RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 RABEPKQ7Z6M1 372 aa17.54■□□□□ 0.4
VIM-205ENST00000485947 RHOT1Q8IXI2 618 aa17.54■□□□□ 0.4
VIM-205ENST00000485947 AHI1Q8N157 1196 aa17.54■□□□□ 0.4
VIM-205ENST00000485947 HJURPQ8NCD3 748 aaPredicted RBP17.54■□□□□ 0.4
VIM-205ENST00000485947 P2RY11Q96G91 374 aa17.54■□□□□ 0.4
VIM-205ENST00000485947 PBKQ96KB5 322 aa17.54■□□□□ 0.4
VIM-205ENST00000485947 FCRL2Q96LA5 508 aaPredicted RBP17.54■□□□□ 0.4
VIM-205ENST00000485947 OSBPL9Q96SU4 736 aa17.54■□□□□ 0.4
VIM-205ENST00000485947 ACOX2Q99424 681 aa17.54■□□□□ 0.4
VIM-205ENST00000485947 FBRSQ9HAH7 460 aa17.54■□□□□ 0.4
VIM-205ENST00000485947 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.54■□□□□ 0.4
VIM-205ENST00000485947 SLC12A6Q9UHW9 1150 aa17.54■□□□□ 0.4
VIM-205ENST00000485947 CDC23Q9UJX2 597 aa17.54■□□□□ 0.4
VIM-205ENST00000485947 STAP1Q9ULZ2 295 aa17.54■□□□□ 0.4
VIM-205ENST00000485947 PACSIN2Q9UNF0 486 aaPredicted RBP17.54■□□□□ 0.4
VIM-205ENST00000485947 NAALADL1Q9UQQ1 740 aa17.54■□□□□ 0.4
VIM-205ENST00000485947 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.54■□□□□ 0.4
VIM-205ENST00000485947 PCDHA3Q9Y5H8 950 aa17.54■□□□□ 0.4
VIM-205ENST00000485947 MRFAP1Q9Y605 127 aa17.54■□□□□ 0.4
VIM-205ENST00000485947 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.53■□□□□ 0.4
VIM-205ENST00000485947 DDX3YO15523 660 aaKnown RBP17.53■□□□□ 0.4
VIM-205ENST00000485947 GRAP2O75791 330 aa17.53■□□□□ 0.4
VIM-205ENST00000485947 IGLV3-25P01717 112 aa17.53■□□□□ 0.4
VIM-205ENST00000485947 APOEP02649 317 aa17.53■□□□□ 0.4
VIM-205ENST00000485947 ATP5BP06576 529 aaKnown RBP17.53■□□□□ 0.4
VIM-205ENST00000485947 PCK1P35558 622 aa17.53■□□□□ 0.4
VIM-205ENST00000485947 CREB5Q02930 508 aa17.53■□□□□ 0.4
VIM-205ENST00000485947 TAF5Q15542 800 aa17.53■□□□□ 0.4
VIM-205ENST00000485947 HADHQ16836 314 aaKnown RBP17.53■□□□□ 0.4
VIM-205ENST00000485947 AASDHQ4L235 1098 aaPredicted RBP17.53■□□□□ 0.4
VIM-205ENST00000485947 FAM133BQ5BKY9 247 aaKnown RBP17.53■□□□□ 0.4
VIM-205ENST00000485947 TRNP1Q6NT89 227 aa17.53■□□□□ 0.4
VIM-205ENST00000485947 CYP2U1Q7Z449 544 aa17.53■□□□□ 0.4
VIM-205ENST00000485947 CCDC117Q8IWD4 279 aaPredicted RBP17.53■□□□□ 0.4
VIM-205ENST00000485947 BTN2A3PQ96KV6 586 aa17.53■□□□□ 0.4
VIM-205ENST00000485947 CARD9Q9H257 536 aa17.53■□□□□ 0.4
VIM-205ENST00000485947 L2HGDHQ9H9P8 463 aa17.53■□□□□ 0.4
VIM-205ENST00000485947 CACNA2D2Q9NY47 1150 aa17.53■□□□□ 0.4
VIM-205ENST00000485947 RNF14Q9UBS8 474 aa17.53■□□□□ 0.4
VIM-205ENST00000485947 EVLQ9UI08 416 aaPredicted RBP17.53■□□□□ 0.4
VIM-205ENST00000485947 PLA2G4CQ9UP65 541 aa17.53■□□□□ 0.4
VIM-205ENST00000485947 EML5Q05BV3 1969 aa17.53■□□□□ 0.4
VIM-205ENST00000485947 SYNCRIPO60506 623 aaKnown RBP17.52■□□□□ 0.4
VIM-205ENST00000485947 LRCH4O75427 683 aa17.52■□□□□ 0.4
VIM-205ENST00000485947 TRUB2O95900 331 aaKnown RBP17.52■□□□□ 0.4
VIM-205ENST00000485947 HLA-FP30511 346 aa17.52■□□□□ 0.4
VIM-205ENST00000485947 EIF4EBP2Q13542 120 aaPredicted RBP17.52■□□□□ 0.4
VIM-205ENST00000485947 ST3GAL2Q16842 350 aa17.52■□□□□ 0.4
VIM-205ENST00000485947 WHAMMP3Q1A5X7 153 aa17.52■□□□□ 0.4
VIM-205ENST00000485947 CCDC14Q49A88 953 aa17.52■□□□□ 0.4
VIM-205ENST00000485947 STRADAQ7RTN6 431 aa17.52■□□□□ 0.4
VIM-205ENST00000485947 POLNQ7Z5Q5 900 aa17.52■□□□□ 0.4
VIM-205ENST00000485947 DEFB106AQ8N104 65 aa17.52■□□□□ 0.4
VIM-205ENST00000485947 KDM1BQ8NB78 822 aa17.52■□□□□ 0.4
VIM-205ENST00000485947 FIBINQ8TAL6 211 aa17.52■□□□□ 0.4
VIM-205ENST00000485947 MRGPRX1Q96LB2 322 aa17.52■□□□□ 0.4
VIM-205ENST00000485947 CFAP57Q96MR6 1250 aa17.52■□□□□ 0.4
VIM-205ENST00000485947 ZDHHC4Q9NPG8 344 aa17.52■□□□□ 0.4
VIM-205ENST00000485947 CALCOCO1Q9P1Z2 691 aa17.52■□□□□ 0.4
VIM-205ENST00000485947 GGA2Q9UJY4 613 aa17.52■□□□□ 0.4
VIM-205ENST00000485947 SDK1Q7Z5N4 2213 aa17.51■□□□□ 0.39
VIM-205ENST00000485947 KCNK3O14649 394 aa17.51■□□□□ 0.39
VIM-205ENST00000485947 KHNYNO15037 678 aaKnown RBP17.51■□□□□ 0.39
VIM-205ENST00000485947 PABPC1P11940 636 aaKnown RBP17.51■□□□□ 0.39
VIM-205ENST00000485947 NDUFV2P19404 249 aa17.51■□□□□ 0.39
VIM-205ENST00000485947 BCKDHBP21953 392 aa17.51■□□□□ 0.39
VIM-205ENST00000485947 WASP42768 502 aa17.51■□□□□ 0.39
VIM-205ENST00000485947 PEX5P50542 639 aa17.51■□□□□ 0.39
VIM-205ENST00000485947 RWDD2BP57060 319 aa17.51■□□□□ 0.39
VIM-205ENST00000485947 ZNF234Q14588 700 aa17.51■□□□□ 0.39
VIM-205ENST00000485947 SLC25A52Q3SY17 297 aa17.51■□□□□ 0.39
VIM-205ENST00000485947 ACBD5Q5T8D3 534 aaPredicted RBP17.51■□□□□ 0.39
VIM-205ENST00000485947 SYPL2Q5VXT5 272 aa17.51■□□□□ 0.39
VIM-205ENST00000485947 PEAR1Q5VY43 1037 aaPredicted RBP17.51■□□□□ 0.39
VIM-205ENST00000485947 TAC4Q86UU9 113 aa17.51■□□□□ 0.39
VIM-205ENST00000485947 SYT12Q8IV01 421 aa17.51■□□□□ 0.39
VIM-205ENST00000485947 ATP6V0D2Q8N8Y2 350 aa17.51■□□□□ 0.39
VIM-205ENST00000485947 CEP76Q8TAP6 659 aa17.51■□□□□ 0.39
VIM-205ENST00000485947 CENPIQ92674 756 aaPredicted RBP17.51■□□□□ 0.39
VIM-205ENST00000485947 NT5C3BQ969T7 300 aa17.51■□□□□ 0.39
VIM-205ENST00000485947 CIPCQ9C0C6 399 aa17.51■□□□□ 0.39
VIM-205ENST00000485947 PRDM16Q9HAZ2 1276 aa17.51■□□□□ 0.39
VIM-205ENST00000485947 DDX56Q9NY93 547 aaKnown RBP17.51■□□□□ 0.39
VIM-205ENST00000485947 CLEC4EQ9ULY5 219 aa17.51■□□□□ 0.39
VIM-205ENST00000485947 INVSQ9Y283 1065 aa17.51■□□□□ 0.39
VIM-205ENST00000485947 FAM208BQ5VWN6 2430 aa17.51■□□□□ 0.39
VIM-205ENST00000485947 RALGAPA1Q6GYQ0 2036 aa17.5■□□□□ 0.39
VIM-205ENST00000485947 TSPAN3O60637 253 aa17.5■□□□□ 0.39
VIM-205ENST00000485947 TBL1XO60907 577 aa17.5■□□□□ 0.39
VIM-205ENST00000485947 ENDOD1O94919 500 aa17.5■□□□□ 0.39
VIM-205ENST00000485947 ASLP04424 464 aa17.5■□□□□ 0.39
VIM-205ENST00000485947 KRT7P08729 469 aa17.5■□□□□ 0.39
VIM-205ENST00000485947 DLDP09622 509 aaKnown RBP17.5■□□□□ 0.39
VIM-205ENST00000485947 OXTRP30559 389 aa17.5■□□□□ 0.39
VIM-205ENST00000485947 CCR1P32246 355 aa17.5■□□□□ 0.39
VIM-205ENST00000485947 IL12RB1P42701 662 aa17.5■□□□□ 0.39
VIM-205ENST00000485947 SSR1P43307 286 aaKnown RBP17.5■□□□□ 0.39
VIM-205ENST00000485947 DHPSP49366 369 aaPredicted RBP17.5■□□□□ 0.39
VIM-205ENST00000485947 SULT1E1P49888 294 aa17.5■□□□□ 0.39
VIM-205ENST00000485947 OXCT1P55809 520 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms