RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 CPOQ8IVL8 374 aa4.53□□□□□ -1.68
CDC42BPA-212ENST00000478573 NAXEQ8NCW5 288 aa4.53□□□□□ -1.68
CDC42BPA-212ENST00000478573 SLC22A17Q8WUG5 538 aa4.53□□□□□ -1.68
CDC42BPA-212ENST00000478573 AFG1LQ8WV93 481 aa4.53□□□□□ -1.68
CDC42BPA-212ENST00000478573 ASB12Q8WXK4 309 aa4.53□□□□□ -1.68
CDC42BPA-212ENST00000478573 C3orf49Q96BT1 292 aa4.53□□□□□ -1.68
CDC42BPA-212ENST00000478573 VCPIP1Q96JH7 1222 aa4.53□□□□□ -1.68
CDC42BPA-212ENST00000478573 ADGRE3Q9BY15 652 aa4.53□□□□□ -1.68
CDC42BPA-212ENST00000478573 ABHD16BQ9H3Z7 469 aa4.53□□□□□ -1.68
CDC42BPA-212ENST00000478573 WASH6PQ9NQA3 447 aa4.53□□□□□ -1.68
CDC42BPA-212ENST00000478573 TMLHEQ9NVH6 421 aa4.53□□□□□ -1.68
CDC42BPA-212ENST00000478573 SLC13A4Q9UKG4 626 aa4.53□□□□□ -1.68
CDC42BPA-212ENST00000478573 FGD6Q6ZV73 1430 aa4.53□□□□□ -1.68
CDC42BPA-212ENST00000478573 SPHKAPQ2M3C7 1700 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 PZPP20742 1482 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 SLC38A8A6NNN8 435 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 E7EVH7 732 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 EYA2O00167 538 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 HOXC11O43248 304 aaPredicted RBP4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 CNPP09543 421 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 MMP8P22894 467 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 VAMP2P63027 116 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 SEMA3BQ13214 749 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 DNASE1L3Q13609 305 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 SEC23BQ15437 767 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 GALNTL6Q49A17 601 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 MIDNQ504T8 468 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 MAP3K21Q5TCX8 1036 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 ANO7Q6IWH7 933 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 RANBP10Q6VN20 620 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 RRAGAQ7L523 313 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 TMEM57Q8N5G2 664 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 PNPLA1Q8N8W4 532 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 NGDNQ8NEJ9 315 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 ZNF548Q8NEK5 533 aaPredicted RBP4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 ZNF398Q8TD17 642 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 SLC2A12Q8TD20 617 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 HMGB4Q8WW32 186 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 NPIPB3Q92617 1050 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 MCRS1Q96EZ8 462 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 EIF3CQ99613 913 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 EIF2AK1Q9BQI3 630 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 BRD8Q9H0E9 1235 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 LIN7CQ9NUP9 197 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 FBXO28Q9NVF7 368 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 GGA3Q9NZ52 723 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 MGAT4CQ9UBM8 478 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 HEY2Q9UBP5 337 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 CRYL1Q9Y2S2 319 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 TMEM98Q9Y2Y6 226 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 LRP12Q9Y561 859 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 IQGAP3Q86VI3 1631 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 UHRF1BP1Q6BDS2 1440 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 ERBINQ96RT1 1412 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 SYNMO15061 1565 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 ZMYM2Q9UBW7 1377 aa4.52□□□□□ -1.69
CDC42BPA-212ENST00000478573 ABCC3O15438 1527 aa4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 LMTK2Q8IWU2 1503 aa4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 SPAG9O60271 1321 aaKnown RBP4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 PLA2R1Q13018 1463 aa4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 FAM90A20PA6NIJ5 464 aa4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 MBD3L5A6NJ08 208 aaPredicted RBP4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 M0QZQ0 153 aa4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 NKX2-8O15522 239 aa4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 CRYABP02511 175 aaKnown RBP4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 ALPLP05186 524 aa4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 PSG1P11464 419 aa4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 HTR6P50406 440 aa4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 UBE3AQ05086 875 aa4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 RPS6KA2Q15349 733 aa4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 TWIST1Q15672 202 aa4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 MAPRE1Q15691 268 aaKnown RBP4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 AAK1Q2M2I8 961 aa4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 P3H1Q32P28 736 aa4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 VSTM1Q6UX27 236 aa4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 BBS12Q6ZW61 710 aa4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 RASGRP2Q7LDG7 609 aa4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 KRT27Q7Z3Y8 459 aa4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 PIM3Q86V86 326 aa4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 USP38Q8NB14 1042 aa4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 CSGALNACT1Q8TDX6 532 aa4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 MPP4Q96JB8 637 aa4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 FAR2Q96K12 515 aa4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 TWNKQ96RR1 684 aa4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 MECRQ9BV79 373 aa4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 KRTAP2-2Q9BYT5 123 aa4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 TMEM160Q9NX00 188 aa4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 WWOXQ9NZC7 414 aa4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 CFDP1Q9UEE9 299 aaPredicted RBP4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 KCND3Q9UK17 655 aa4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 DERAQ9Y315 318 aa4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 EFCAB6Q5THR3 1501 aa4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 IQGAP1P46940 1657 aa4.51□□□□□ -1.69
CDC42BPA-212ENST00000478573 PIK3C2BO00750 1634 aa4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 NEURL4Q96JN8 1562 aa4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 UGGT1Q9NYU2 1555 aa4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 DAPK1P53355 1430 aa4.5□□□□□ -1.69
CDC42BPA-212ENST00000478573 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms