RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 IGLV3-19P01714 112 aa18.13■□□□□ 0.49
COL6A1-204ENST00000486023 SYPP08247 313 aa18.13■□□□□ 0.49
COL6A1-204ENST00000486023 GPD1P21695 349 aa18.13■□□□□ 0.49
COL6A1-204ENST00000486023 RFC1P35251 1148 aaPredicted RBP18.13■□□□□ 0.49
COL6A1-204ENST00000486023 NOVA1P51513 510 aaKnown RBP18.13■□□□□ 0.49
COL6A1-204ENST00000486023 PLK1P53350 603 aa18.13■□□□□ 0.49
COL6A1-204ENST00000486023 KRT83P78385 493 aa18.13■□□□□ 0.49
COL6A1-204ENST00000486023 PTP4A2Q12974 167 aa18.13■□□□□ 0.49
COL6A1-204ENST00000486023 IQCB1Q15051 598 aa18.13■□□□□ 0.49
COL6A1-204ENST00000486023 DLG2Q15700 870 aa18.13■□□□□ 0.49
COL6A1-204ENST00000486023 ASIC2Q16515 512 aa18.13■□□□□ 0.49
COL6A1-204ENST00000486023 POM121L1PQ3SYA9 428 aa18.13■□□□□ 0.49
COL6A1-204ENST00000486023 PEAR1Q5VY43 1037 aaPredicted RBP18.13■□□□□ 0.49
COL6A1-204ENST00000486023 DNAJC24Q6P3W2 148 aa18.13■□□□□ 0.49
COL6A1-204ENST00000486023 LINGO4Q6UY18 593 aa18.13■□□□□ 0.49
COL6A1-204ENST00000486023 PHF13Q86YI8 300 aaPredicted RBP18.13■□□□□ 0.49
COL6A1-204ENST00000486023 MINDY1Q8N5J2 469 aa18.13■□□□□ 0.49
COL6A1-204ENST00000486023 ATP11CQ8NB49 1132 aa18.13■□□□□ 0.49
COL6A1-204ENST00000486023 FAM172AQ8WUF8 416 aa18.13■□□□□ 0.49
COL6A1-204ENST00000486023 ALG14Q96F25 216 aa18.13■□□□□ 0.49
COL6A1-204ENST00000486023 C1orf74Q96LT6 269 aa18.13■□□□□ 0.49
COL6A1-204ENST00000486023 HAPLN3Q96S86 360 aa18.13■□□□□ 0.49
COL6A1-204ENST00000486023 FAM129BQ96TA1 746 aa18.13■□□□□ 0.49
COL6A1-204ENST00000486023 FUCA2Q9BTY2 467 aa18.13■□□□□ 0.49
COL6A1-204ENST00000486023 MAGEB5Q9BZ81 275 aa18.13■□□□□ 0.49
COL6A1-204ENST00000486023 NEUROG2Q9H2A3 272 aa18.13■□□□□ 0.49
COL6A1-204ENST00000486023 CAPN10Q9HC96 672 aa18.13■□□□□ 0.49
COL6A1-204ENST00000486023 TBC1D30Q9Y2I9 924 aa18.13■□□□□ 0.49
COL6A1-204ENST00000486023 A0A0D9SEW6 157 aa18.12■□□□□ 0.49
COL6A1-204ENST00000486023 A0A1B0GTW7 788 aa18.12■□□□□ 0.49
COL6A1-204ENST00000486023 ANKRD62A6NC57 917 aa18.12■□□□□ 0.49
COL6A1-204ENST00000486023 C2CD4BA6NLJ0 364 aa18.12■□□□□ 0.49
COL6A1-204ENST00000486023 PLK4O00444 970 aa18.12■□□□□ 0.49
COL6A1-204ENST00000486023 BCAT2O15382 392 aaPredicted RBP18.12■□□□□ 0.49
COL6A1-204ENST00000486023 ENDOD1O94919 500 aa18.12■□□□□ 0.49
COL6A1-204ENST00000486023 MT-CO1P00395 513 aa18.12■□□□□ 0.49
COL6A1-204ENST00000486023 ADRA1BP35368 520 aa18.12■□□□□ 0.49
COL6A1-204ENST00000486023 SFSWAPQ12872 951 aaKnown RBP18.12■□□□□ 0.49
COL6A1-204ENST00000486023 C5orf22Q49AR2 442 aa18.12■□□□□ 0.49
COL6A1-204ENST00000486023 C6orf118Q5T5N4 469 aa18.12■□□□□ 0.49
COL6A1-204ENST00000486023 N4BP2L1Q5TBK1 243 aaPredicted RBP18.12■□□□□ 0.49
COL6A1-204ENST00000486023 ACAD10Q6JQN1 1059 aa18.12■□□□□ 0.49
COL6A1-204ENST00000486023 WDR59Q6PJI9 974 aa18.12■□□□□ 0.49
COL6A1-204ENST00000486023 Q6ZVU0 165 aa18.12■□□□□ 0.49
COL6A1-204ENST00000486023 ARCQ7LC44 396 aa18.12■□□□□ 0.49
COL6A1-204ENST00000486023 IRF2BP2Q7Z5L9 587 aa18.12■□□□□ 0.49
COL6A1-204ENST00000486023 DNAAF5Q86Y56 855 aa18.12■□□□□ 0.49
COL6A1-204ENST00000486023 DRC7Q8IY82 874 aa18.12■□□□□ 0.49
COL6A1-204ENST00000486023 ZNF683Q8IZ20 524 aa18.12■□□□□ 0.49
COL6A1-204ENST00000486023 DEFB124Q8NES8 71 aa18.12■□□□□ 0.49
COL6A1-204ENST00000486023 OR7D4Q8NG98 312 aa18.12■□□□□ 0.49
COL6A1-204ENST00000486023 DNASE2BQ8WZ79 361 aa18.12■□□□□ 0.49
COL6A1-204ENST00000486023 SGK2Q9HBY8 427 aa18.12■□□□□ 0.49
COL6A1-204ENST00000486023 TAS2R14Q9NYV8 317 aa18.12■□□□□ 0.49
COL6A1-204ENST00000486023 CBX4O00257 560 aa18.11■□□□□ 0.49
COL6A1-204ENST00000486023 OPHN1O60890 802 aa18.11■□□□□ 0.49
COL6A1-204ENST00000486023 GLDCP23378 1020 aa18.11■□□□□ 0.49
COL6A1-204ENST00000486023 C1QBPQ07021 282 aaKnown RBP18.11■□□□□ 0.49
COL6A1-204ENST00000486023 SFMBT2Q5VUG0 894 aa18.11■□□□□ 0.49
COL6A1-204ENST00000486023 DCUN1D2Q6PH85 259 aa18.11■□□□□ 0.49
COL6A1-204ENST00000486023 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.11■□□□□ 0.49
COL6A1-204ENST00000486023 CCDC185Q8N715 623 aa18.11■□□□□ 0.49
COL6A1-204ENST00000486023 OR14C36Q8NHC7 312 aa18.11■□□□□ 0.49
COL6A1-204ENST00000486023 OR8D1Q8WZ84 308 aa18.11■□□□□ 0.49
COL6A1-204ENST00000486023 BAP1Q92560 729 aa18.11■□□□□ 0.49
COL6A1-204ENST00000486023 BIRC7Q96CA5 298 aa18.11■□□□□ 0.49
COL6A1-204ENST00000486023 MCEEQ96PE7 176 aa18.11■□□□□ 0.49
COL6A1-204ENST00000486023 C2orf49Q9BVC5 232 aaPredicted RBP18.11■□□□□ 0.49
COL6A1-204ENST00000486023 ZYG11BQ9C0D3 744 aa18.11■□□□□ 0.49
COL6A1-204ENST00000486023 HAUS4Q9H6D7 363 aa18.11■□□□□ 0.49
COL6A1-204ENST00000486023 TMEM51Q9NW97 253 aa18.11■□□□□ 0.49
COL6A1-204ENST00000486023 OR12D3Q9UGF7 316 aa18.11■□□□□ 0.49
COL6A1-204ENST00000486023 SCML1Q9UN30 329 aa18.11■□□□□ 0.49
COL6A1-204ENST00000486023 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.11■□□□□ 0.49
COL6A1-204ENST00000486023 OR51B4Q9Y5P0 310 aa18.11■□□□□ 0.49
COL6A1-204ENST00000486023 NUP205Q92621 2012 aa18.11■□□□□ 0.49
COL6A1-204ENST00000486023 ITIH6Q6UXX5 1313 aa18.1■□□□□ 0.49
COL6A1-204ENST00000486023 A0A1B0GTH6 734 aa18.1■□□□□ 0.49
COL6A1-204ENST00000486023 SIGLEC16A6NMB1 481 aa18.1■□□□□ 0.49
COL6A1-204ENST00000486023 GOLGA6L19H0YKK7 550 aa18.1■□□□□ 0.49
COL6A1-204ENST00000486023 K7ERQ8 282 aa18.1■□□□□ 0.49
COL6A1-204ENST00000486023 SKILP12757 684 aa18.1■□□□□ 0.49
COL6A1-204ENST00000486023 RRM1P23921 792 aa18.1■□□□□ 0.49
COL6A1-204ENST00000486023 PTPN9P43378 593 aa18.1■□□□□ 0.49
COL6A1-204ENST00000486023 CSNK1EP49674 416 aaKnown RBP18.1■□□□□ 0.49
COL6A1-204ENST00000486023 METAP1P53582 386 aa18.1■□□□□ 0.49
COL6A1-204ENST00000486023 RPL7AP62424 266 aaKnown RBP18.1■□□□□ 0.49
COL6A1-204ENST00000486023 FANCCQ00597 558 aa18.1■□□□□ 0.49
COL6A1-204ENST00000486023 GRIK2Q13002 908 aa18.1■□□□□ 0.49
COL6A1-204ENST00000486023 ARID5BQ14865 1188 aa18.1■□□□□ 0.49
COL6A1-204ENST00000486023 NR1I3Q14994 352 aa18.1■□□□□ 0.49
COL6A1-204ENST00000486023 NCEH1Q6PIU2 408 aa18.1■□□□□ 0.49
COL6A1-204ENST00000486023 MON1BQ7L1V2 547 aa18.1■□□□□ 0.49
COL6A1-204ENST00000486023 BNIPLQ7Z465 357 aa18.1■□□□□ 0.49
COL6A1-204ENST00000486023 SETD3Q86TU7 594 aaPredicted RBP18.1■□□□□ 0.49
COL6A1-204ENST00000486023 SH2D3CQ8N5H7 860 aa18.1■□□□□ 0.49
COL6A1-204ENST00000486023 AADATQ8N5Z0 425 aa18.1■□□□□ 0.49
COL6A1-204ENST00000486023 C3orf20Q8ND61 904 aa18.1■□□□□ 0.49
COL6A1-204ENST00000486023 FRS2Q8WU20 508 aa18.1■□□□□ 0.49
COL6A1-204ENST00000486023 CPLX3Q8WVH0 158 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms