RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 HLA-EP13747 358 aa17.01■□□□□ 0.31
HMGN1-214ENST00000482733 NDUFV2P19404 249 aa17.01■□□□□ 0.31
HMGN1-214ENST00000482733 MAGEA1P43355 309 aa17.01■□□□□ 0.31
HMGN1-214ENST00000482733 TPI1P60174 286 aa17.01■□□□□ 0.31
HMGN1-214ENST00000482733 GNA12Q03113 381 aa17.01■□□□□ 0.31
HMGN1-214ENST00000482733 HADHQ16836 314 aaKnown RBP17.01■□□□□ 0.31
HMGN1-214ENST00000482733 METTL3Q86U44 580 aaKnown RBP17.01■□□□□ 0.31
HMGN1-214ENST00000482733 RTL3Q8N8U3 475 aaKnown RBP17.01■□□□□ 0.31
HMGN1-214ENST00000482733 TEKT4Q8WW24 435 aa17.01■□□□□ 0.31
HMGN1-214ENST00000482733 BTBD6Q96KE9 485 aa17.01■□□□□ 0.31
HMGN1-214ENST00000482733 MRGPRX1Q96LB2 322 aa17.01■□□□□ 0.31
HMGN1-214ENST00000482733 MAGEH1Q9H213 219 aa17.01■□□□□ 0.31
HMGN1-214ENST00000482733 PRDM16Q9HAZ2 1276 aa17.01■□□□□ 0.31
HMGN1-214ENST00000482733 ATG2BQ96BY7 2078 aa17■□□□□ 0.31
HMGN1-214ENST00000482733 A0A0D9SEW6 157 aa17■□□□□ 0.31
HMGN1-214ENST00000482733 EDDM13A0A1B0GTR0 161 aa17■□□□□ 0.31
HMGN1-214ENST00000482733 EEF2KO00418 725 aaKnown RBP17■□□□□ 0.31
HMGN1-214ENST00000482733 RAMP2O60895 175 aa17■□□□□ 0.31
HMGN1-214ENST00000482733 MTA2O94776 668 aa17■□□□□ 0.31
HMGN1-214ENST00000482733 IPO7O95373 1038 aaKnown RBP17■□□□□ 0.31
HMGN1-214ENST00000482733 C7P10643 843 aa17■□□□□ 0.31
HMGN1-214ENST00000482733 MAN1A1P33908 653 aa17■□□□□ 0.31
HMGN1-214ENST00000482733 ARHGAP25P42331 645 aa17■□□□□ 0.31
HMGN1-214ENST00000482733 SLC20A2Q08357 652 aa17■□□□□ 0.31
HMGN1-214ENST00000482733 SRSF5Q13243 272 aaKnown RBP17■□□□□ 0.31
HMGN1-214ENST00000482733 TCEAL1Q15170 157 aa17■□□□□ 0.31
HMGN1-214ENST00000482733 RETSATQ6NUM9 610 aa17■□□□□ 0.31
HMGN1-214ENST00000482733 PRR23BQ6ZRT6 265 aa17■□□□□ 0.31
HMGN1-214ENST00000482733 CYP4V2Q6ZWL3 525 aaPredicted RBP17■□□□□ 0.31
HMGN1-214ENST00000482733 TMPRSS6Q8IU80 811 aa17■□□□□ 0.31
HMGN1-214ENST00000482733 SUMF1Q8NBK3 374 aa17■□□□□ 0.31
HMGN1-214ENST00000482733 SLC35G2Q8TBE7 412 aa17■□□□□ 0.31
HMGN1-214ENST00000482733 RFFLQ8WZ73 363 aa17■□□□□ 0.31
HMGN1-214ENST00000482733 PRCCQ92733 491 aaPredicted RBP17■□□□□ 0.31
HMGN1-214ENST00000482733 SIPA1Q96FS4 1042 aa17■□□□□ 0.31
HMGN1-214ENST00000482733 RPL10LQ96L21 214 aaKnown RBP17■□□□□ 0.31
HMGN1-214ENST00000482733 PSMB7Q99436 277 aa17■□□□□ 0.31
HMGN1-214ENST00000482733 SPON2Q9BUD6 331 aa17■□□□□ 0.31
HMGN1-214ENST00000482733 ATP13A1Q9HD20 1204 aa17■□□□□ 0.31
HMGN1-214ENST00000482733 PRSS16Q9NQE7 514 aa17■□□□□ 0.31
HMGN1-214ENST00000482733 GPATCH2LQ9NWQ4 482 aa17■□□□□ 0.31
HMGN1-214ENST00000482733 DNAI1Q9UI46 699 aa17■□□□□ 0.31
HMGN1-214ENST00000482733 VPS51Q9UID3 782 aa17■□□□□ 0.31
HMGN1-214ENST00000482733 SLCO3A1Q9UIG8 710 aa17■□□□□ 0.31
HMGN1-214ENST00000482733 SMG5Q9UPR3 1016 aaKnown RBP17■□□□□ 0.31
HMGN1-214ENST00000482733 HS3ST2Q9Y278 367 aa17■□□□□ 0.31
HMGN1-214ENST00000482733 EPN1Q9Y6I3 576 aaPredicted RBP17■□□□□ 0.31
HMGN1-214ENST00000482733 PRR23AA6NEV1 266 aa16.99■□□□□ 0.31
HMGN1-214ENST00000482733 DAPK3O43293 454 aa16.99■□□□□ 0.31
HMGN1-214ENST00000482733 ATP9BO43861 1147 aa16.99■□□□□ 0.31
HMGN1-214ENST00000482733 IL1R2P27930 398 aa16.99■□□□□ 0.31
HMGN1-214ENST00000482733 P2RY2P41231 377 aa16.99■□□□□ 0.31
HMGN1-214ENST00000482733 SSR1P43307 286 aaKnown RBP16.99■□□□□ 0.31
HMGN1-214ENST00000482733 HCAR3P49019 387 aa16.99■□□□□ 0.31
HMGN1-214ENST00000482733 CLCN6P51797 869 aa16.99■□□□□ 0.31
HMGN1-214ENST00000482733 COPAP53621 1224 aa16.99■□□□□ 0.31
HMGN1-214ENST00000482733 YBEYP58557 167 aaPredicted RBP16.99■□□□□ 0.31
HMGN1-214ENST00000482733 SLC25A11Q02978 314 aaKnown RBP16.99■□□□□ 0.31
HMGN1-214ENST00000482733 ZBTB16Q05516 673 aa16.99■□□□□ 0.31
HMGN1-214ENST00000482733 DPYSL2Q16555 572 aa16.99■□□□□ 0.31
HMGN1-214ENST00000482733 CA9Q16790 459 aa16.99■□□□□ 0.31
HMGN1-214ENST00000482733 MAP7D1Q3KQU3 841 aa16.99■□□□□ 0.31
HMGN1-214ENST00000482733 IL31Q6EBC2 164 aa16.99■□□□□ 0.31
HMGN1-214ENST00000482733 KIAA1324Q6UXG2 1013 aaKnown RBP16.99■□□□□ 0.31
HMGN1-214ENST00000482733 ZNF366Q8N895 744 aa16.99■□□□□ 0.31
HMGN1-214ENST00000482733 SPC24Q8NBT2 197 aa16.99■□□□□ 0.31
HMGN1-214ENST00000482733 OR7D4Q8NG98 312 aa16.99■□□□□ 0.31
HMGN1-214ENST00000482733 ZC3H10Q96K80 434 aaKnown RBP16.99■□□□□ 0.31
HMGN1-214ENST00000482733 KCTD15Q96SI1 283 aaPredicted RBP16.99■□□□□ 0.31
HMGN1-214ENST00000482733 BAG1Q99933 345 aaPredicted RBP16.99■□□□□ 0.31
HMGN1-214ENST00000482733 ACE2Q9BYF1 805 aaPredicted RBP16.99■□□□□ 0.31
HMGN1-214ENST00000482733 MKRN2Q9H000 416 aaKnown RBP16.99■□□□□ 0.31
HMGN1-214ENST00000482733 ZWILCHQ9H900 591 aa16.99■□□□□ 0.31
HMGN1-214ENST00000482733 OSGEPQ9NPF4 335 aa16.99■□□□□ 0.31
HMGN1-214ENST00000482733 HPCAL4Q9UM19 191 aa16.99■□□□□ 0.31
HMGN1-214ENST00000482733 PCDHA13Q9Y5I0 950 aa16.99■□□□□ 0.31
HMGN1-214ENST00000482733 MYO15AQ9UKN7 3530 aa16.98■□□□□ 0.31
HMGN1-214ENST00000482733 TTC34A8MYJ7 566 aa16.98■□□□□ 0.31
HMGN1-214ENST00000482733 H3BRJ5 948 aa16.98■□□□□ 0.31
HMGN1-214ENST00000482733 CBX4O00257 560 aa16.98■□□□□ 0.31
HMGN1-214ENST00000482733 SNAP91O60641 907 aa16.98■□□□□ 0.31
HMGN1-214ENST00000482733 RNASEH1O60930 286 aaKnown RBP16.98■□□□□ 0.31
HMGN1-214ENST00000482733 RHOBTB1O94844 696 aa16.98■□□□□ 0.31
HMGN1-214ENST00000482733 NDUFA10O95299 355 aa16.98■□□□□ 0.31
HMGN1-214ENST00000482733 RARAP10276 462 aa16.98■□□□□ 0.31
HMGN1-214ENST00000482733 ACADMP11310 421 aa16.98■□□□□ 0.31
HMGN1-214ENST00000482733 ARL4AP40617 200 aa16.98■□□□□ 0.31
HMGN1-214ENST00000482733 STK19P49842 368 aaPredicted RBP16.98■□□□□ 0.31
HMGN1-214ENST00000482733 GEMIN4P57678 1058 aaKnown RBP16.98■□□□□ 0.31
HMGN1-214ENST00000482733 SFSWAPQ12872 951 aaKnown RBP16.98■□□□□ 0.31
HMGN1-214ENST00000482733 POLD3Q15054 466 aaPredicted RBP16.98■□□□□ 0.31
HMGN1-214ENST00000482733 ELF2Q15723 593 aa16.98■□□□□ 0.31
HMGN1-214ENST00000482733 PPP6R3Q5H9R7 873 aaPredicted RBP16.98■□□□□ 0.31
HMGN1-214ENST00000482733 KCNT1Q5JUK3 1230 aa16.98■□□□□ 0.31
HMGN1-214ENST00000482733 C9orf64Q5T6V5 341 aa16.98■□□□□ 0.31
HMGN1-214ENST00000482733 DAB2IPQ5VWQ8 1189 aa16.98■□□□□ 0.31
HMGN1-214ENST00000482733 LAIR1Q6GTX8 287 aa16.98■□□□□ 0.31
HMGN1-214ENST00000482733 SLC36A4Q6YBV0 504 aa16.98■□□□□ 0.31
HMGN1-214ENST00000482733 RFX8Q6ZV50 586 aa16.98■□□□□ 0.31
HMGN1-214ENST00000482733 UMODL1-AS1Q8N2C9 162 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms