RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 ACE2Q9BYF1 805 aaPredicted RBP13.43□□□□□ -0.26
CHD3-210ENST00000479080 PDFQ9HBH1 243 aa13.43□□□□□ -0.26
CHD3-210ENST00000479080 NEU2Q9Y3R4 380 aa13.43□□□□□ -0.26
CHD3-210ENST00000479080 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.42□□□□□ -0.26
CHD3-210ENST00000479080 ILVBLA1L0T0 632 aa13.42□□□□□ -0.26
CHD3-210ENST00000479080 J3KR12 359 aa13.42□□□□□ -0.26
CHD3-210ENST00000479080 SNAP91O60641 907 aa13.42□□□□□ -0.26
CHD3-210ENST00000479080 RAMP2O60895 175 aa13.42□□□□□ -0.26
CHD3-210ENST00000479080 NFATC1O95644 943 aa13.42□□□□□ -0.26
CHD3-210ENST00000479080 RBP3P10745 1247 aa13.42□□□□□ -0.26
CHD3-210ENST00000479080 CHRM1P11229 460 aaPredicted RBP13.42□□□□□ -0.26
CHD3-210ENST00000479080 RBL1P28749 1068 aa13.42□□□□□ -0.26
CHD3-210ENST00000479080 SOX9P48436 509 aa13.42□□□□□ -0.26
CHD3-210ENST00000479080 PPIDQ08752 370 aaKnown RBP13.42□□□□□ -0.26
CHD3-210ENST00000479080 ZNF177Q13360 481 aaPredicted RBP13.42□□□□□ -0.26
CHD3-210ENST00000479080 SERINC3Q13530 473 aa13.42□□□□□ -0.26
CHD3-210ENST00000479080 ANO4Q32M45 955 aa13.42□□□□□ -0.26
CHD3-210ENST00000479080 PUS10Q3MIT2 529 aaKnown RBP13.42□□□□□ -0.26
CHD3-210ENST00000479080 FUT11Q495W5 492 aa13.42□□□□□ -0.26
CHD3-210ENST00000479080 RNF219Q5W0B1 726 aaPredicted RBP13.42□□□□□ -0.26
CHD3-210ENST00000479080 SETD3Q86TU7 594 aaPredicted RBP13.42□□□□□ -0.26
CHD3-210ENST00000479080 KLHL7Q8IXQ5 586 aa13.42□□□□□ -0.26
CHD3-210ENST00000479080 LZTR1Q8N653 840 aa13.42□□□□□ -0.26
CHD3-210ENST00000479080 NAT16Q8N8M0 369 aa13.42□□□□□ -0.26
CHD3-210ENST00000479080 TTC13Q8NBP0 860 aa13.42□□□□□ -0.26
CHD3-210ENST00000479080 MAIP1Q8WWC4 291 aa13.42□□□□□ -0.26
CHD3-210ENST00000479080 ATP2A3Q93084 1043 aa13.42□□□□□ -0.26
CHD3-210ENST00000479080 MAGOHBQ96A72 148 aaKnown RBP13.42□□□□□ -0.26
CHD3-210ENST00000479080 HDAC11Q96DB2 347 aa13.42□□□□□ -0.26
CHD3-210ENST00000479080 NAP1L3Q99457 506 aaPredicted RBP13.42□□□□□ -0.26
CHD3-210ENST00000479080 TRMT61BQ9BVS5 477 aaKnown RBP13.42□□□□□ -0.26
CHD3-210ENST00000479080 RETREG1Q9H6L5 497 aa13.42□□□□□ -0.26
CHD3-210ENST00000479080 THEGQ9P2T0 379 aa13.42□□□□□ -0.26
CHD3-210ENST00000479080 KIAA1549LQ6ZVL6 1849 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 BCLAF3A2AJT9 711 aaKnown RBP13.41□□□□□ -0.26
CHD3-210ENST00000479080 C19orf67A6NJJ6 358 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 BHMG1C9JSJ3 638 aaPredicted RBP13.41□□□□□ -0.26
CHD3-210ENST00000479080 H0Y626 953 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 DFFAO00273 331 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 TULP3O75386 442 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 CYBBP04839 570 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 ETS1P14921 441 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 GJA4P35212 333 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 SERPINB6P35237 376 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 NR2C2P49116 596 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 FNTAP49354 379 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 YBEYP58557 167 aaPredicted RBP13.41□□□□□ -0.26
CHD3-210ENST00000479080 ARF5P84085 180 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 GAD2Q05329 585 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 WASHC5Q12768 1159 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 ZBTB17Q13105 803 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 XRCC4Q13426 336 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 CDH18Q13634 790 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 GEN1Q17RS7 908 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 SLC45A4Q5BKX6 768 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 C6orf118Q5T5N4 469 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 LEKR1Q6ZMV7 388 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 ADHFE1Q8IWW8 467 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 YAF2Q8IY57 180 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 PLCD3Q8N3E9 789 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 MMGT1Q8N4V1 131 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 MAML1Q92585 1016 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 EZH1Q92800 747 aaPredicted RBP13.41□□□□□ -0.26
CHD3-210ENST00000479080 TSGA13Q96PP4 275 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 KRT12Q99456 494 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 FEM1AQ9BSK4 669 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 TMEM121Q9BTD3 319 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 MAGEH1Q9H213 219 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 ABCB8Q9NUT2 735 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 THG1LQ9NWX6 298 aaKnown RBP13.41□□□□□ -0.26
CHD3-210ENST00000479080 HCN2Q9UL51 889 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 RAD54BQ9Y620 910 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 MYOFQ9NZM1 2061 aa13.41□□□□□ -0.26
CHD3-210ENST00000479080 MUC22E2RYF6 1773 aaPredicted RBP13.4□□□□□ -0.26
CHD3-210ENST00000479080 CTAGE15A4D2H0 777 aa13.4□□□□□ -0.26
CHD3-210ENST00000479080 H7C0C1 242 aa13.4□□□□□ -0.26
CHD3-210ENST00000479080 CCDC188H7C350 402 aa13.4□□□□□ -0.26
CHD3-210ENST00000479080 MCF2LO15068 1137 aa13.4□□□□□ -0.26
CHD3-210ENST00000479080 RAD51CO43502 376 aa13.4□□□□□ -0.26
CHD3-210ENST00000479080 PRAMEF11O60813 436 aa13.4□□□□□ -0.26
CHD3-210ENST00000479080 ADH1CP00326 375 aa13.4□□□□□ -0.26
CHD3-210ENST00000479080 ZSCAN5DPP0CG00 497 aa13.4□□□□□ -0.26
CHD3-210ENST00000479080 CTAGE8P0CG41 777 aa13.4□□□□□ -0.26
CHD3-210ENST00000479080 CHRNA3P32297 505 aa13.4□□□□□ -0.26
CHD3-210ENST00000479080 CTSOP43234 321 aaPredicted RBP13.4□□□□□ -0.26
CHD3-210ENST00000479080 ATP5OP48047 213 aa13.4□□□□□ -0.26
CHD3-210ENST00000479080 CLCN6P51797 869 aa13.4□□□□□ -0.26
CHD3-210ENST00000479080 PLK1P53350 603 aa13.4□□□□□ -0.26
CHD3-210ENST00000479080 BYSLQ13895 437 aaKnown RBP13.4□□□□□ -0.26
CHD3-210ENST00000479080 POLD3Q15054 466 aaPredicted RBP13.4□□□□□ -0.26
CHD3-210ENST00000479080 PDK1Q15118 436 aa13.4□□□□□ -0.26
CHD3-210ENST00000479080 PLEKHG6Q3KR16 790 aa13.4□□□□□ -0.26
CHD3-210ENST00000479080 PARP15Q460N3 678 aa13.4□□□□□ -0.26
CHD3-210ENST00000479080 PITRM1Q5JRX3 1037 aa13.4□□□□□ -0.26
CHD3-210ENST00000479080 CCDC137Q6PK04 289 aaKnown RBP13.4□□□□□ -0.26
CHD3-210ENST00000479080 TXNDC11Q6PKC3 985 aa13.4□□□□□ -0.26
CHD3-210ENST00000479080 ZNF783Q6ZMS7 281 aa13.4□□□□□ -0.26
CHD3-210ENST00000479080 CTAGE6Q86UF2 777 aa13.4□□□□□ -0.26
CHD3-210ENST00000479080 ADIPOR2Q86V24 386 aa13.4□□□□□ -0.26
CHD3-210ENST00000479080 CTAGE4Q8IX94 777 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms