RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 NPNTQ6UXI9 565 aa10.41□□□□□ -0.74
USP39-215ENST00000481409 CEP128Q6ZU80 1094 aa10.41□□□□□ -0.74
USP39-215ENST00000481409 BBS5Q8N3I7 341 aa10.41□□□□□ -0.74
USP39-215ENST00000481409 CCNYQ8ND76 341 aa10.41□□□□□ -0.74
USP39-215ENST00000481409 ARHGEF2Q92974 986 aaKnown RBP10.41□□□□□ -0.74
USP39-215ENST00000481409 IRF7Q92985 503 aa10.41□□□□□ -0.74
USP39-215ENST00000481409 ACDQ96AP0 544 aa10.41□□□□□ -0.74
USP39-215ENST00000481409 LRCH3Q96II8 777 aa10.41□□□□□ -0.74
USP39-215ENST00000481409 XPO6Q96QU8 1125 aaKnown RBP10.41□□□□□ -0.74
USP39-215ENST00000481409 CDX2Q99626 313 aaPredicted RBP10.41□□□□□ -0.74
USP39-215ENST00000481409 TMEM121Q9BTD3 319 aa10.41□□□□□ -0.74
USP39-215ENST00000481409 FRMD8Q9BZ67 464 aaPredicted RBP10.41□□□□□ -0.74
USP39-215ENST00000481409 FOXP3Q9BZS1 431 aa10.41□□□□□ -0.74
USP39-215ENST00000481409 UBE2ZQ9H832 354 aaPredicted RBP10.41□□□□□ -0.74
USP39-215ENST00000481409 USP29Q9HBJ7 922 aa10.41□□□□□ -0.74
USP39-215ENST00000481409 DUS2Q9NX74 493 aaKnown RBP10.41□□□□□ -0.74
USP39-215ENST00000481409 WHRNQ9P202 907 aa10.41□□□□□ -0.74
USP39-215ENST00000481409 SAE1Q9UBE0 346 aaPredicted RBP10.41□□□□□ -0.74
USP39-215ENST00000481409 CCL26Q9Y258 94 aa10.41□□□□□ -0.74
USP39-215ENST00000481409 RANBP2P49792 3224 aaKnown RBP10.41□□□□□ -0.74
USP39-215ENST00000481409 A0A0A0MRY4 1105 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 GOLGA6CA6NDK9 693 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 GOLGA6BA6NDN3 693 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 HEPACAM2A8MVW5 462 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 RASA4BC9J798 803 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 CHADO15335 359 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 KCNN4O15554 427 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 TTI1O43156 1089 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 PSMD3O43242 534 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 RASA4O43374 803 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 KDELR3O43731 214 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 MAFKO60675 156 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 GOLGA6DP0CG33 693 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 FOSL2P15408 326 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 PSMC3P17980 439 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 CES1P23141 567 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 HOXD9P28356 352 aaPredicted RBP10.4□□□□□ -0.74
USP39-215ENST00000481409 RBL1P28749 1068 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 GBP2P32456 591 aaPredicted RBP10.4□□□□□ -0.74
USP39-215ENST00000481409 FDFT1P37268 417 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 GGCXP38435 758 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 HSPA9P38646 679 aaKnown RBP10.4□□□□□ -0.74
USP39-215ENST00000481409 EIF2DP41214 584 aaKnown RBP10.4□□□□□ -0.74
USP39-215ENST00000481409 KCNJ1P48048 391 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 PAPOLAP51003 745 aaKnown RBP10.4□□□□□ -0.74
USP39-215ENST00000481409 RPS24P62847 133 aaKnown RBP10.4□□□□□ -0.74
USP39-215ENST00000481409 IFI35P80217 286 aaPredicted RBP10.4□□□□□ -0.74
USP39-215ENST00000481409 CDK16Q00536 496 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 SULT2A1Q06520 285 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 DLX2Q07687 328 aaPredicted RBP10.4□□□□□ -0.74
USP39-215ENST00000481409 SLC20A2Q08357 652 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 AP1B1Q10567 949 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 CALCOCO2Q13137 446 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 ERCC6LQ2NKX8 1250 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 MAP9Q49MG5 647 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 TEX44Q53QW1 395 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 FYB2Q5VWT5 728 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 DUPD1Q68J44 220 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 ITPRIPL1Q6GPH6 555 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 EP400NLQ6ZTU2 488 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 TFAP2DQ7Z6R9 452 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 HOOK3Q86VS8 718 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 MFN1Q8IWA4 741 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 YAF2Q8IY57 180 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 DCAF4L2Q8NA75 395 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 MAML1Q92585 1016 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 HLA-CQ95604 372 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 WBP2Q969T9 261 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 EXOC4Q96A65 974 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 P2RY11Q96G91 374 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 SNF8Q96H20 258 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 SPATA13Q96N96 652 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 C2orf49Q9BVC5 232 aaPredicted RBP10.4□□□□□ -0.74
USP39-215ENST00000481409 ACE2Q9BYF1 805 aaPredicted RBP10.4□□□□□ -0.74
USP39-215ENST00000481409 PHACTR1Q9C0D0 580 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 SLC39A8Q9C0K1 460 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 POMKQ9H5K3 350 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 GDF3Q9NR23 364 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 GOLGA6AQ9NYA3 693 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 IPO11Q9UI26 975 aaKnown RBP10.4□□□□□ -0.74
USP39-215ENST00000481409 RAB21Q9UL25 225 aa10.4□□□□□ -0.74
USP39-215ENST00000481409 USP15Q9Y4E8 981 aaPredicted RBP10.4□□□□□ -0.74
USP39-215ENST00000481409 ERI2A8K979 691 aaKnown RBP10.39□□□□□ -0.75
USP39-215ENST00000481409 ANHXE9PGG2 379 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 AP3B1O00203 1094 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 DFFAO00273 331 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 MBTPS2O43462 519 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 CACNG3O60359 315 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 PRAMEF11O60813 436 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 ERLIN1O75477 346 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 RHOXF2BP0C7M4 288 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 CCNB1P14635 433 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 FCARP24071 287 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 GUCY2DQ02846 1103 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 BRD3Q15059 726 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 DHCR24Q15392 516 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 SLC14A2Q15849 920 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 PARP6Q2NL67 630 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 EML3Q32P44 896 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 LEXMQ3ZCV2 418 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms