RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 FSCN3Q9NQT6 498 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 TAS2R14Q9NYV8 317 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 VPS28Q9UK41 221 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 CACNA1EQ15878 2313 aa13.25□□□□□ -0.29
HDAC1-209ENST00000484305 ASCC3Q8N3C0 2202 aaKnown RBP13.25□□□□□ -0.29
HDAC1-209ENST00000484305 METTL12A8MUP2 240 aa13.25□□□□□ -0.29
HDAC1-209ENST00000484305 MEI4A8MW99 385 aa13.25□□□□□ -0.29
HDAC1-209ENST00000484305 TMCO5BA8MYB1 307 aa13.25□□□□□ -0.29
HDAC1-209ENST00000484305 SERPINF2P08697 491 aa13.25□□□□□ -0.29
HDAC1-209ENST00000484305 ADRA1BP35368 520 aa13.25□□□□□ -0.29
HDAC1-209ENST00000484305 NNMTP40261 264 aa13.25□□□□□ -0.29
HDAC1-209ENST00000484305 HDAC4P56524 1084 aa13.25□□□□□ -0.29
HDAC1-209ENST00000484305 RPL7AP62424 266 aaKnown RBP13.25□□□□□ -0.29
HDAC1-209ENST00000484305 FANCCQ00597 558 aa13.25□□□□□ -0.29
HDAC1-209ENST00000484305 WDR45BQ5MNZ6 344 aa13.25□□□□□ -0.29
HDAC1-209ENST00000484305 ACBD5Q5T8D3 534 aaPredicted RBP13.25□□□□□ -0.29
HDAC1-209ENST00000484305 DCAF12L1Q5VU92 463 aa13.25□□□□□ -0.29
HDAC1-209ENST00000484305 SFMBT2Q5VUG0 894 aa13.25□□□□□ -0.29
HDAC1-209ENST00000484305 STRADAQ7RTN6 431 aa13.25□□□□□ -0.29
HDAC1-209ENST00000484305 SETD3Q86TU7 594 aaPredicted RBP13.25□□□□□ -0.29
HDAC1-209ENST00000484305 MMAAQ8IVH4 418 aaKnown RBP13.25□□□□□ -0.29
HDAC1-209ENST00000484305 STK40Q8N2I9 435 aa13.25□□□□□ -0.29
HDAC1-209ENST00000484305 FAM172AQ8WUF8 416 aa13.25□□□□□ -0.29
HDAC1-209ENST00000484305 DNASE2BQ8WZ79 361 aa13.25□□□□□ -0.29
HDAC1-209ENST00000484305 PSMB7Q99436 277 aa13.25□□□□□ -0.29
HDAC1-209ENST00000484305 PABPC3Q9H361 631 aaKnown RBP13.25□□□□□ -0.29
HDAC1-209ENST00000484305 HAUS4Q9H6D7 363 aa13.25□□□□□ -0.29
HDAC1-209ENST00000484305 C6orf106Q9H6K1 298 aaPredicted RBP13.25□□□□□ -0.29
HDAC1-209ENST00000484305 CAPN10Q9HC96 672 aa13.25□□□□□ -0.29
HDAC1-209ENST00000484305 TMEM9BQ9NQ34 198 aa13.25□□□□□ -0.29
HDAC1-209ENST00000484305 AIPL1Q9NZN9 384 aa13.25□□□□□ -0.29
HDAC1-209ENST00000484305 ZNF212Q9UDV6 495 aa13.25□□□□□ -0.29
HDAC1-209ENST00000484305 SLC6A14Q9UN76 642 aa13.25□□□□□ -0.29
HDAC1-209ENST00000484305 CHD5Q8TDI0 1954 aa13.24□□□□□ -0.29
HDAC1-209ENST00000484305 A0A0D9SEW6 157 aa13.24□□□□□ -0.29
HDAC1-209ENST00000484305 FAM72CH0Y354 149 aa13.24□□□□□ -0.29
HDAC1-209ENST00000484305 MID1O15344 667 aa13.24□□□□□ -0.29
HDAC1-209ENST00000484305 SNAP91O60641 907 aa13.24□□□□□ -0.29
HDAC1-209ENST00000484305 RNASEH1O60930 286 aaKnown RBP13.24□□□□□ -0.29
HDAC1-209ENST00000484305 RHOCP08134 193 aa13.24□□□□□ -0.29
HDAC1-209ENST00000484305 ENGP17813 658 aa13.24□□□□□ -0.29
HDAC1-209ENST00000484305 GPD1P21695 349 aa13.24□□□□□ -0.29
HDAC1-209ENST00000484305 RRM1P23921 792 aa13.24□□□□□ -0.29
HDAC1-209ENST00000484305 OR1E1P30953 314 aa13.24□□□□□ -0.29
HDAC1-209ENST00000484305 VASPP50552 380 aaPredicted RBP13.24□□□□□ -0.29
HDAC1-209ENST00000484305 TPM4P67936 248 aa13.24□□□□□ -0.29
HDAC1-209ENST00000484305 GFPT1Q06210 699 aaPredicted RBP13.24□□□□□ -0.29
HDAC1-209ENST00000484305 CST6Q15828 149 aa13.24□□□□□ -0.29
HDAC1-209ENST00000484305 ASIC2Q16515 512 aa13.24□□□□□ -0.29
HDAC1-209ENST00000484305 ARL13BQ3SXY8 428 aa13.24□□□□□ -0.29
HDAC1-209ENST00000484305 TTC31Q49AM3 519 aaPredicted RBP13.24□□□□□ -0.29
HDAC1-209ENST00000484305 PPM1JQ5JR12 505 aa13.24□□□□□ -0.29
HDAC1-209ENST00000484305 PPP1R15BQ5SWA1 713 aa13.24□□□□□ -0.29
HDAC1-209ENST00000484305 FAM72AQ5TYM5 149 aa13.24□□□□□ -0.29
HDAC1-209ENST00000484305 FAM72DQ6L9T8 149 aa13.24□□□□□ -0.29
HDAC1-209ENST00000484305 DNAJC24Q6P3W2 148 aa13.24□□□□□ -0.29
HDAC1-209ENST00000484305 ZNF571Q7Z3V5 609 aaPredicted RBP13.24□□□□□ -0.29
HDAC1-209ENST00000484305 RABEPKQ7Z6M1 372 aa13.24□□□□□ -0.29
HDAC1-209ENST00000484305 FAM72BQ86X60 149 aa13.24□□□□□ -0.29
HDAC1-209ENST00000484305 DNAAF5Q86Y56 855 aa13.24□□□□□ -0.29
HDAC1-209ENST00000484305 CCDC185Q8N715 623 aa13.24□□□□□ -0.29
HDAC1-209ENST00000484305 MCEEQ96PE7 176 aa13.24□□□□□ -0.29
HDAC1-209ENST00000484305 ZYG11BQ9C0D3 744 aa13.24□□□□□ -0.29
HDAC1-209ENST00000484305 BTBD1Q9H0C5 482 aa13.24□□□□□ -0.29
HDAC1-209ENST00000484305 OR12D3Q9UGF7 316 aa13.24□□□□□ -0.29
HDAC1-209ENST00000484305 SERGEFQ9UGK8 458 aa13.24□□□□□ -0.29
HDAC1-209ENST00000484305 EIF2B4Q9UI10 523 aaKnown RBP13.24□□□□□ -0.29
HDAC1-209ENST00000484305 SLC25A13Q9UJS0 675 aa13.24□□□□□ -0.29
HDAC1-209ENST00000484305 A0A1W2PP55 124 aa13.23□□□□□ -0.29
HDAC1-209ENST00000484305 CCP110O43303 1012 aa13.23□□□□□ -0.29
HDAC1-209ENST00000484305 ATP9BO43861 1147 aa13.23□□□□□ -0.29
HDAC1-209ENST00000484305 SEMA4FO95754 770 aa13.23□□□□□ -0.29
HDAC1-209ENST00000484305 MT-CO1P00395 513 aa13.23□□□□□ -0.29
HDAC1-209ENST00000484305 SKILP12757 684 aa13.23□□□□□ -0.29
HDAC1-209ENST00000484305 SLC8A1P32418 973 aa13.23□□□□□ -0.29
HDAC1-209ENST00000484305 PBX1P40424 430 aa13.23□□□□□ -0.29
HDAC1-209ENST00000484305 PRKCIP41743 596 aa13.23□□□□□ -0.29
HDAC1-209ENST00000484305 MAPK8P45983 427 aa13.23□□□□□ -0.29
HDAC1-209ENST00000484305 PSMD8P48556 350 aa13.23□□□□□ -0.29
HDAC1-209ENST00000484305 ZNF143P52747 638 aaPredicted RBP13.23□□□□□ -0.29
HDAC1-209ENST00000484305 UBASH3AP57075 661 aa13.23□□□□□ -0.29
HDAC1-209ENST00000484305 KRT83P78385 493 aa13.23□□□□□ -0.29
HDAC1-209ENST00000484305 ELAVL3Q14576 367 aaKnown RBP13.23□□□□□ -0.29
HDAC1-209ENST00000484305 DLG2Q15700 870 aa13.23□□□□□ -0.29
HDAC1-209ENST00000484305 SKOR2Q2VWA4 1001 aaPredicted RBP13.23□□□□□ -0.29
HDAC1-209ENST00000484305 ACCSLQ4AC99 568 aa13.23□□□□□ -0.29
HDAC1-209ENST00000484305 MANEALQ5VSG8 457 aa13.23□□□□□ -0.29
HDAC1-209ENST00000484305 USP30Q70CQ3 517 aa13.23□□□□□ -0.29
HDAC1-209ENST00000484305 ZCCHC9Q8N567 271 aaKnown RBP13.23□□□□□ -0.29
HDAC1-209ENST00000484305 SH2D3CQ8N5H7 860 aa13.23□□□□□ -0.29
HDAC1-209ENST00000484305 OR7D4Q8NG98 312 aa13.23□□□□□ -0.29
HDAC1-209ENST00000484305 GANCQ8TET4 914 aa13.23□□□□□ -0.29
HDAC1-209ENST00000484305 VCPIP1Q96JH7 1222 aa13.23□□□□□ -0.29
HDAC1-209ENST00000484305 EDEM3Q9BZQ6 932 aa13.23□□□□□ -0.29
HDAC1-209ENST00000484305 MIR1-1HGQ9H1L0 117 aa13.23□□□□□ -0.29
HDAC1-209ENST00000484305 OSBPL2Q9H1P3 480 aa13.23□□□□□ -0.29
HDAC1-209ENST00000484305 PCED1AQ9H1Q7 454 aa13.23□□□□□ -0.29
HDAC1-209ENST00000484305 NEUROG2Q9H2A3 272 aa13.23□□□□□ -0.29
HDAC1-209ENST00000484305 FBXL12Q9NXK8 326 aa13.23□□□□□ -0.29
HDAC1-209ENST00000484305 PPARGC1AQ9UBK2 798 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms