RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 SIM1P81133 766 aaPredicted RBP11.76□□□□□ -0.53
CCM2-213ENST00000480658 NRG1Q02297 640 aaPredicted RBP11.76□□□□□ -0.53
CCM2-213ENST00000480658 CENPCQ03188 943 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 UBXN1Q04323 297 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 ACCSLQ4AC99 568 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 FILIP1LQ4L180 1135 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 TAF3Q5VWG9 929 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 NAA35Q5VZE5 725 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 DPY19L2P1Q6NXN4 242 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 NEK5Q6P3R8 708 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 STRADAQ7RTN6 431 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 GLRX5Q86SX6 157 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 NOP9Q86U38 636 aaKnown RBP11.76□□□□□ -0.53
CCM2-213ENST00000480658 MMAAQ8IVH4 418 aaKnown RBP11.76□□□□□ -0.53
CCM2-213ENST00000480658 ZNF366Q8N895 744 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 DEFB124Q8NES8 71 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 FAM174AQ8TBP5 190 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 GPT2Q8TD30 523 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 BIRC7Q96CA5 298 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 ERLEC1Q96DZ1 483 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 CNTNAP3BQ96NU0 1288 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 ERGIC2Q96RQ1 377 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 CNTNAP3Q9BZ76 1288 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 ZYG11BQ9C0D3 744 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 CEP44Q9C0F1 390 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 SIK2Q9H0K1 926 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 GANQ9H2C0 597 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 C6orf106Q9H6K1 298 aaPredicted RBP11.76□□□□□ -0.53
CCM2-213ENST00000480658 GAREM1Q9H706 876 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 CD93Q9NPY3 652 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 FANCLQ9NW38 375 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 NOCTQ9UK39 431 aaKnown RBP11.76□□□□□ -0.53
CCM2-213ENST00000480658 DMTF1Q9Y222 760 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 NEUROG3Q9Y4Z2 214 aa11.76□□□□□ -0.53
CCM2-213ENST00000480658 NCOR2Q9Y618 2525 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 ILVBLA1L0T0 632 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 DRGXA6NNA5 263 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 TTC34A8MYJ7 566 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 MCF2LO15068 1137 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 VILLO15195 856 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 MID1O15344 667 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 PCDHGA12O60330 932 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 GFPT2O94808 682 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 ENDOD1O94919 500 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 MMEP08473 750 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 PNMA6AP0CW24 399 aaPredicted RBP11.75□□□□□ -0.53
CCM2-213ENST00000480658 PTMSP20962 102 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 MAOBP27338 520 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 GRK6P43250 576 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 PTPN9P43378 593 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 PSMD8P48556 350 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 ARRB1P49407 418 aaPredicted RBP11.75□□□□□ -0.53
CCM2-213ENST00000480658 COPB1P53618 953 aaKnown RBP11.75□□□□□ -0.53
CCM2-213ENST00000480658 ADPRHP54922 357 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 TPM4P67936 248 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 FOXC1Q12948 553 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 ST3GAL2Q16842 350 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 MMS22LQ6ZRQ5 1243 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 BNIPLQ7Z465 357 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 PRPF39Q86UA1 669 aaKnown RBP11.75□□□□□ -0.53
CCM2-213ENST00000480658 IQCHQ86VS3 1027 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 APCDD1Q8J025 514 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 SH2D3CQ8N5H7 860 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 ATP11CQ8NB49 1132 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 C1orf216Q8TAB5 229 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 PTPRN2Q92932 1015 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 FAM131CQ96AQ9 280 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 PREBQ9HCU5 417 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 TM9SF3Q9HD45 589 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 TM7SF3Q9NS93 570 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 TMEM59LQ9UK28 342 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 AJAP1Q9UKB5 411 aaPredicted RBP11.75□□□□□ -0.53
CCM2-213ENST00000480658 HPCAL4Q9UM19 191 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 ANKRD6Q9Y2G4 727 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 MYO18AQ92614 2054 aaKnown RBP11.75□□□□□ -0.53
CCM2-213ENST00000480658 ABCA7Q8IZY2 2146 aa11.75□□□□□ -0.53
CCM2-213ENST00000480658 A0A1W2PP55 124 aa11.74□□□□□ -0.53
CCM2-213ENST00000480658 ZSCAN5CA6NGD5 496 aaPredicted RBP11.74□□□□□ -0.53
CCM2-213ENST00000480658 EIF3CLB5ME19 914 aaKnown RBP11.74□□□□□ -0.53
CCM2-213ENST00000480658 E9PAM4 449 aa11.74□□□□□ -0.53
CCM2-213ENST00000480658 GOLGA8SH3BPF8 625 aa11.74□□□□□ -0.53
CCM2-213ENST00000480658 KRT3P12035 628 aa11.74□□□□□ -0.53
CCM2-213ENST00000480658 CD59P13987 128 aa11.74□□□□□ -0.53
CCM2-213ENST00000480658 FERP16591 822 aa11.74□□□□□ -0.53
CCM2-213ENST00000480658 HTR7P34969 479 aa11.74□□□□□ -0.53
CCM2-213ENST00000480658 FLT3P36888 993 aa11.74□□□□□ -0.53
CCM2-213ENST00000480658 MAPKAPK2P49137 400 aa11.74□□□□□ -0.53
CCM2-213ENST00000480658 GALCP54803 685 aa11.74□□□□□ -0.53
CCM2-213ENST00000480658 PITX1P78337 314 aaPredicted RBP11.74□□□□□ -0.53
CCM2-213ENST00000480658 C1QBPQ07021 282 aaKnown RBP11.74□□□□□ -0.53
CCM2-213ENST00000480658 TRIP6Q15654 476 aaKnown RBP11.74□□□□□ -0.53
CCM2-213ENST00000480658 HLA-BQ31612 363 aa11.74□□□□□ -0.53
CCM2-213ENST00000480658 SETMARQ53H47 684 aaPredicted RBP11.74□□□□□ -0.53
CCM2-213ENST00000480658 NCEH1Q6PIU2 408 aa11.74□□□□□ -0.53
CCM2-213ENST00000480658 TRIM69Q86WT6 500 aa11.74□□□□□ -0.53
CCM2-213ENST00000480658 PHF13Q86YI8 300 aaPredicted RBP11.74□□□□□ -0.53
CCM2-213ENST00000480658 C3orf20Q8ND61 904 aa11.74□□□□□ -0.53
CCM2-213ENST00000480658 TMIEQ8NEW7 156 aa11.74□□□□□ -0.53
CCM2-213ENST00000480658 OR14C36Q8NHC7 312 aa11.74□□□□□ -0.53
CCM2-213ENST00000480658 SETD7Q8WTS6 366 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms