RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, human

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC1-208	ENST00000482310	PRR33	A8MZF0	331 aa		13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	RASA4B	C9J798	803 aa		13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	CBX4	O00257	560 aa		13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	MAN2B1	O00754	1011 aa		13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	RASA4	O43374	803 aa		13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	SNAP91	O60641	907 aa		13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	CST8	O60676	142 aa		13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	POLR2E	P19388	210 aa	Known RBP	13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	TIE1	P35590	1138 aa		13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	EIF2D	P41214	584 aa	Known RBP	13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	GRIA2	P42262	883 aa		13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	WAS	P42768	502 aa		13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	HCAR3	P49019	387 aa		13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	ZNF135	P52742	658 aa	Predicted RBP	13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	GNA12	Q03113	381 aa		13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	ADCY2	Q08462	1091 aa		13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	SIGLEC14	Q08ET2	396 aa		13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	POLD3	Q15054	466 aa	Predicted RBP	13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	PLEKHG6	Q3KR16	790 aa		13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	C2orf27A	Q580R0	203 aa		13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	TFDP3	Q5H9I0	405 aa		13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	EMC10	Q5UCC4	262 aa		13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	TMEM215	Q68D42	235 aa		13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	MBLAC2	Q68D91	279 aa		13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	LINGO4	Q6UY18	593 aa		13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	SETD3	Q86TU7	594 aa	Predicted RBP	13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	ALYREF	Q86V81	257 aa	Known RBP	13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	AHI1	Q8N157	1196 aa		13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	EZH1	Q92800	747 aa	Predicted RBP	13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	SHD	Q96IW2	340 aa		13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	FAM118B	Q9BPY3	351 aa		13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	HERPUD2	Q9BSE4	406 aa		13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	SLC2A11	Q9BYW1	496 aa		13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	SLC39A8	Q9C0K1	460 aa		13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	NOL6	Q9H6R4	1146 aa	Known RBP	13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	LTB4R2	Q9NPC1	389 aa		13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	RCOR3	Q9P2K3	495 aa	Predicted RBP	13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	INTS6	Q9UL03	887 aa	Known RBP	13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	ACTL7A	Q9Y615	435 aa		13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	CKAP5	Q14008	2032 aa		13.56	□□□□□ -0.24
HDAC1-208	ENST00000482310	ZNF318	Q5VUA4	2279 aa		13.55	□□□□□ -0.24
HDAC1-208	ENST00000482310	KANSL1L	A0AUZ9	987 aa		13.55	□□□□□ -0.24
HDAC1-208	ENST00000482310	ILVBL	A1L0T0	632 aa		13.55	□□□□□ -0.24
HDAC1-208	ENST00000482310	FAM170B	A6NMN3	283 aa		13.55	□□□□□ -0.24
HDAC1-208	ENST00000482310	CEP104	O60308	925 aa		13.55	□□□□□ -0.24
HDAC1-208	ENST00000482310	ALAD	P13716	330 aa		13.55	□□□□□ -0.24
HDAC1-208	ENST00000482310	GLUL	P15104	373 aa		13.55	□□□□□ -0.24
HDAC1-208	ENST00000482310	CETN2	P41208	172 aa		13.55	□□□□□ -0.24
HDAC1-208	ENST00000482310	STK19	P49842	368 aa	Predicted RBP	13.55	□□□□□ -0.24
HDAC1-208	ENST00000482310	GBE1	Q04446	702 aa		13.55	□□□□□ -0.24
HDAC1-208	ENST00000482310	TMEM196	Q5HYL7	178 aa		13.55	□□□□□ -0.24
HDAC1-208	ENST00000482310	RNF43	Q68DV7	783 aa		13.55	□□□□□ -0.24
HDAC1-208	ENST00000482310	SYT10	Q6XYQ8	523 aa		13.55	□□□□□ -0.24
HDAC1-208	ENST00000482310	ARHGAP36	Q6ZRI8	547 aa		13.55	□□□□□ -0.24
HDAC1-208	ENST00000482310	TRIM67	Q6ZTA4	783 aa		13.55	□□□□□ -0.24
HDAC1-208	ENST00000482310	ADIPOR2	Q86V24	386 aa		13.55	□□□□□ -0.24
HDAC1-208	ENST00000482310	PLD5	Q8N7P1	536 aa		13.55	□□□□□ -0.24
HDAC1-208	ENST00000482310	ARHGEF2	Q92974	986 aa	Known RBP	13.55	□□□□□ -0.24
HDAC1-208	ENST00000482310	EXOC4	Q96A65	974 aa		13.55	□□□□□ -0.24
HDAC1-208	ENST00000482310	FAF2	Q96CS3	445 aa		13.55	□□□□□ -0.24
HDAC1-208	ENST00000482310	MSANTD3	Q96H12	275 aa		13.55	□□□□□ -0.24
HDAC1-208	ENST00000482310	LMLN	Q96KR4	655 aa		13.55	□□□□□ -0.24
HDAC1-208	ENST00000482310	RPL10L	Q96L21	214 aa	Known RBP	13.55	□□□□□ -0.24
HDAC1-208	ENST00000482310	FEM1A	Q9BSK4	669 aa		13.55	□□□□□ -0.24
HDAC1-208	ENST00000482310	OSBPL8	Q9BZF1	889 aa		13.55	□□□□□ -0.24
HDAC1-208	ENST00000482310	KLC2	Q9H0B6	622 aa		13.55	□□□□□ -0.24
HDAC1-208	ENST00000482310	KCND1	Q9NSA2	647 aa		13.55	□□□□□ -0.24
HDAC1-208	ENST00000482310	SAE1	Q9UBE0	346 aa	Predicted RBP	13.55	□□□□□ -0.24
HDAC1-208	ENST00000482310	FBXO10	Q9UK96	956 aa		13.55	□□□□□ -0.24
HDAC1-208	ENST00000482310	TBC1D30	Q9Y2I9	924 aa		13.55	□□□□□ -0.24
HDAC1-208	ENST00000482310	JRKL	Q9Y4A0	524 aa		13.55	□□□□□ -0.24
HDAC1-208	ENST00000482310	PIEZO1	Q92508	2521 aa		13.55	□□□□□ -0.24
HDAC1-208	ENST00000482310	TMEM221	A6NGB7	291 aa		13.54	□□□□□ -0.24
HDAC1-208	ENST00000482310	ARHGAP42	A6NI28	874 aa		13.54	□□□□□ -0.24
HDAC1-208	ENST00000482310	WASH4P	A8MWX3	477 aa		13.54	□□□□□ -0.24
HDAC1-208	ENST00000482310		K7EQS6	105 aa		13.54	□□□□□ -0.24
HDAC1-208	ENST00000482310		M0R296	226 aa		13.54	□□□□□ -0.24
HDAC1-208	ENST00000482310	RNF40	O75150	1001 aa		13.54	□□□□□ -0.24
HDAC1-208	ENST00000482310	DCN	P07585	359 aa	Known RBP	13.54	□□□□□ -0.24
HDAC1-208	ENST00000482310	PECAM1	P16284	738 aa	Predicted RBP	13.54	□□□□□ -0.24
HDAC1-208	ENST00000482310	SERPINB6	P35237	376 aa		13.54	□□□□□ -0.24
HDAC1-208	ENST00000482310	PAPOLA	P51003	745 aa	Known RBP	13.54	□□□□□ -0.24
HDAC1-208	ENST00000482310	OXCT1	P55809	520 aa		13.54	□□□□□ -0.24
HDAC1-208	ENST00000482310	STARD6	P59095	220 aa		13.54	□□□□□ -0.24
HDAC1-208	ENST00000482310	PPP2R5E	Q16537	467 aa		13.54	□□□□□ -0.24
HDAC1-208	ENST00000482310	PREPL	Q4J6C6	727 aa	Predicted RBP	13.54	□□□□□ -0.24
HDAC1-208	ENST00000482310	FNDC3B	Q53EP0	1204 aa	Known RBP	13.54	□□□□□ -0.24
HDAC1-208	ENST00000482310	FAM182A	Q5T1J6	154 aa		13.54	□□□□□ -0.24
HDAC1-208	ENST00000482310	EGFLAM	Q63HQ2	1017 aa		13.54	□□□□□ -0.24
HDAC1-208	ENST00000482310		Q6ZS52	159 aa		13.54	□□□□□ -0.24
HDAC1-208	ENST00000482310	ARHGAP12	Q8IWW6	846 aa		13.54	□□□□□ -0.24
HDAC1-208	ENST00000482310	ATPAF2	Q8N5M1	289 aa		13.54	□□□□□ -0.24
HDAC1-208	ENST00000482310	ZNF366	Q8N895	744 aa		13.54	□□□□□ -0.24
HDAC1-208	ENST00000482310	ZNF557	Q8N988	423 aa	Predicted RBP	13.54	□□□□□ -0.24
HDAC1-208	ENST00000482310	WFIKKN2	Q8TEU8	576 aa		13.54	□□□□□ -0.24
HDAC1-208	ENST00000482310	ZNF592	Q92610	1267 aa		13.54	□□□□□ -0.24
HDAC1-208	ENST00000482310	NAPG	Q99747	312 aa	Predicted RBP	13.54	□□□□□ -0.24
HDAC1-208	ENST00000482310	LMAN1L	Q9HAT1	526 aa		13.54	□□□□□ -0.24
HDAC1-208	ENST00000482310	SP110	Q9HB58	689 aa		13.54	□□□□□ -0.24
HDAC1-208	ENST00000482310	SMARCAL1	Q9NZC9	954 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms