RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 DNAAF5Q86Y56 855 aa15.88■□□□□ 0.13
C9orf3-217ENST00000479161 OR52K2Q8NGK3 314 aa15.88■□□□□ 0.13
C9orf3-217ENST00000479161 OR2T3Q8NH03 318 aa15.88■□□□□ 0.13
C9orf3-217ENST00000479161 CYB5D2Q8WUJ1 264 aa15.88■□□□□ 0.13
C9orf3-217ENST00000479161 TEKT4Q8WW24 435 aa15.88■□□□□ 0.13
C9orf3-217ENST00000479161 NUP85Q9BW27 656 aa15.88■□□□□ 0.13
C9orf3-217ENST00000479161 TRIM7Q9C029 511 aa15.88■□□□□ 0.13
C9orf3-217ENST00000479161 MAGEH1Q9H213 219 aa15.88■□□□□ 0.13
C9orf3-217ENST00000479161 CATSPERBQ9H7T0 1116 aa15.88■□□□□ 0.13
C9orf3-217ENST00000479161 ZDHHC4Q9NPG8 344 aa15.88■□□□□ 0.13
C9orf3-217ENST00000479161 MPP6Q9NZW5 540 aa15.88■□□□□ 0.13
C9orf3-217ENST00000479161 MYO1AQ9UBC5 1043 aa15.88■□□□□ 0.13
C9orf3-217ENST00000479161 USP18Q9UMW8 372 aa15.88■□□□□ 0.13
C9orf3-217ENST00000479161 SCML1Q9UN30 329 aa15.88■□□□□ 0.13
C9orf3-217ENST00000479161 SMG5Q9UPR3 1016 aaKnown RBP15.88■□□□□ 0.13
C9orf3-217ENST00000479161 RALGAPA1Q6GYQ0 2036 aa15.88■□□□□ 0.13
C9orf3-217ENST00000479161 FRYLO94915 3013 aa15.87■□□□□ 0.13
C9orf3-217ENST00000479161 GON4LQ3T8J9 2241 aa15.87■□□□□ 0.13
C9orf3-217ENST00000479161 EDDM13A0A1B0GTR0 161 aa15.87■□□□□ 0.13
C9orf3-217ENST00000479161 FAM72CH0Y354 149 aa15.87■□□□□ 0.13
C9orf3-217ENST00000479161 NDUFV2P19404 249 aa15.87■□□□□ 0.13
C9orf3-217ENST00000479161 WASP42768 502 aa15.87■□□□□ 0.13
C9orf3-217ENST00000479161 PXNP49023 591 aaPredicted RBP15.87■□□□□ 0.13
C9orf3-217ENST00000479161 COPAP53621 1224 aa15.87■□□□□ 0.13
C9orf3-217ENST00000479161 FAM72AQ5TYM5 149 aa15.87■□□□□ 0.13
C9orf3-217ENST00000479161 RNF219Q5W0B1 726 aaPredicted RBP15.87■□□□□ 0.13
C9orf3-217ENST00000479161 FAM72DQ6L9T8 149 aa15.87■□□□□ 0.13
C9orf3-217ENST00000479161 SLC36A4Q6YBV0 504 aa15.87■□□□□ 0.13
C9orf3-217ENST00000479161 CYP4V2Q6ZWL3 525 aaPredicted RBP15.87■□□□□ 0.13
C9orf3-217ENST00000479161 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.87■□□□□ 0.13
C9orf3-217ENST00000479161 FAM72BQ86X60 149 aa15.87■□□□□ 0.13
C9orf3-217ENST00000479161 TMPRSS6Q8IU80 811 aa15.87■□□□□ 0.13
C9orf3-217ENST00000479161 RHOT2Q8IXI1 618 aa15.87■□□□□ 0.13
C9orf3-217ENST00000479161 GPR161Q8N6U8 529 aaKnown RBP15.87■□□□□ 0.13
C9orf3-217ENST00000479161 RTL3Q8N8U3 475 aaKnown RBP15.87■□□□□ 0.13
C9orf3-217ENST00000479161 HMGB4Q8WW32 186 aa15.87■□□□□ 0.13
C9orf3-217ENST00000479161 RUBCNQ92622 972 aa15.87■□□□□ 0.13
C9orf3-217ENST00000479161 SPACA7Q96KW9 195 aa15.87■□□□□ 0.13
C9orf3-217ENST00000479161 ACE2Q9BYF1 805 aaPredicted RBP15.87■□□□□ 0.13
C9orf3-217ENST00000479161 MKRN2Q9H000 416 aaKnown RBP15.87■□□□□ 0.13
C9orf3-217ENST00000479161 PRDM16Q9HAZ2 1276 aa15.87■□□□□ 0.13
C9orf3-217ENST00000479161 PRSS16Q9NQE7 514 aa15.87■□□□□ 0.13
C9orf3-217ENST00000479161 ITM2CQ9NQX7 267 aa15.87■□□□□ 0.13
C9orf3-217ENST00000479161 USP36Q9P275 1121 aaKnown RBP15.87■□□□□ 0.13
C9orf3-217ENST00000479161 BCCIPQ9P287 314 aaKnown RBP eCLIP15.87■□□□□ 0.13
C9orf3-217ENST00000479161 SLC25A13Q9UJS0 675 aa15.87■□□□□ 0.13
C9orf3-217ENST00000479161 ANAPC7Q9UJX3 599 aa15.87■□□□□ 0.13
C9orf3-217ENST00000479161 VPS28Q9UK41 221 aa15.87■□□□□ 0.13
C9orf3-217ENST00000479161 AP4E1Q9UPM8 1137 aa15.87■□□□□ 0.13
C9orf3-217ENST00000479161 PCDHGA5Q9Y5G8 931 aa15.87■□□□□ 0.13
C9orf3-217ENST00000479161 SNX10Q9Y5X0 201 aa15.87■□□□□ 0.13
C9orf3-217ENST00000479161 CEP192Q8TEP8 1941 aa15.87■□□□□ 0.13
C9orf3-217ENST00000479161 RHOBTB1O94844 696 aa15.86■□□□□ 0.13
C9orf3-217ENST00000479161 RETP07949 1114 aa15.86■□□□□ 0.13
C9orf3-217ENST00000479161 OXTRP30559 389 aa15.86■□□□□ 0.13
C9orf3-217ENST00000479161 MAN1A1P33908 653 aa15.86■□□□□ 0.13
C9orf3-217ENST00000479161 ARHGAP25P42331 645 aa15.86■□□□□ 0.13
C9orf3-217ENST00000479161 GEMIN4P57678 1058 aaKnown RBP15.86■□□□□ 0.13
C9orf3-217ENST00000479161 GNA12Q03113 381 aa15.86■□□□□ 0.13
C9orf3-217ENST00000479161 SFSWAPQ12872 951 aaKnown RBP15.86■□□□□ 0.13
C9orf3-217ENST00000479161 DPYSL2Q16555 572 aa15.86■□□□□ 0.13
C9orf3-217ENST00000479161 PLK5Q496M5 336 aa15.86■□□□□ 0.13
C9orf3-217ENST00000479161 ASCL5Q7RTU5 278 aa15.86■□□□□ 0.13
C9orf3-217ENST00000479161 TMTC1Q8IUR5 882 aa15.86■□□□□ 0.13
C9orf3-217ENST00000479161 PLPP6Q8IY26 295 aa15.86■□□□□ 0.13
C9orf3-217ENST00000479161 UMODL1-AS1Q8N2C9 162 aa15.86■□□□□ 0.13
C9orf3-217ENST00000479161 ZNF564Q8TBZ8 553 aaPredicted RBP15.86■□□□□ 0.13
C9orf3-217ENST00000479161 FRS2Q8WU20 508 aa15.86■□□□□ 0.13
C9orf3-217ENST00000479161 ARHGEF26Q96DR7 871 aa15.86■□□□□ 0.13
C9orf3-217ENST00000479161 PSMB7Q99436 277 aa15.86■□□□□ 0.13
C9orf3-217ENST00000479161 MUC3BQ9H195 1237 aa15.86■□□□□ 0.13
C9orf3-217ENST00000479161 RSPH9Q9H1X1 276 aaPredicted RBP15.86■□□□□ 0.13
C9orf3-217ENST00000479161 RAD54BQ9Y620 910 aa15.86■□□□□ 0.13
C9orf3-217ENST00000479161 NYNRINQ9P2P1 1898 aaKnown RBP15.86■□□□□ 0.13
C9orf3-217ENST00000479161 ZSCAN5CA6NGD5 496 aaPredicted RBP15.85■□□□□ 0.13
C9orf3-217ENST00000479161 ALOX15BO15296 676 aa15.85■□□□□ 0.13
C9orf3-217ENST00000479161 FOXD2O60548 495 aaPredicted RBP15.85■□□□□ 0.13
C9orf3-217ENST00000479161 GFRA3O60609 400 aa15.85■□□□□ 0.13
C9orf3-217ENST00000479161 ZMPSTE24O75844 475 aa15.85■□□□□ 0.13
C9orf3-217ENST00000479161 EPHB2P29323 1055 aa15.85■□□□□ 0.13
C9orf3-217ENST00000479161 DPP6P42658 865 aa15.85■□□□□ 0.13
C9orf3-217ENST00000479161 HADHBP55084 474 aaKnown RBP15.85■□□□□ 0.13
C9orf3-217ENST00000479161 ELAVL3Q14576 367 aaKnown RBP15.85■□□□□ 0.13
C9orf3-217ENST00000479161 ELF2Q15723 593 aa15.85■□□□□ 0.13
C9orf3-217ENST00000479161 PARP15Q460N3 678 aa15.85■□□□□ 0.13
C9orf3-217ENST00000479161 C9orf64Q5T6V5 341 aa15.85■□□□□ 0.13
C9orf3-217ENST00000479161 RETSATQ6NUM9 610 aa15.85■□□□□ 0.13
C9orf3-217ENST00000479161 RWDD4Q6NW29 188 aaKnown RBP15.85■□□□□ 0.13
C9orf3-217ENST00000479161 CEP68Q76N32 757 aa15.85■□□□□ 0.13
C9orf3-217ENST00000479161 TFAP2DQ7Z6R9 452 aa15.85■□□□□ 0.13
C9orf3-217ENST00000479161 PGBD3Q8N328 593 aa15.85■□□□□ 0.13
C9orf3-217ENST00000479161 SH2D3CQ8N5H7 860 aa15.85■□□□□ 0.13
C9orf3-217ENST00000479161 FAM71BQ8TC56 605 aa15.85■□□□□ 0.13
C9orf3-217ENST00000479161 PRCCQ92733 491 aaPredicted RBP15.85■□□□□ 0.13
C9orf3-217ENST00000479161 PTPRN2Q92932 1015 aa15.85■□□□□ 0.13
C9orf3-217ENST00000479161 ISG20Q96AZ6 181 aaKnown RBP15.85■□□□□ 0.13
C9orf3-217ENST00000479161 SIPA1Q96FS4 1042 aa15.85■□□□□ 0.13
C9orf3-217ENST00000479161 CALR3Q96L12 384 aaKnown RBP15.85■□□□□ 0.13
C9orf3-217ENST00000479161 PEBP4Q96S96 227 aa15.85■□□□□ 0.13
C9orf3-217ENST00000479161 SNRNP25Q9BV90 132 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms