RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-208ENST00000479003 THAP1Q9NVV9 213 aa28.15■■■□□ 2.1
CHKB-208ENST00000479003 SEPT10Q9P0V9 454 aa28.15■■■□□ 2.1
CHKB-208ENST00000479003 SLC17A6Q9P2U8 582 aa28.15■■■□□ 2.1
CHKB-208ENST00000479003 CAPN14A8MX76 684 aa28.14■■■□□ 2.1
CHKB-208ENST00000479003 GLRA3O75311 464 aa28.14■■■□□ 2.1
CHKB-208ENST00000479003 ATP5BP06576 529 aaKnown RBP28.14■■■□□ 2.1
CHKB-208ENST00000479003 CFAP61Q8NHU2 1237 aa28.14■■■□□ 2.1
CHKB-208ENST00000479003 MMADHCQ9H3L0 296 aaPredicted RBP28.14■■■□□ 2.1
CHKB-208ENST00000479003 DCLRE1BQ9H816 532 aa28.14■■■□□ 2.1
CHKB-208ENST00000479003 SYBUQ9NX95 663 aa28.14■■■□□ 2.1
CHKB-208ENST00000479003 ARMCX1Q9P291 453 aa28.14■■■□□ 2.1
CHKB-208ENST00000479003 EMCNQ9ULC0 261 aa28.14■■■□□ 2.1
CHKB-208ENST00000479003 ZNF189O75820 626 aaPredicted RBP28.13■■■□□ 2.09
CHKB-208ENST00000479003 TKTL1P51854 596 aa28.13■■■□□ 2.09
CHKB-208ENST00000479003 AIF1P55008 147 aa28.13■■■□□ 2.09
CHKB-208ENST00000479003 NME3Q13232 169 aa28.13■■■□□ 2.09
CHKB-208ENST00000479003 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.13■■■□□ 2.09
CHKB-208ENST00000479003 HFE2Q6ZVN8 426 aa28.13■■■□□ 2.09
CHKB-208ENST00000479003 PCED1BQ96HM7 432 aa28.13■■■□□ 2.09
CHKB-208ENST00000479003 PIH1D1Q9NWS0 290 aaKnown RBP28.13■■■□□ 2.09
CHKB-208ENST00000479003 TPP1O14773 563 aa28.13■■■□□ 2.09
CHKB-208ENST00000479003 IFRD2Q12894 506 aaPredicted RBP28.13■■■□□ 2.09
CHKB-208ENST00000479003 FASTKD1Q53R41 847 aaKnown RBP28.13■■■□□ 2.09
CHKB-208ENST00000479003 NTAN1Q96AB6 310 aa28.13■■■□□ 2.09
CHKB-208ENST00000479003 MED10Q9BTT4 135 aa28.13■■■□□ 2.09
CHKB-208ENST00000479003 CDH9Q9ULB4 789 aa28.13■■■□□ 2.09
CHKB-208ENST00000479003 FYNP06241 537 aa28.12■■■□□ 2.09
CHKB-208ENST00000479003 AQP5P55064 265 aa28.12■■■□□ 2.09
CHKB-208ENST00000479003 PDE1CQ14123 709 aaPredicted RBP28.12■■■□□ 2.09
CHKB-208ENST00000479003 NPAS4Q8IUM7 802 aa28.12■■■□□ 2.09
CHKB-208ENST00000479003 MCUR1Q96AQ8 359 aa28.12■■■□□ 2.09
CHKB-208ENST00000479003 PPARGC1AQ9UBK2 798 aaKnown RBP28.12■■■□□ 2.09
CHKB-208ENST00000479003 LRRC42Q9Y546 428 aa28.12■■■□□ 2.09
CHKB-208ENST00000479003 FBXO21O94952 628 aa28.12■■■□□ 2.09
CHKB-208ENST00000479003 FAM200BP0CF97 657 aa28.12■■■□□ 2.09
CHKB-208ENST00000479003 PCSK1P29120 753 aa28.12■■■□□ 2.09
CHKB-208ENST00000479003 ADRA1BP35368 520 aa28.12■■■□□ 2.09
CHKB-208ENST00000479003 N4BP2L1Q5TBK1 243 aaPredicted RBP28.12■■■□□ 2.09
CHKB-208ENST00000479003 OVOS1Q6IE37 1185 aa28.12■■■□□ 2.09
CHKB-208ENST00000479003 METTL23Q86XA0 190 aa28.12■■■□□ 2.09
CHKB-208ENST00000479003 OR10T2Q8NGX3 314 aa28.12■■■□□ 2.09
CHKB-208ENST00000479003 SDAD1Q9NVU7 687 aaKnown RBP eCLIP28.12■■■□□ 2.092e-6■■■□□ 16
CHKB-208ENST00000479003 DCDC2Q9UHG0 476 aa28.12■■■□□ 2.09
CHKB-208ENST00000479003 DSEQ9UL01 958 aa28.12■■■□□ 2.09
CHKB-208ENST00000479003 RAD54BQ9Y620 910 aa28.12■■■□□ 2.09
CHKB-208ENST00000479003 TMEM189-UBE2V1I3L0A0 370 aa28.11■■■□□ 2.09
CHKB-208ENST00000479003 NRP1O14786 923 aa28.11■■■□□ 2.09
CHKB-208ENST00000479003 ITGA2BP08514 1039 aa28.11■■■□□ 2.09
CHKB-208ENST00000479003 KITP10721 976 aa28.11■■■□□ 2.09
CHKB-208ENST00000479003 PAX3P23760 479 aa28.11■■■□□ 2.09
CHKB-208ENST00000479003 MAP3K7CLP57077 242 aa28.11■■■□□ 2.09
CHKB-208ENST00000479003 KHDC1Q4VXA5 237 aaKnown RBP28.11■■■□□ 2.09
CHKB-208ENST00000479003 MBLAC2Q68D91 279 aa28.11■■■□□ 2.09
CHKB-208ENST00000479003 ZCCHC23Q6ZST2 131 aa28.11■■■□□ 2.09
CHKB-208ENST00000479003 TREML1Q86YW5 311 aa28.11■■■□□ 2.09
CHKB-208ENST00000479003 TP53INP2Q8IXH6 220 aa28.11■■■□□ 2.09
CHKB-208ENST00000479003 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP28.11■■■□□ 2.094e-6■□□□□ 8.2
CHKB-208ENST00000479003 TEX9Q8N6V9 391 aa28.11■■■□□ 2.09
CHKB-208ENST00000479003 TMEM209Q96SK2 561 aa28.11■■■□□ 2.09
CHKB-208ENST00000479003 SIKE1Q9BRV8 207 aa28.11■■■□□ 2.09
CHKB-208ENST00000479003 PRDM5Q9NQX1 630 aaPredicted RBP28.11■■■□□ 2.09
CHKB-208ENST00000479003 KRT82Q9NSB4 513 aa28.11■■■□□ 2.09
CHKB-208ENST00000479003 MARCOQ9UEW3 520 aaPredicted RBP28.11■■■□□ 2.09
CHKB-208ENST00000479003 PSAT1Q9Y617 370 aa28.11■■■□□ 2.09
CHKB-208ENST00000479003 TRIM43BA6NCK2 446 aa28.1■■■□□ 2.09
CHKB-208ENST00000479003 PLIN3O60664 434 aa28.1■■■□□ 2.09
CHKB-208ENST00000479003 POLBP06746 335 aa28.1■■■□□ 2.09
CHKB-208ENST00000479003 SCAPQ12770 1279 aa28.1■■■□□ 2.09
CHKB-208ENST00000479003 SEMA3BQ13214 749 aa28.1■■■□□ 2.09
CHKB-208ENST00000479003 SPANXN3Q5MJ09 141 aa28.1■■■□□ 2.09
CHKB-208ENST00000479003 BSPRYQ5W0U4 402 aa28.1■■■□□ 2.09
CHKB-208ENST00000479003 C16orf46Q6P387 395 aa28.1■■■□□ 2.09
CHKB-208ENST00000479003 FAM43BQ6ZT52 329 aaPredicted RBP28.1■■■□□ 2.09
CHKB-208ENST00000479003 PDZD4Q76G19 769 aaPredicted RBP28.1■■■□□ 2.09
CHKB-208ENST00000479003 PID1Q7Z2X4 250 aa28.1■■■□□ 2.09
CHKB-208ENST00000479003 NECAB2Q7Z6G3 386 aa28.1■■■□□ 2.09
CHKB-208ENST00000479003 ATP2A3Q93084 1043 aa28.1■■■□□ 2.09
CHKB-208ENST00000479003 TRIM43Q96BQ3 446 aaPredicted RBP28.1■■■□□ 2.09
CHKB-208ENST00000479003 ACBD6Q9BR61 282 aa28.1■■■□□ 2.09
CHKB-208ENST00000479003 ULBP1Q9BZM6 244 aa28.1■■■□□ 2.09
CHKB-208ENST00000479003 WDR6Q9NNW5 1121 aaKnown RBP28.1■■■□□ 2.09
CHKB-208ENST00000479003 FNDC1Q4ZHG4 1894 aaPredicted RBP28.1■■■□□ 2.09
CHKB-208ENST00000479003 TBKBP1A7MCY6 615 aa28.1■■■□□ 2.09
CHKB-208ENST00000479003 DAOAP59103 153 aa28.1■■■□□ 2.09
CHKB-208ENST00000479003 CNKSR3Q6P9H4 555 aa28.1■■■□□ 2.09
CHKB-208ENST00000479003 FAM35AQ86V20 835 aa28.1■■■□□ 2.09
CHKB-208ENST00000479003 SLC7A14Q8TBB6 771 aa28.1■■■□□ 2.09
CHKB-208ENST00000479003 TMEM106CQ9BVX2 250 aa28.1■■■□□ 2.09
CHKB-208ENST00000479003 BATF3Q9NR55 127 aa28.1■■■□□ 2.09
CHKB-208ENST00000479003 TMEM30AQ9NV96 361 aa28.1■■■□□ 2.09
CHKB-208ENST00000479003 FAM72CH0Y354 149 aa28.09■■■□□ 2.09
CHKB-208ENST00000479003 H0Y3Z8 333 aa28.09■■■□□ 2.09
CHKB-208ENST00000479003 UPP2O95045 317 aa28.09■■■□□ 2.09
CHKB-208ENST00000479003 FGF3P11487 239 aaPredicted RBP28.09■■■□□ 2.09
CHKB-208ENST00000479003 ERCC2P18074 760 aa28.09■■■□□ 2.09
CHKB-208ENST00000479003 IRX4P78413 519 aa28.09■■■□□ 2.09
CHKB-208ENST00000479003 TAF11Q15544 211 aa28.09■■■□□ 2.09
CHKB-208ENST00000479003 INSCQ1MX18 579 aa28.09■■■□□ 2.09
CHKB-208ENST00000479003 FAM72AQ5TYM5 149 aa28.09■■■□□ 2.09
CHKB-208ENST00000479003 FAM72DQ6L9T8 149 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms