RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 ZFHX3Q15911 3703 aa8.58□□□□□ -1.04
XRN1-212ENST00000486211 NYNRINQ9P2P1 1898 aaKnown RBP8.57□□□□□ -1.04
XRN1-212ENST00000486211 NF1P21359 2839 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 TBC1D3DA0A087WVF3 549 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 TBC1D3IA0A087WXS9 549 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 TBC1D3EA0A087X179 549 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 TBC1D3KA0A087X1G2 549 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 CPED1A4D0V7 1026 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 VPS37CA5D8V6 355 aaPredicted RBP8.57□□□□□ -1.04
XRN1-212ENST00000486211 TBC1D3FA6NER0 549 aaPredicted RBP8.57□□□□□ -1.04
XRN1-212ENST00000486211 TBC1D3LB9A6J9 549 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 PRAMEF26H0Y7S4 382 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 NTN3O00634 580 aaPredicted RBP8.57□□□□□ -1.04
XRN1-212ENST00000486211 NVLO15381 856 aaKnown RBP8.57□□□□□ -1.04
XRN1-212ENST00000486211 RNASEH1O60930 286 aaKnown RBP8.57□□□□□ -1.04
XRN1-212ENST00000486211 SEMA7AO75326 666 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 TBCAO75347 108 aaKnown RBP8.57□□□□□ -1.04
XRN1-212ENST00000486211 REC8O95072 547 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 ATP5BP06576 529 aaKnown RBP8.57□□□□□ -1.04
XRN1-212ENST00000486211 TBC1D3HP0C7X1 549 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 CCDC130P13994 396 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 HGFP14210 728 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 CD70P32970 193 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 NUDT1P36639 197 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 PSMD8P48556 350 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 METAP1P53582 386 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 COG7P83436 770 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 DHX8Q14562 1220 aaKnown RBP8.57□□□□□ -1.04
XRN1-212ENST00000486211 MCM6Q14566 821 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 DRAP1Q14919 205 aaPredicted RBP8.57□□□□□ -1.04
XRN1-212ENST00000486211 DUOXA2Q1HG44 320 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 WDR72Q3MJ13 1102 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 POM121L1PQ3SYA9 428 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 MPPE1Q53F39 396 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 FHL5Q5TD97 284 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 ZNF385CQ66K41 422 aaPredicted RBP8.57□□□□□ -1.04
XRN1-212ENST00000486211 TBC1D3GQ6DHY5 549 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 CAPRIN2Q6IMN6 1127 aaKnown RBP8.57□□□□□ -1.04
XRN1-212ENST00000486211 TBC1D3CQ6IPX1 549 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 ZCCHC8Q6NZY4 707 aaKnown RBP8.57□□□□□ -1.04
XRN1-212ENST00000486211 TRAPPC11Q7Z392 1133 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 ATCAYQ86WG3 371 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 TRIM69Q86WT6 500 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 SFR1Q86XK3 245 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 JAMLQ86YT9 394 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 SRRM1Q8IYB3 904 aaKnown RBP8.57□□□□□ -1.04
XRN1-212ENST00000486211 TBC1D3Q8IZP1 549 aaPredicted RBP8.57□□□□□ -1.04
XRN1-212ENST00000486211 SLC22A18ASQ8N1D0 253 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 FBXO39Q8N4B4 442 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 XYLT2Q9H1B5 865 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 SMYD3Q9H7B4 428 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 ZNF395Q9H8N7 513 aaPredicted RBP8.57□□□□□ -1.04
XRN1-212ENST00000486211 RASAL2Q9UJF2 1139 aa8.57□□□□□ -1.04
XRN1-212ENST00000486211 NOL7Q9UMY1 257 aaKnown RBP8.57□□□□□ -1.04
XRN1-212ENST00000486211 UBE4BO95155 1302 aa8.56□□□□□ -1.04
XRN1-212ENST00000486211 SLC12A8A0AV02 714 aa8.56□□□□□ -1.04
XRN1-212ENST00000486211 NEMP2A6NFY4 417 aa8.56□□□□□ -1.04
XRN1-212ENST00000486211 WIPF3A6NGB9 483 aa8.56□□□□□ -1.04
XRN1-212ENST00000486211 EPB41L2O43491 1005 aaKnown RBP8.56□□□□□ -1.04
XRN1-212ENST00000486211 PLRG1O43660 514 aaKnown RBP8.56□□□□□ -1.04
XRN1-212ENST00000486211 STAU1O95793 577 aaKnown RBP8.56□□□□□ -1.04
XRN1-212ENST00000486211 C5AR1P21730 350 aa8.56□□□□□ -1.04
XRN1-212ENST00000486211 SGSHP51688 502 aa8.56□□□□□ -1.04
XRN1-212ENST00000486211 TNNC1P63316 161 aa8.56□□□□□ -1.04
XRN1-212ENST00000486211 EFEMP1Q12805 493 aa8.56□□□□□ -1.04
XRN1-212ENST00000486211 EIF3IQ13347 325 aaKnown RBP8.56□□□□□ -1.04
XRN1-212ENST00000486211 L1TD1Q5T7N2 865 aaKnown RBP8.56□□□□□ -1.04
XRN1-212ENST00000486211 C1QL3Q5VWW1 255 aa8.56□□□□□ -1.04
XRN1-212ENST00000486211 RAB11FIP2Q7L804 512 aa8.56□□□□□ -1.04
XRN1-212ENST00000486211 ZFAND4Q86XD8 727 aa8.56□□□□□ -1.04
XRN1-212ENST00000486211 CBWD2Q8IUF1 395 aa8.56□□□□□ -1.04
XRN1-212ENST00000486211 WDR49Q8IV35 697 aa8.56□□□□□ -1.04
XRN1-212ENST00000486211 OR13H1Q8NG92 308 aa8.56□□□□□ -1.04
XRN1-212ENST00000486211 SLC2A14Q8TDB8 520 aa8.56□□□□□ -1.04
XRN1-212ENST00000486211 TTC17Q96AE7 1141 aa8.56□□□□□ -1.04
XRN1-212ENST00000486211 CDK5RAP3Q96JB5 506 aa8.56□□□□□ -1.04
XRN1-212ENST00000486211 NOX5Q96PH1 765 aa8.56□□□□□ -1.04
XRN1-212ENST00000486211 ACCSQ96QU6 501 aa8.56□□□□□ -1.04
XRN1-212ENST00000486211 SDCBP2Q9H190 292 aa8.56□□□□□ -1.04
XRN1-212ENST00000486211 PCIF1Q9H4Z3 704 aa8.56□□□□□ -1.04
XRN1-212ENST00000486211 ZNF71Q9NQZ8 489 aaPredicted RBP8.56□□□□□ -1.04
XRN1-212ENST00000486211 CLIC5Q9NZA1 410 aa8.56□□□□□ -1.04
XRN1-212ENST00000486211 SEPT10Q9P0V9 454 aa8.56□□□□□ -1.04
XRN1-212ENST00000486211 STOML2Q9UJZ1 356 aa8.56□□□□□ -1.04
XRN1-212ENST00000486211 NAGPAQ9UK23 515 aa8.56□□□□□ -1.04
XRN1-212ENST00000486211 INTS6Q9UL03 887 aaKnown RBP8.56□□□□□ -1.04
XRN1-212ENST00000486211 PCDHA5Q9Y5H7 936 aa8.56□□□□□ -1.04
XRN1-212ENST00000486211 FBN3Q75N90 2809 aa8.55□□□□□ -1.04
XRN1-212ENST00000486211 PRAMEF33A0A0G2JMD5 474 aa8.55□□□□□ -1.04
XRN1-212ENST00000486211 TARSL2A2RTX5 802 aaKnown RBP8.55□□□□□ -1.04
XRN1-212ENST00000486211 TTC34A8MYJ7 566 aa8.55□□□□□ -1.04
XRN1-212ENST00000486211 PRAMEF10O60809 474 aa8.55□□□□□ -1.04
XRN1-212ENST00000486211 RNGTTO60942 597 aaKnown RBP8.55□□□□□ -1.04
XRN1-212ENST00000486211 PRPF6O94906 941 aaKnown RBP8.55□□□□□ -1.04
XRN1-212ENST00000486211 CLDN1O95832 211 aa8.55□□□□□ -1.04
XRN1-212ENST00000486211 KRT18P05783 430 aaKnown RBP8.55□□□□□ -1.04
XRN1-212ENST00000486211 KRT7P08729 469 aa8.55□□□□□ -1.04
XRN1-212ENST00000486211 POLR2EP19388 210 aaKnown RBP8.55□□□□□ -1.04
XRN1-212ENST00000486211 MZF1P28698 734 aaPredicted RBP8.55□□□□□ -1.04
XRN1-212ENST00000486211 CASP5P51878 434 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms