RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 VCPIP1Q96JH7 1222 aa12.21□□□□□ -0.45
HMGN1-213ENST00000482192 MCEEQ96PE7 176 aa12.21□□□□□ -0.45
HMGN1-213ENST00000482192 C2orf49Q9BVC5 232 aaPredicted RBP12.21□□□□□ -0.45
HMGN1-213ENST00000482192 TTYH3Q9C0H2 523 aa12.21□□□□□ -0.45
HMGN1-213ENST00000482192 BTBD1Q9H0C5 482 aa12.21□□□□□ -0.45
HMGN1-213ENST00000482192 PABPC3Q9H361 631 aaKnown RBP12.21□□□□□ -0.45
HMGN1-213ENST00000482192 MPP6Q9NZW5 540 aa12.21□□□□□ -0.45
HMGN1-213ENST00000482192 PPARGC1AQ9UBK2 798 aaKnown RBP12.21□□□□□ -0.45
HMGN1-213ENST00000482192 NCKAP1Q9Y2A7 1128 aa12.21□□□□□ -0.45
HMGN1-213ENST00000482192 TNRC6BQ9UPQ9 1833 aaKnown RBP12.21□□□□□ -0.46
HMGN1-213ENST00000482192 THADAQ6YHU6 1953 aa12.2□□□□□ -0.46
HMGN1-213ENST00000482192 TCRBV5S1A1TA0A578 114 aa12.2□□□□□ -0.46
HMGN1-213ENST00000482192 C4orf47A7E2U8 309 aa12.2□□□□□ -0.46
HMGN1-213ENST00000482192 ATP9BO43861 1147 aa12.2□□□□□ -0.46
HMGN1-213ENST00000482192 SEMA4FO95754 770 aa12.2□□□□□ -0.46
HMGN1-213ENST00000482192 DESP17661 470 aa12.2□□□□□ -0.46
HMGN1-213ENST00000482192 ENGP17813 658 aa12.2□□□□□ -0.46
HMGN1-213ENST00000482192 RRM1P23921 792 aa12.2□□□□□ -0.46
HMGN1-213ENST00000482192 ACSL1P33121 698 aa12.2□□□□□ -0.46
HMGN1-213ENST00000482192 PRKCIP41743 596 aa12.2□□□□□ -0.46
HMGN1-213ENST00000482192 ZNF143P52747 638 aaPredicted RBP12.2□□□□□ -0.46
HMGN1-213ENST00000482192 HDAC4P56524 1084 aa12.2□□□□□ -0.46
HMGN1-213ENST00000482192 UBASH3AP57075 661 aa12.2□□□□□ -0.46
HMGN1-213ENST00000482192 NRG1Q02297 640 aaPredicted RBP12.2□□□□□ -0.46
HMGN1-213ENST00000482192 RAB6CQ53S08 254 aa12.2□□□□□ -0.46
HMGN1-213ENST00000482192 PPP1R15BQ5SWA1 713 aa12.2□□□□□ -0.46
HMGN1-213ENST00000482192 DCAF12L1Q5VU92 463 aa12.2□□□□□ -0.46
HMGN1-213ENST00000482192 DAB2IPQ5VWQ8 1189 aa12.2□□□□□ -0.46
HMGN1-213ENST00000482192 WDR59Q6PJI9 974 aa12.2□□□□□ -0.46
HMGN1-213ENST00000482192 ZNF783Q6ZMS7 281 aa12.2□□□□□ -0.46
HMGN1-213ENST00000482192 MMAAQ8IVH4 418 aaKnown RBP12.2□□□□□ -0.46
HMGN1-213ENST00000482192 MCOLN2Q8IZK6 566 aa12.2□□□□□ -0.46
HMGN1-213ENST00000482192 DCAF4L2Q8NA75 395 aa12.2□□□□□ -0.46
HMGN1-213ENST00000482192 GANCQ8TET4 914 aa12.2□□□□□ -0.46
HMGN1-213ENST00000482192 FRS2Q8WU20 508 aa12.2□□□□□ -0.46
HMGN1-213ENST00000482192 DNASE2BQ8WZ79 361 aa12.2□□□□□ -0.46
HMGN1-213ENST00000482192 NTAN1Q96AB6 310 aa12.2□□□□□ -0.46
HMGN1-213ENST00000482192 RAB6CQ9H0N0 254 aa12.2□□□□□ -0.46
HMGN1-213ENST00000482192 HAUS4Q9H6D7 363 aa12.2□□□□□ -0.46
HMGN1-213ENST00000482192 SGK2Q9HBY8 427 aa12.2□□□□□ -0.46
HMGN1-213ENST00000482192 CAPN10Q9HC96 672 aa12.2□□□□□ -0.46
HMGN1-213ENST00000482192 OR12D3Q9UGF7 316 aa12.2□□□□□ -0.46
HMGN1-213ENST00000482192 HS3ST2Q9Y278 367 aa12.2□□□□□ -0.46
HMGN1-213ENST00000482192 MYO18AQ92614 2054 aaKnown RBP12.2□□□□□ -0.46
HMGN1-213ENST00000482192 A0A1W2PQJ5 194 aa12.19□□□□□ -0.46
HMGN1-213ENST00000482192 ILVBLA1L0T0 632 aa12.19□□□□□ -0.46
HMGN1-213ENST00000482192 CDX4O14627 284 aaPredicted RBP12.19□□□□□ -0.46
HMGN1-213ENST00000482192 TM4SF5O14894 197 aa12.19□□□□□ -0.46
HMGN1-213ENST00000482192 ADH1BP00325 375 aa12.19□□□□□ -0.46
HMGN1-213ENST00000482192 C5AR1P21730 350 aa12.19□□□□□ -0.46
HMGN1-213ENST00000482192 MAOBP27338 520 aa12.19□□□□□ -0.46
HMGN1-213ENST00000482192 SLC8A1P32418 973 aa12.19□□□□□ -0.46
HMGN1-213ENST00000482192 MAPK8P45983 427 aa12.19□□□□□ -0.46
HMGN1-213ENST00000482192 PSMD8P48556 350 aa12.19□□□□□ -0.46
HMGN1-213ENST00000482192 ATXN3P54252 364 aaPredicted RBP12.19□□□□□ -0.46
HMGN1-213ENST00000482192 KLHL30Q0D2K2 578 aa12.19□□□□□ -0.46
HMGN1-213ENST00000482192 ACCSLQ4AC99 568 aa12.19□□□□□ -0.46
HMGN1-213ENST00000482192 PPM1JQ5JR12 505 aa12.19□□□□□ -0.46
HMGN1-213ENST00000482192 ARTNQ5T4W7 220 aa12.19□□□□□ -0.46
HMGN1-213ENST00000482192 MANEALQ5VSG8 457 aa12.19□□□□□ -0.46
HMGN1-213ENST00000482192 E4F1Q66K89 784 aaPredicted RBP12.19□□□□□ -0.46
HMGN1-213ENST00000482192 DCUN1D2Q6PH85 259 aa12.19□□□□□ -0.46
HMGN1-213ENST00000482192 DSG4Q86SJ6 1040 aa12.19□□□□□ -0.46
HMGN1-213ENST00000482192 STK40Q8N2I9 435 aa12.19□□□□□ -0.46
HMGN1-213ENST00000482192 SH2D3CQ8N5H7 860 aa12.19□□□□□ -0.46
HMGN1-213ENST00000482192 CCDC185Q8N715 623 aa12.19□□□□□ -0.46
HMGN1-213ENST00000482192 IQCDQ96DY2 449 aa12.19□□□□□ -0.46
HMGN1-213ENST00000482192 FAM129BQ96TA1 746 aa12.19□□□□□ -0.46
HMGN1-213ENST00000482192 OMDQ99983 421 aa12.19□□□□□ -0.46
HMGN1-213ENST00000482192 CNPY3Q9BT09 278 aa12.19□□□□□ -0.46
HMGN1-213ENST00000482192 MIR1-1HGQ9H1L0 117 aa12.19□□□□□ -0.46
HMGN1-213ENST00000482192 OSBPL2Q9H1P3 480 aa12.19□□□□□ -0.46
HMGN1-213ENST00000482192 RETREG1Q9H6L5 497 aa12.19□□□□□ -0.46
HMGN1-213ENST00000482192 PARVAQ9NVD7 372 aa12.19□□□□□ -0.46
HMGN1-213ENST00000482192 FBXL12Q9NXK8 326 aa12.19□□□□□ -0.46
HMGN1-213ENST00000482192 TAS2R14Q9NYV8 317 aa12.19□□□□□ -0.46
HMGN1-213ENST00000482192 ZNF212Q9UDV6 495 aa12.19□□□□□ -0.46
HMGN1-213ENST00000482192 VPS51Q9UID3 782 aa12.19□□□□□ -0.46
HMGN1-213ENST00000482192 FZD4Q9ULV1 537 aa12.19□□□□□ -0.46
HMGN1-213ENST00000482192 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.19□□□□□ -0.46
HMGN1-213ENST00000482192 A0A0D9SEW6 157 aa12.18□□□□□ -0.46
HMGN1-213ENST00000482192 A0A1B0GTW7 788 aa12.18□□□□□ -0.46
HMGN1-213ENST00000482192 A0A1W2PP55 124 aa12.18□□□□□ -0.46
HMGN1-213ENST00000482192 MED19A0JLT2 244 aaPredicted RBP12.18□□□□□ -0.46
HMGN1-213ENST00000482192 TMCO5BA8MYB1 307 aa12.18□□□□□ -0.46
HMGN1-213ENST00000482192 ARHGAP33O14559 1287 aa12.18□□□□□ -0.46
HMGN1-213ENST00000482192 ALOX15BO15296 676 aa12.18□□□□□ -0.46
HMGN1-213ENST00000482192 MID1O15344 667 aa12.18□□□□□ -0.46
HMGN1-213ENST00000482192 BCAT2O15382 392 aaPredicted RBP12.18□□□□□ -0.46
HMGN1-213ENST00000482192 CCP110O43303 1012 aa12.18□□□□□ -0.46
HMGN1-213ENST00000482192 RNASEH2AO75792 299 aaKnown RBP12.18□□□□□ -0.46
HMGN1-213ENST00000482192 IL1BP01584 269 aa12.18□□□□□ -0.46
HMGN1-213ENST00000482192 TPM3P06753 285 aa12.18□□□□□ -0.46
HMGN1-213ENST00000482192 SYPP08247 313 aa12.18□□□□□ -0.46
HMGN1-213ENST00000482192 GZMAP12544 262 aa12.18□□□□□ -0.46
HMGN1-213ENST00000482192 VAV1P15498 845 aa12.18□□□□□ -0.46
HMGN1-213ENST00000482192 ETFBP38117 255 aa12.18□□□□□ -0.46
HMGN1-213ENST00000482192 PBX1P40424 430 aa12.18□□□□□ -0.46
HMGN1-213ENST00000482192 MAPKAPK2P49137 400 aa12.18□□□□□ -0.46
HMGN1-213ENST00000482192 CLCN6P51797 869 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms