RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 PKN3Q6P5Z2 889 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 RFX8Q6ZV50 586 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 CHST9Q7L1S5 443 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 MFN1Q8IWA4 741 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 TP53INP2Q8IXH6 220 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.57□□□□□ -0.4
TRA2B-212ENST00000480461 NETO2Q8NC67 525 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 SORCS1Q8WY21 1168 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 ALG3Q92685 438 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 TBC1D31Q96DN5 1066 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 CSPG4P5Q96PW8 444 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 FEM1AQ9BSK4 669 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 LMAN1LQ9HAT1 526 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 ZDHHC4Q9NPG8 344 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 ARHGEF4Q9NR80 690 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 POLR3BQ9NW08 1133 aaPredicted RBP12.57□□□□□ -0.4
TRA2B-212ENST00000480461 C2orf42Q9NWW7 574 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 PACSIN2Q9UNF0 486 aaPredicted RBP12.57□□□□□ -0.4
TRA2B-212ENST00000480461 FRYQ5TBA9 3013 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 CEP295Q9C0D2 2601 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 ASPMQ8IZT6 3477 aa12.56□□□□□ -0.4
TRA2B-212ENST00000480461 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.56□□□□□ -0.4
TRA2B-212ENST00000480461 TBC1D3BA6NDS4 549 aa12.56□□□□□ -0.4
TRA2B-212ENST00000480461 WASH4PA8MWX3 477 aa12.56□□□□□ -0.4
TRA2B-212ENST00000480461 H0Y626 953 aa12.56□□□□□ -0.4
TRA2B-212ENST00000480461 EEF2KO00418 725 aaKnown RBP12.56□□□□□ -0.4
TRA2B-212ENST00000480461 KRT86O43790 486 aa12.56□□□□□ -0.4
TRA2B-212ENST00000480461 SPOPO43791 374 aa12.56□□□□□ -0.4
TRA2B-212ENST00000480461 TDGF1P13385 188 aa12.56□□□□□ -0.4
TRA2B-212ENST00000480461 DESP17661 470 aa12.56□□□□□ -0.4
TRA2B-212ENST00000480461 ERCC2P18074 760 aa12.56□□□□□ -0.4
TRA2B-212ENST00000480461 CSKP41240 450 aa12.56□□□□□ -0.4
TRA2B-212ENST00000480461 CTSOP43234 321 aaPredicted RBP12.56□□□□□ -0.4
TRA2B-212ENST00000480461 KIR2DL1P43626 348 aaPredicted RBP12.56□□□□□ -0.4
TRA2B-212ENST00000480461 RPS9P46781 194 aaKnown RBP12.56□□□□□ -0.4
TRA2B-212ENST00000480461 PLK1P53350 603 aa12.56□□□□□ -0.4
TRA2B-212ENST00000480461 CDH6P55285 790 aa12.56□□□□□ -0.4
TRA2B-212ENST00000480461 AMPD2Q01433 879 aa12.56□□□□□ -0.4
TRA2B-212ENST00000480461 ZNF177Q13360 481 aaPredicted RBP12.56□□□□□ -0.4
TRA2B-212ENST00000480461 COL9A2Q14055 689 aaPredicted RBP12.56□□□□□ -0.4
TRA2B-212ENST00000480461 LPAL2Q16609 132 aa12.56□□□□□ -0.4
TRA2B-212ENST00000480461 FUT11Q495W5 492 aa12.56□□□□□ -0.4
TRA2B-212ENST00000480461 GRAMD4Q6IC98 578 aa12.56□□□□□ -0.4
TRA2B-212ENST00000480461 RHOT1Q8IXI2 618 aa12.56□□□□□ -0.4
TRA2B-212ENST00000480461 C17orf53Q8N3J3 647 aaPredicted RBP12.56□□□□□ -0.4
TRA2B-212ENST00000480461 TERB1Q8NA31 727 aa12.56□□□□□ -0.4
TRA2B-212ENST00000480461 KCTD6Q8NC69 237 aa12.56□□□□□ -0.4
TRA2B-212ENST00000480461 PCDH19Q8TAB3 1148 aa12.56□□□□□ -0.4
TRA2B-212ENST00000480461 RNF25Q96BH1 459 aaPredicted RBP12.56□□□□□ -0.4
TRA2B-212ENST00000480461 MSANTD3Q96H12 275 aa12.56□□□□□ -0.4
TRA2B-212ENST00000480461 CALR3Q96L12 384 aaKnown RBP12.56□□□□□ -0.4
TRA2B-212ENST00000480461 ACOX2Q99424 681 aa12.56□□□□□ -0.4
TRA2B-212ENST00000480461 NELL2Q99435 816 aa12.56□□□□□ -0.4
TRA2B-212ENST00000480461 PSMB7Q99436 277 aa12.56□□□□□ -0.4
TRA2B-212ENST00000480461 FAM126AQ9BYI3 521 aaPredicted RBP12.56□□□□□ -0.4
TRA2B-212ENST00000480461 TSGA10Q9BZW7 698 aa12.56□□□□□ -0.4
TRA2B-212ENST00000480461 TMEM248Q9NWD8 314 aa12.56□□□□□ -0.4
TRA2B-212ENST00000480461 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.56□□□□□ -0.4
TRA2B-212ENST00000480461 DNAI1Q9UI46 699 aa12.56□□□□□ -0.4
TRA2B-212ENST00000480461 GGA2Q9UJY4 613 aa12.56□□□□□ -0.4
TRA2B-212ENST00000480461 PCDHA3Q9Y5H8 950 aa12.56□□□□□ -0.4
TRA2B-212ENST00000480461 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.55□□□□□ -0.4
TRA2B-212ENST00000480461 DCLK1O15075 740 aa12.55□□□□□ -0.4
TRA2B-212ENST00000480461 DDX3YO15523 660 aaKnown RBP12.55□□□□□ -0.4
TRA2B-212ENST00000480461 NRDCO43847 1150 aa12.55□□□□□ -0.4
TRA2B-212ENST00000480461 KRT7P08729 469 aa12.55□□□□□ -0.4
TRA2B-212ENST00000480461 PABPC1P11940 636 aaKnown RBP12.55□□□□□ -0.4
TRA2B-212ENST00000480461 DRD1P21728 446 aa12.55□□□□□ -0.4
TRA2B-212ENST00000480461 GLDCP23378 1020 aa12.55□□□□□ -0.4
TRA2B-212ENST00000480461 OR1E1P30953 314 aa12.55□□□□□ -0.4
TRA2B-212ENST00000480461 CTNNA1P35221 906 aaKnown RBP12.55□□□□□ -0.4
TRA2B-212ENST00000480461 ACVRL1P37023 503 aa12.55□□□□□ -0.4
TRA2B-212ENST00000480461 TNFRSF4P43489 277 aa12.55□□□□□ -0.4
TRA2B-212ENST00000480461 TPI1P60174 286 aa12.55□□□□□ -0.4
TRA2B-212ENST00000480461 ADCY2Q08462 1091 aa12.55□□□□□ -0.4
TRA2B-212ENST00000480461 GRSF1Q12849 480 aaKnown RBP eCLIP12.55□□□□□ -0.4
TRA2B-212ENST00000480461 MTAPQ13126 283 aa12.55□□□□□ -0.4
TRA2B-212ENST00000480461 LLGL1Q15334 1064 aa12.55□□□□□ -0.4
TRA2B-212ENST00000480461 TAZQ16635 292 aa12.55□□□□□ -0.4
TRA2B-212ENST00000480461 ANKRD20A8PQ5CZ79 823 aa12.55□□□□□ -0.4
TRA2B-212ENST00000480461 PITRM1Q5JRX3 1037 aa12.55□□□□□ -0.4
TRA2B-212ENST00000480461 TTC39BQ5VTQ0 682 aaPredicted RBP12.55□□□□□ -0.4
TRA2B-212ENST00000480461 RNF219Q5W0B1 726 aaPredicted RBP12.55□□□□□ -0.4
TRA2B-212ENST00000480461 AFMIDQ63HM1 303 aa12.55□□□□□ -0.4
TRA2B-212ENST00000480461 LAIR1Q6GTX8 287 aa12.55□□□□□ -0.4
TRA2B-212ENST00000480461 AADACL2Q6P093 401 aa12.55□□□□□ -0.4
TRA2B-212ENST00000480461 MFSD7Q6UXD7 560 aa12.55□□□□□ -0.4
TRA2B-212ENST00000480461 Q6ZS52 159 aa12.55□□□□□ -0.4
TRA2B-212ENST00000480461 TXLNBQ8N3L3 684 aa12.55□□□□□ -0.4
TRA2B-212ENST00000480461 NPWQ8N729 165 aa12.55□□□□□ -0.4
TRA2B-212ENST00000480461 PQLC3Q8N755 202 aa12.55□□□□□ -0.4
TRA2B-212ENST00000480461 RTL3Q8N8U3 475 aaKnown RBP12.55□□□□□ -0.4
TRA2B-212ENST00000480461 OR7D4Q8NG98 312 aa12.55□□□□□ -0.4
TRA2B-212ENST00000480461 TTC17Q96AE7 1141 aa12.55□□□□□ -0.4
TRA2B-212ENST00000480461 FAF2Q96CS3 445 aa12.55□□□□□ -0.4
TRA2B-212ENST00000480461 EPAS1Q99814 870 aa12.55□□□□□ -0.4
TRA2B-212ENST00000480461 HERPUD2Q9BSE4 406 aa12.55□□□□□ -0.4
TRA2B-212ENST00000480461 ELOVL2Q9NXB9 296 aa12.55□□□□□ -0.4
TRA2B-212ENST00000480461 KIAA1522Q9P206 1035 aaPredicted RBP12.55□□□□□ -0.4
TRA2B-212ENST00000480461 ANGPTL2Q9UKU9 493 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms