RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 LCHNA4D1U4 455 aa14.36□□□□□ -0.11
CLK3-204ENST00000483723 PSMD3O43242 534 aa14.36□□□□□ -0.11
CLK3-204ENST00000483723 OLFM2O95897 454 aa14.36□□□□□ -0.11
CLK3-204ENST00000483723 PEX11BO96011 259 aa14.36□□□□□ -0.11
CLK3-204ENST00000483723 KLKB1P03952 638 aa14.36□□□□□ -0.11
CLK3-204ENST00000483723 MDH1P40925 334 aaKnown RBP14.36□□□□□ -0.11
CLK3-204ENST00000483723 MAPKAPK2P49137 400 aa14.36□□□□□ -0.11
CLK3-204ENST00000483723 LMAN1P49257 510 aa14.36□□□□□ -0.11
CLK3-204ENST00000483723 HARS2P49590 506 aaKnown RBP14.36□□□□□ -0.11
CLK3-204ENST00000483723 ATP1A2P50993 1020 aa14.36□□□□□ -0.11
CLK3-204ENST00000483723 YBEYP58557 167 aaPredicted RBP14.36□□□□□ -0.11
CLK3-204ENST00000483723 TNK2Q07912 1038 aa14.36□□□□□ -0.11
CLK3-204ENST00000483723 MTM1Q13496 603 aa14.36□□□□□ -0.11
CLK3-204ENST00000483723 KLHL38Q2WGJ6 581 aa14.36□□□□□ -0.11
CLK3-204ENST00000483723 PABPC1LQ4VXU2 614 aaKnown RBP14.36□□□□□ -0.11
CLK3-204ENST00000483723 FAM133BQ5BKY9 247 aaKnown RBP14.36□□□□□ -0.11
CLK3-204ENST00000483723 CHSY1Q86X52 802 aa14.36□□□□□ -0.11
CLK3-204ENST00000483723 SPPL3Q8TCT6 385 aa14.36□□□□□ -0.11
CLK3-204ENST00000483723 ARHGEF2Q92974 986 aaKnown RBP14.36□□□□□ -0.11
CLK3-204ENST00000483723 MYEOVQ96EZ4 313 aa14.36□□□□□ -0.11
CLK3-204ENST00000483723 AGAP3Q96P47 875 aa14.36□□□□□ -0.11
CLK3-204ENST00000483723 FCRL5Q96RD9 977 aa14.36□□□□□ -0.11
CLK3-204ENST00000483723 MLPHQ9BV36 600 aaPredicted RBP14.36□□□□□ -0.11
CLK3-204ENST00000483723 CAPS2Q9BXY5 557 aa14.36□□□□□ -0.11
CLK3-204ENST00000483723 CNOT10Q9H9A5 744 aaKnown RBP14.36□□□□□ -0.11
CLK3-204ENST00000483723 CTNNAL1Q9UBT7 734 aa14.36□□□□□ -0.11
CLK3-204ENST00000483723 RSPH14Q9UHP6 348 aa14.36□□□□□ -0.11
CLK3-204ENST00000483723 IPO11Q9UI26 975 aaKnown RBP14.36□□□□□ -0.11
CLK3-204ENST00000483723 ACTL7BQ9Y614 415 aa14.36□□□□□ -0.11
CLK3-204ENST00000483723 TCRBV9S1A1TA0A576 114 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 C2orf78A6NCI8 922 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 ARHGAP42A6NI28 874 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 SDR42E2A6NKP2 422 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 RASA4BC9J798 803 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 RASA4O43374 803 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 TLL1O43897 1013 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 C1RP00736 705 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 ADH1AP07327 375 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 NFKB1P19838 968 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 SLC6A4P31645 630 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 HPDP32754 393 aaPredicted RBP14.35□□□□□ -0.11
CLK3-204ENST00000483723 SLC11A2P49281 568 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 GEMIN4P57678 1058 aaKnown RBP14.35□□□□□ -0.11
CLK3-204ENST00000483723 ERVFC1P60507 584 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 NR1H3Q13133 447 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 SKIDA1Q1XH10 827 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 STEAP4Q687X5 459 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 ADGRD1Q6QNK2 874 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 CCDC149Q6ZUS6 474 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 TMC7Q7Z402 723 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 MPP5Q8N3R9 675 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 MRPL43Q8N983 215 aaKnown RBP14.35□□□□□ -0.11
CLK3-204ENST00000483723 ARNTL2Q8WYA1 636 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 XPO6Q96QU8 1125 aaKnown RBP14.35□□□□□ -0.11
CLK3-204ENST00000483723 CASS4Q9NQ75 786 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 GKN1Q9NS71 199 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 ZC3H7BQ9UGR2 993 aaKnown RBP14.35□□□□□ -0.11
CLK3-204ENST00000483723 STOML2Q9UJZ1 356 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 C5orf67F2Z3F1 127 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 F5H5T6 163 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 POC1B-GALNT4F8VUJ3 575 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 LATS1O95835 1130 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 SPATA31D3P0C874 917 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 PRKCHP24723 683 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 UBE3AQ05086 875 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 HNRNPDQ14103 355 aaKnown RBP14.35□□□□□ -0.11
CLK3-204ENST00000483723 ANO4Q32M45 955 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 CAPN12Q6ZSI9 719 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 SPATA31D4Q6ZUB0 917 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 TAOK1Q7L7X3 1001 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 CCNJLQ8IV13 435 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 LGI2Q8N0V4 545 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 TEX26Q8N6G2 289 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 CENPTQ96BT3 561 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 HMCESQ96FZ2 354 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 ZNF419Q96HQ0 510 aaPredicted RBP14.35□□□□□ -0.11
CLK3-204ENST00000483723 ZFRQ96KR1 1074 aaKnown RBP14.35□□□□□ -0.11
CLK3-204ENST00000483723 RPRD1AQ96P16 312 aaPredicted RBP14.35□□□□□ -0.11
CLK3-204ENST00000483723 CYTH2Q99418 400 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 NACA2Q9H009 215 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 GLOD4Q9HC38 313 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 RWDD3Q9Y3V2 267 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 TTLL3Q9Y4R7 772 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 PCDHA11Q9Y5I1 949 aa14.35□□□□□ -0.11
CLK3-204ENST00000483723 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.34□□□□□ -0.11
CLK3-204ENST00000483723 C2orf71A6NGG8 1288 aa14.34□□□□□ -0.11
CLK3-204ENST00000483723 SRRM3A6NNA2 597 aaPredicted RBP14.34□□□□□ -0.11
CLK3-204ENST00000483723 H3BNC9 293 aa14.34□□□□□ -0.11
CLK3-204ENST00000483723 PRPSAP1Q14558 356 aa14.34□□□□□ -0.11
CLK3-204ENST00000483723 PARP15Q460N3 678 aa14.34□□□□□ -0.11
CLK3-204ENST00000483723 UNC5AQ6ZN44 842 aa14.34□□□□□ -0.11
CLK3-204ENST00000483723 RTL10Q7L3V2 364 aa14.34□□□□□ -0.11
CLK3-204ENST00000483723 TFAP2DQ7Z6R9 452 aa14.34□□□□□ -0.11
CLK3-204ENST00000483723 TMC8Q8IU68 726 aa14.34□□□□□ -0.11
CLK3-204ENST00000483723 KREMEN2Q8NCW0 462 aa14.34□□□□□ -0.11
CLK3-204ENST00000483723 WBP2Q969T9 261 aa14.34□□□□□ -0.11
CLK3-204ENST00000483723 PPP1R2P1Q96PQ5 205 aa14.34□□□□□ -0.11
CLK3-204ENST00000483723 NAT9Q9BTE0 207 aa14.34□□□□□ -0.11
CLK3-204ENST00000483723 EMILIN2Q9BXX0 1053 aa14.34□□□□□ -0.11
CLK3-204ENST00000483723 MOCS1Q9NZB8 636 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms