RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 RTL3Q8N8U3 475 aaKnown RBP12.15□□□□□ -0.46
HPS4-214ENST00000485842 CCDC112Q8NEF3 446 aa12.15□□□□□ -0.46
HPS4-214ENST00000485842 TEKT4Q8WW24 435 aa12.15□□□□□ -0.46
HPS4-214ENST00000485842 ANP32BQ92688 251 aaKnown RBP12.15□□□□□ -0.46
HPS4-214ENST00000485842 ATOH1Q92858 354 aaPredicted RBP12.15□□□□□ -0.46
HPS4-214ENST00000485842 ALG14Q96F25 216 aa12.15□□□□□ -0.46
HPS4-214ENST00000485842 PSMB7Q99436 277 aa12.15□□□□□ -0.46
HPS4-214ENST00000485842 GABRG3Q99928 467 aa12.15□□□□□ -0.46
HPS4-214ENST00000485842 C2orf49Q9BVC5 232 aaPredicted RBP12.15□□□□□ -0.46
HPS4-214ENST00000485842 TPSD1Q9BZJ3 242 aa12.15□□□□□ -0.46
HPS4-214ENST00000485842 ATP13A1Q9HD20 1204 aa12.15□□□□□ -0.46
HPS4-214ENST00000485842 SLC25A13Q9UJS0 675 aa12.15□□□□□ -0.46
HPS4-214ENST00000485842 OR51B4Q9Y5P0 310 aa12.15□□□□□ -0.46
HPS4-214ENST00000485842 R4GN57 208 aa12.15□□□□□ -0.46
HPS4-214ENST00000485842 CKAP5Q14008 2032 aa12.15□□□□□ -0.47
HPS4-214ENST00000485842 A0A1W2PQF6 199 aa12.14□□□□□ -0.47
HPS4-214ENST00000485842 TTC34A8MYJ7 566 aa12.14□□□□□ -0.47
HPS4-214ENST00000485842 H3BRJ5 948 aa12.14□□□□□ -0.47
HPS4-214ENST00000485842 CBX4O00257 560 aa12.14□□□□□ -0.47
HPS4-214ENST00000485842 BUB1O43683 1085 aa12.14□□□□□ -0.47
HPS4-214ENST00000485842 SPOPO43791 374 aa12.14□□□□□ -0.47
HPS4-214ENST00000485842 SYNCRIPO60506 623 aaKnown RBP12.14□□□□□ -0.47
HPS4-214ENST00000485842 RAMP2O60895 175 aa12.14□□□□□ -0.47
HPS4-214ENST00000485842 ALDH1A2O94788 518 aa12.14□□□□□ -0.47
HPS4-214ENST00000485842 SRPRAP08240 638 aaKnown RBP12.14□□□□□ -0.47
HPS4-214ENST00000485842 TNNT1P13805 278 aa12.14□□□□□ -0.47
HPS4-214ENST00000485842 GLDCP23378 1020 aa12.14□□□□□ -0.47
HPS4-214ENST00000485842 HTR7P34969 479 aa12.14□□□□□ -0.47
HPS4-214ENST00000485842 ACVRL1P37023 503 aa12.14□□□□□ -0.47
HPS4-214ENST00000485842 NRLP54845 237 aa12.14□□□□□ -0.47
HPS4-214ENST00000485842 NAP1L1P55209 391 aaKnown RBP12.14□□□□□ -0.47
HPS4-214ENST00000485842 CDH6P55285 790 aa12.14□□□□□ -0.47
HPS4-214ENST00000485842 ENPP2Q13822 863 aa12.14□□□□□ -0.47
HPS4-214ENST00000485842 TCEAL1Q15170 157 aa12.14□□□□□ -0.47
HPS4-214ENST00000485842 DPYSL2Q16555 572 aa12.14□□□□□ -0.47
HPS4-214ENST00000485842 ZNF528Q3MIS6 628 aa12.14□□□□□ -0.47
HPS4-214ENST00000485842 ATP13A4Q4VNC1 1196 aa12.14□□□□□ -0.47
HPS4-214ENST00000485842 IL31Q6EBC2 164 aa12.14□□□□□ -0.47
HPS4-214ENST00000485842 ZNF783Q6ZMS7 281 aa12.14□□□□□ -0.47
HPS4-214ENST00000485842 CACUL1Q86Y37 369 aa12.14□□□□□ -0.47
HPS4-214ENST00000485842 CAMKK1Q8N5S9 505 aa12.14□□□□□ -0.47
HPS4-214ENST00000485842 DCAF4L2Q8NA75 395 aa12.14□□□□□ -0.47
HPS4-214ENST00000485842 MDGA1Q8NFP4 955 aa12.14□□□□□ -0.47
HPS4-214ENST00000485842 MRGPRX3Q96LB0 322 aa12.14□□□□□ -0.47
HPS4-214ENST00000485842 GOLPH3Q9H4A6 298 aa12.14□□□□□ -0.47
HPS4-214ENST00000485842 MTG2Q9H4K7 406 aa12.14□□□□□ -0.47
HPS4-214ENST00000485842 PCDH18Q9HCL0 1135 aa12.14□□□□□ -0.47
HPS4-214ENST00000485842 ZSCAN32Q9NX65 697 aa12.14□□□□□ -0.47
HPS4-214ENST00000485842 CWC15Q9P013 229 aaKnown RBP12.14□□□□□ -0.47
HPS4-214ENST00000485842 VPS51Q9UID3 782 aa12.14□□□□□ -0.47
HPS4-214ENST00000485842 SLCO3A1Q9UIG8 710 aa12.14□□□□□ -0.47
HPS4-214ENST00000485842 HYOU1Q9Y4L1 999 aa12.14□□□□□ -0.47
HPS4-214ENST00000485842 NYNRINQ9P2P1 1898 aaKnown RBP12.14□□□□□ -0.47
HPS4-214ENST00000485842 A0A0A6YYK5 440 aaPredicted RBP12.13□□□□□ -0.47
HPS4-214ENST00000485842 AXIN1O15169 862 aa12.13□□□□□ -0.47
HPS4-214ENST00000485842 ZBTB24O43167 697 aaPredicted RBP12.13□□□□□ -0.47
HPS4-214ENST00000485842 NRDCO43847 1150 aa12.13□□□□□ -0.47
HPS4-214ENST00000485842 BUB1BO60566 1050 aaPredicted RBP12.13□□□□□ -0.47
HPS4-214ENST00000485842 KRT7P08729 469 aa12.13□□□□□ -0.47
HPS4-214ENST00000485842 ERCC2P18074 760 aa12.13□□□□□ -0.47
HPS4-214ENST00000485842 GABRG2P18507 467 aa12.13□□□□□ -0.47
HPS4-214ENST00000485842 COMTP21964 271 aa12.13□□□□□ -0.47
HPS4-214ENST00000485842 ETFBP38117 255 aa12.13□□□□□ -0.47
HPS4-214ENST00000485842 NNMTP40261 264 aa12.13□□□□□ -0.47
HPS4-214ENST00000485842 ZNF135P52742 658 aaPredicted RBP12.13□□□□□ -0.47
HPS4-214ENST00000485842 HADHBP55084 474 aaKnown RBP12.13□□□□□ -0.47
HPS4-214ENST00000485842 POLD3Q15054 466 aaPredicted RBP12.13□□□□□ -0.47
HPS4-214ENST00000485842 KIAA1324Q6UXG2 1013 aaKnown RBP12.13□□□□□ -0.47
HPS4-214ENST00000485842 LINGO4Q6UY18 593 aa12.13□□□□□ -0.47
HPS4-214ENST00000485842 POLNQ7Z5Q5 900 aa12.13□□□□□ -0.47
HPS4-214ENST00000485842 LONP2Q86WA8 852 aa12.13□□□□□ -0.47
HPS4-214ENST00000485842 LRRC8AQ8IWT6 810 aa12.13□□□□□ -0.47
HPS4-214ENST00000485842 TXLNBQ8N3L3 684 aa12.13□□□□□ -0.47
HPS4-214ENST00000485842 KCTD6Q8NC69 237 aa12.13□□□□□ -0.47
HPS4-214ENST00000485842 ATRIPQ8WXE1 791 aa12.13□□□□□ -0.47
HPS4-214ENST00000485842 ARHGEF2Q92974 986 aaKnown RBP12.13□□□□□ -0.47
HPS4-214ENST00000485842 MYO19Q96H55 970 aa12.13□□□□□ -0.47
HPS4-214ENST00000485842 CELF6Q96J87 481 aaKnown RBP12.13□□□□□ -0.47
HPS4-214ENST00000485842 CALN1Q9BXU9 219 aa12.13□□□□□ -0.47
HPS4-214ENST00000485842 FAM126AQ9BYI3 521 aaPredicted RBP12.13□□□□□ -0.47
HPS4-214ENST00000485842 LACRTQ9GZZ8 138 aa12.13□□□□□ -0.47
HPS4-214ENST00000485842 IRF2BPLQ9H1B7 796 aa12.13□□□□□ -0.47
HPS4-214ENST00000485842 SLC6A17Q9H1V8 727 aa12.13□□□□□ -0.47
HPS4-214ENST00000485842 MAGEH1Q9H213 219 aa12.13□□□□□ -0.47
HPS4-214ENST00000485842 TMEM245Q9H330 911 aa12.13□□□□□ -0.47
HPS4-214ENST00000485842 RETREG1Q9H6L5 497 aa12.13□□□□□ -0.47
HPS4-214ENST00000485842 SALL4Q9UJQ4 1053 aa12.13□□□□□ -0.47
HPS4-214ENST00000485842 PCDHGA2Q9Y5H1 932 aa12.13□□□□□ -0.47
HPS4-214ENST00000485842 DUSP10Q9Y6W6 482 aa12.13□□□□□ -0.47
HPS4-214ENST00000485842 EML5Q05BV3 1969 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 CHD5Q8TDI0 1954 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 CACNA1HO95180 2353 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 FANCMQ8IYD8 2048 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 A0A0U1RQJ8 604 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 MACROD2A1Z1Q3 448 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 LRRD1A4D1F6 860 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 WASH4PA8MWX3 477 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 RASA4BC9J798 803 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 PJA2O43164 708 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 ARHGAP6O43182 974 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms