RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, human

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2B-208	ENST00000478188	TAF4	O00268	1085 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	CCP110	O43303	1012 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	GJB3	O75712	270 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	ZNF806	P0C7X5	589 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	KRT9	P35527	623 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	CSK	P41240	450 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	WAS	P42768	502 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	SLC11A2	P49281	568 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	RPS14	P62263	151 aa	Known RBP	4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	TBX2	Q13207	712 aa	Predicted RBP	4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	SIM2	Q14190	667 aa	Predicted RBP	4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	NUMA1	Q14980	2115 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	C15orf59	Q2T9L4	293 aa	Predicted RBP	4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	PLEKHG6	Q3KR16	790 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	SPDYC	Q5MJ68	293 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	FKBP15	Q5T1M5	1219 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	FAM102A	Q5T9C2	384 aa	Predicted RBP	4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	TTC39B	Q5VTQ0	682 aa	Predicted RBP	4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	ANO7	Q6IWH7	933 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	PRR23C	Q6ZRP0	262 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	LURAP1L	Q8IV03	231 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	LGI2	Q8N0V4	545 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	CCAR2	Q8N163	923 aa	Known RBP	4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	CCDC185	Q8N715	623 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	TTC16	Q8NEE8	873 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	NEK11	Q8NG66	645 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	CCDC26	Q8TAB7	109 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	CYB5D2	Q8WUJ1	264 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	ATRIP	Q8WXE1	791 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	SYN2	Q92777	582 aa	Predicted RBP	4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	BHMT	Q93088	406 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	NTAN1	Q96AB6	310 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	HAPLN3	Q96S86	360 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	C11orf70	Q9BRQ4	267 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	TRIM7	Q9C029	511 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	ISCU	Q9H1K1	167 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	RSPH9	Q9H1X1	276 aa	Predicted RBP	4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	MTG2	Q9H4K7	406 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	ITM2C	Q9NQX7	267 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	TMEM74B	Q9NUR3	256 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	NDFIP2	Q9NV92	336 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	DDIT4	Q9NX09	232 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	PPARGC1A	Q9UBK2	798 aa	Known RBP	4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	EVL	Q9UI08	416 aa	Predicted RBP	4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	PILRB	Q9UKJ0	227 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	PTPRB	P23467	1997 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	FAM186A	A6NE01	2351 aa		4.37	□□□□□ -1.71
POLR2B-208	ENST00000478188	ZNF106	Q9H2Y7	1883 aa	Known RBP	4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	CXorf51A	A0A1B0GTR3	108 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188		A0A1B0GVM2	712 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	FAM170A	A1A519	330 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	TBC1D3B	A6NDS4	549 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	TCAF2	A6NFQ2	919 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	SIGLEC16	A6NMB1	481 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188		M0QYT0	321 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	ATP9B	O43861	1147 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	SRPRA	P08240	638 aa	Known RBP	4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	HLA-E	P13747	358 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	FER	P16591	822 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	CCR1	P32246	355 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	RDX	P35241	583 aa	Known RBP	4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	RFC1	P35251	1148 aa	Predicted RBP	4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	SULT1E1	P49888	294 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	RPL7A	P62424	266 aa	Known RBP	4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	CDK17	Q00537	523 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	PREPL	Q4J6C6	727 aa	Predicted RBP	4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	AFMID	Q63HM1	303 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	ACAD10	Q6JQN1	1059 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	STRADA	Q7RTN6	431 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	ERICH1	Q86X53	443 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	ATP6V0D2	Q8N8Y2	350 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	DDI1	Q8WTU0	396 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	RXFP2	Q8WXD0	754 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	PTPRN2	Q92932	1015 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	FAM149B1	Q96BN6	582 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	TMA16	Q96EY4	203 aa	Known RBP	4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	ZNF419	Q96HQ0	510 aa	Predicted RBP	4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	ACE2	Q9BYF1	805 aa	Predicted RBP	4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	OSBPL2	Q9H1P3	480 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	FAM204A	Q9H8W3	233 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	CAPN10	Q9HC96	672 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	SEMA4G	Q9NTN9	838 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	WSB2	Q9NYS7	404 aa	Predicted RBP	4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	SERGEF	Q9UGK8	458 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	ADAMTS1	Q9UHI8	967 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	CAPN11	Q9UMQ6	739 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	ERVW-1	Q9UQF0	538 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	WASH4P	A8MWX3	477 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188		E9PAM4	449 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	CDX4	O14627	284 aa	Predicted RBP	4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	SPINT1	O43278	529 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	TIMM44	O43615	452 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	CTSL	P07711	333 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	PLEK	P08567	350 aa	Predicted RBP	4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	DLD	P09622	509 aa	Known RBP	4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	RRM1	P23921	792 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	DRD3	P35462	400 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	PTGER3	P43115	390 aa		4.36	□□□□□ -1.71
POLR2B-208	ENST00000478188	STK19	P49842	368 aa	Predicted RBP	4.36	□□□□□ -1.71

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