKnown RBP7.13□□□□□ -1.27
UBR4-214ENST00000486515 CD48P09326 243 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 AMPD1P23109 780 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 MARCKSL1P49006 195 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 DGKGP49619 791 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 EIF3EP60228 445 aaKnown RBP7.13□□□□□ -1.27
UBR4-214ENST00000486515 ST8SIA6P61647 398 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 SULT2A1Q06520 285 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 FCHO2Q0JRZ9 810 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 AP1B1Q10567 949 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 DHCR24Q15392 516 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 PPP1R7Q15435 360 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 LY6G5CQ5SRR4 150 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 TMCO4Q5TGY1 634 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 HEATR6Q6AI08 1181 aaKnown RBP7.13□□□□□ -1.27
UBR4-214ENST00000486515 NADSYN1Q6IA69 706 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 PARM1Q6UWI2 310 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 VITQ6UXI7 678 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 BBS12Q6ZW61 710 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 MAATS1Q7Z4T9 603 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 METTL3Q86U44 580 aaKnown RBP7.13□□□□□ -1.27
UBR4-214ENST00000486515 ZC3H18Q86VM9 953 aaKnown RBP7.13□□□□□ -1.27
UBR4-214ENST00000486515 CPNE8Q86YQ8 564 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 ADGRG2Q8IZP9 1017 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 RASGEF1CQ8N431 466 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 CCHCR1Q8TD31 782 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 COG1Q8WTW3 980 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 UCMAQ8WVF2 138 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 TFB1MQ8WVM0 346 aaKnown RBP7.13□□□□□ -1.27
UBR4-214ENST00000486515 FGF14Q92915 247 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 MSANTD3Q96H12 275 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 SPON2Q9BUD6 331 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 ADAM33Q9BZ11 813 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 MAGEH1Q9H213 219 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 LINC00597Q9H2U6 94 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 EBF3Q9H4W6 596 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 ECT2Q9H8V3 914 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 SP110Q9HB58 689 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 ATP13A1Q9HD20 1204 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 ARHGEF4Q9NR80 690 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 DNAJC17Q9NVM6 304 aaKnown RBP7.13□□□□□ -1.27
UBR4-214ENST00000486515 PLK2Q9NYY3 685 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 SEPT10Q9P0V9 454 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 DEC1Q9P2X7 70 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 CDH22Q9UJ99 828 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 PLA2G4CQ9UP65 541 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 FARP1Q9Y4F1 1045 aaPredicted RBP7.13□□□□□ -1.27
UBR4-214ENST00000486515 SNX10Q9Y5X0 201 aa7.13□□□□□ -1.27
UBR4-214ENST00000486515 SMG1Q96Q15 3661 aaKnown RBP7.12□□□□□ -1.27
UBR4-214ENST00000486515 ILVBLA1L0T0 632 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 GOLGA6CA6NDK9 693 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 GOLGA6BA6NDN3 693 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 TBC1D3BA6NDS4 549 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 ZSCAN5CA6NGD5 496 aaPredicted RBP7.12□□□□□ -1.27
UBR4-214ENST00000486515 FAM72CH0Y354 149 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 SGK1O00141 431 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 TAF4O00268 1085 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 STK25O00506 426 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 ZNF185O15231 689 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 ZBTB24O43167 697 aaPredicted RBP7.12□□□□□ -1.27
UBR4-214ENST00000486515 KRT38O76015 456 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 GOLGA6DP0CG33 693 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 POLR2EP19388 210 aaKnown RBP7.12□□□□□ -1.27
UBR4-214ENST00000486515 SLC6A4P31645 630 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 STIP1P31948 543 aaKnown RBP7.12□□□□□ -1.27
UBR4-214ENST00000486515 CHRNA3P32297 505 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 ARSEP51690 589 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 RPS24P62847 133 aaKnown RBP7.12□□□□□ -1.27
UBR4-214ENST00000486515 GNA12Q03113 381 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms