RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 SARDHQ9UL12 918 aa7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 CACNA1DQ01668 2161 aa7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 COL27A1Q8IZC6 1860 aaPredicted RBP7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 UBE4BO95155 1302 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 CRYBG3Q68DQ2 2970 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 PRAMEF33A0A0G2JMD5 474 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 GOLGA6L7A0A1B0GV03 622 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 A0A1W2PQ27 194 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 A0A1W2PQ64 194 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 A0A1W2PQC6 194 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 TMX2-CTNND1H3BSU7 103 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 STX6O43752 255 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 PRAMEF10O60809 474 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 TBL1XO60907 577 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 SEMA7AO75326 666 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 VAV1P15498 845 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 NME1P15531 152 aaKnown RBP7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 CD44P16070 742 aaKnown RBP7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 PRLRP16471 622 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 SLC6A4P31645 630 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 UQCRFS1P47985 274 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 NEK4P51957 841 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 CLDN2P57739 230 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 YWHAGP61981 247 aaKnown RBP eCLIP7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 HMGN5P82970 282 aaKnown RBP7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 CNTN1Q12860 1018 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 FZD2Q14332 565 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 ZNF284Q2VY69 593 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 DEFB133Q30KQ1 61 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 ZNF699Q32M78 642 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 FSCBQ5H9T9 825 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 FHL5Q5TD97 284 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 RFWD3Q6PCD5 774 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 SCARA5Q6ZMJ2 495 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 GCNT7Q6ZNI0 430 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 MMS22LQ6ZRQ5 1243 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 Q6ZSR6 202 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 CENPQQ7L2Z9 268 aaPredicted RBP7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 MFN1Q8IWA4 741 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 SLC35F3Q8IY50 421 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 ARHGAP18Q8N392 663 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 ZNF557Q8N988 423 aaPredicted RBP7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 NAT6Q93015 286 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 BMFQ96LC9 184 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 TWNKQ96RR1 684 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 MYOCQ99972 504 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 DUSP16Q9BY84 665 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 FOXP3Q9BZS1 431 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 STRADBQ9C0K7 418 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 PREBQ9HCU5 417 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 FZD3Q9NPG1 666 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 FOXJ2Q9P0K8 574 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 PISDQ9UG56 409 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 PPM1HQ9ULR3 514 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 HBS1LQ9Y450 684 aaKnown RBP7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 PCDHB11Q9Y5F2 797 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 MYH11P35749 1972 aa7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 SETD2Q9BYW2 2564 aaPredicted RBP7.57□□□□□ -1.2
SPTLC1-205ENST00000477888 SPTY2D1-AS1A0A0U1RR47 76 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 A0A1W2PQM1 296 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 A0A1W2PQU0 124 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 A1L4Q6 167 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 C9orf172C9J069 976 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 IRAK2O43187 625 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 TGFB1I1O43294 461 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 AQP9O43315 295 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 PHACTR2O75167 634 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 VNN1O95497 513 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 KRT7P08729 469 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 JMJD7P0C870 316 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 ITIH1P19827 911 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 HNRNPA2B1P22626 353 aaKnown RBP7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 CCKBRP32239 447 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 LONP1P36776 959 aaKnown RBP7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 MLLT10P55197 1068 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 CLDN10P78369 228 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 ECT2LQ008S8 904 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 NCOA4Q13772 614 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 FAM133BQ5BKY9 247 aaKnown RBP7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 PITRM1Q5JRX3 1037 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 RAB41Q5JT25 222 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 PM20D1Q6GTS8 502 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 CAPRIN2Q6IMN6 1127 aaKnown RBP7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 NEK5Q6P3R8 708 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 BHLHA9Q7RTU4 235 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 DCP2Q8IU60 420 aaKnown RBP7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 SRRM1Q8IYB3 904 aaKnown RBP7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 FAM184AQ8NB25 1140 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 RASSF8Q8NHQ8 419 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 C9orf43Q8TAL5 461 aaPredicted RBP7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 FAM174AQ8TBP5 190 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 FRS2Q8WU20 508 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 KLK6Q92876 244 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 RPL10LQ96L21 214 aaKnown RBP7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 SPAG5Q96R06 1193 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 IL12RB2Q99665 862 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 UBXN6Q9BZV1 441 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 EPB41L5Q9HCM4 733 aa7.56□□□□□ -1.2
SPTLC1-205ENST00000477888 CUEDC1Q9NWM3 386 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms