RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 FRS2Q8WU20 508 aa20.89■□□□□ 0.93
PDLIM1-202ENST00000477757 EEF2KMTQ96G04 330 aa20.89■□□□□ 0.93
PDLIM1-202ENST00000477757 APOLD1Q96LR9 279 aa20.89■□□□□ 0.93
PDLIM1-202ENST00000477757 SERPINB11Q96P15 392 aa20.89■□□□□ 0.93
PDLIM1-202ENST00000477757 PREBQ9HCU5 417 aa20.89■□□□□ 0.93
PDLIM1-202ENST00000477757 SARDHQ9UL12 918 aa20.89■□□□□ 0.93
PDLIM1-202ENST00000477757 TLR6Q9Y2C9 796 aa20.89■□□□□ 0.93
PDLIM1-202ENST00000477757 U3KQA8 63 aa20.89■□□□□ 0.93
PDLIM1-202ENST00000477757 A0A1W2PNU3 283 aaPredicted RBP20.88■□□□□ 0.93
PDLIM1-202ENST00000477757 RPL13P26373 211 aaKnown RBP20.88■□□□□ 0.93
PDLIM1-202ENST00000477757 ME1P48163 572 aa20.88■□□□□ 0.93
PDLIM1-202ENST00000477757 CNTN1Q12860 1018 aa20.88■□□□□ 0.93
PDLIM1-202ENST00000477757 POM121L1PQ3SYA9 428 aa20.88■□□□□ 0.93
PDLIM1-202ENST00000477757 C3orf38Q5JPI3 329 aa20.88■□□□□ 0.93
PDLIM1-202ENST00000477757 DQX1Q8TE96 717 aaKnown RBP20.88■□□□□ 0.93
PDLIM1-202ENST00000477757 OR8D1Q8WZ84 308 aa20.88■□□□□ 0.93
PDLIM1-202ENST00000477757 SLC39A13Q96H72 371 aa20.88■□□□□ 0.93
PDLIM1-202ENST00000477757 ABCG4Q9H172 646 aa20.88■□□□□ 0.93
PDLIM1-202ENST00000477757 EVA1BQ9NVM1 165 aa20.88■□□□□ 0.93
PDLIM1-202ENST00000477757 SATB2Q9UPW6 733 aa20.88■□□□□ 0.93
PDLIM1-202ENST00000477757 MYL1P05976 194 aa20.87■□□□□ 0.93
PDLIM1-202ENST00000477757 VDRP11473 427 aa20.87■□□□□ 0.93
PDLIM1-202ENST00000477757 RGS7P49802 495 aa20.87■□□□□ 0.93
PDLIM1-202ENST00000477757 DUSP3P51452 185 aaPredicted RBP20.87■□□□□ 0.93
PDLIM1-202ENST00000477757 SRSF1Q07955 248 aaKnown RBP eCLIP20.87■□□□□ 0.93
PDLIM1-202ENST00000477757 CUL2Q13617 745 aa20.87■□□□□ 0.93
PDLIM1-202ENST00000477757 SLC12A1Q13621 1099 aa20.87■□□□□ 0.93
PDLIM1-202ENST00000477757 LCLAT1Q6UWP7 414 aa20.87■□□□□ 0.93
PDLIM1-202ENST00000477757 LGI2Q8N0V4 545 aa20.87■□□□□ 0.93
PDLIM1-202ENST00000477757 MAPK15Q8TD08 544 aa20.87■□□□□ 0.93
PDLIM1-202ENST00000477757 CLEC4CQ8WTT0 213 aa20.87■□□□□ 0.93
PDLIM1-202ENST00000477757 SLC35F5Q8WV83 523 aa20.87■□□□□ 0.93
PDLIM1-202ENST00000477757 CCDC97Q96F63 343 aaPredicted RBP20.87■□□□□ 0.93
PDLIM1-202ENST00000477757 SLC46A1Q96NT5 459 aa20.87■□□□□ 0.93
PDLIM1-202ENST00000477757 DOCK9Q9BZ29 2069 aa20.86■□□□□ 0.93
PDLIM1-202ENST00000477757 C1QTNF3-AMACRE9PGA6 284 aa20.86■□□□□ 0.93
PDLIM1-202ENST00000477757 PIK3R2O00459 728 aa20.86■□□□□ 0.93
PDLIM1-202ENST00000477757 ALOX15BO15296 676 aa20.86■□□□□ 0.93
PDLIM1-202ENST00000477757 STX10O60499 249 aa20.86■□□□□ 0.93
PDLIM1-202ENST00000477757 MOCS2O96007 188 aaPredicted RBP20.86■□□□□ 0.93
PDLIM1-202ENST00000477757 FYNP06241 537 aa20.86■□□□□ 0.93
PDLIM1-202ENST00000477757 MYF5P13349 255 aa20.86■□□□□ 0.93
PDLIM1-202ENST00000477757 KRT10P13645 584 aa20.86■□□□□ 0.93
PDLIM1-202ENST00000477757 PRLRP16471 622 aa20.86■□□□□ 0.93
PDLIM1-202ENST00000477757 RBMS1P29558 406 aaKnown RBP20.86■□□□□ 0.93
PDLIM1-202ENST00000477757 TAS2R38P59533 333 aa20.86■□□□□ 0.93
PDLIM1-202ENST00000477757 YWHAEP62258 255 aaKnown RBP20.86■□□□□ 0.93
PDLIM1-202ENST00000477757 SULT2A1Q06520 285 aa20.86■□□□□ 0.93
PDLIM1-202ENST00000477757 ADAM9Q13443 819 aa20.86■□□□□ 0.93
PDLIM1-202ENST00000477757 ZCWPW2Q504Y3 356 aa20.86■□□□□ 0.93
PDLIM1-202ENST00000477757 PMF1Q6P1K2 205 aa20.86■□□□□ 0.93
PDLIM1-202ENST00000477757 UBR7Q8N806 425 aa20.86■□□□□ 0.93
PDLIM1-202ENST00000477757 IFI44Q8TCB0 444 aa20.86■□□□□ 0.93
PDLIM1-202ENST00000477757 GRAMD1AQ96CP6 724 aa20.86■□□□□ 0.93
PDLIM1-202ENST00000477757 IFT43Q96FT9 208 aa20.86■□□□□ 0.93
PDLIM1-202ENST00000477757 MYOCQ99972 504 aa20.86■□□□□ 0.93
PDLIM1-202ENST00000477757 CALN1Q9BXU9 219 aa20.86■□□□□ 0.93
PDLIM1-202ENST00000477757 XPO7Q9UIA9 1087 aaKnown RBP20.86■□□□□ 0.93
PDLIM1-202ENST00000477757 KIAA1257Q9ULG3 409 aa20.86■□□□□ 0.93
PDLIM1-202ENST00000477757 PPM1HQ9ULR3 514 aa20.86■□□□□ 0.93
PDLIM1-202ENST00000477757 PCDHGA8Q9Y5G5 932 aa20.86■□□□□ 0.93
PDLIM1-202ENST00000477757 FLNCQ14315 2725 aa20.86■□□□□ 0.93
PDLIM1-202ENST00000477757 FBXO21O94952 628 aa20.85■□□□□ 0.93
PDLIM1-202ENST00000477757 VASPP50552 380 aaPredicted RBP20.85■□□□□ 0.93
PDLIM1-202ENST00000477757 OR13H1Q8NG92 308 aa20.85■□□□□ 0.93
PDLIM1-202ENST00000477757 DUSP23Q9BVJ7 150 aa20.85■□□□□ 0.93
PDLIM1-202ENST00000477757 OSBPL2Q9H1P3 480 aa20.85■□□□□ 0.93
PDLIM1-202ENST00000477757 CAAP1Q9H8G2 361 aa20.85■□□□□ 0.93
PDLIM1-202ENST00000477757 IL17BQ9UHF5 180 aa20.85■□□□□ 0.93
PDLIM1-202ENST00000477757 TLN1Q9Y490 2541 aaKnown RBP20.85■□□□□ 0.93
PDLIM1-202ENST00000477757 NEMP2A6NFY4 417 aa20.84■□□□□ 0.93
PDLIM1-202ENST00000477757 CDRT15L2A8MXV6 281 aa20.84■□□□□ 0.93
PDLIM1-202ENST00000477757 K7ESM1 405 aa20.84■□□□□ 0.93
PDLIM1-202ENST00000477757 SCAMP1O15126 338 aa20.84■□□□□ 0.93
PDLIM1-202ENST00000477757 SLC31A1O15431 190 aa20.84■□□□□ 0.93
PDLIM1-202ENST00000477757 RHOBTB3O94955 611 aa20.84■□□□□ 0.93
PDLIM1-202ENST00000477757 PDGFRAP16234 1089 aa20.84■□□□□ 0.93
PDLIM1-202ENST00000477757 PLK1P53350 603 aa20.84■□□□□ 0.93
PDLIM1-202ENST00000477757 RAP1GAP2Q684P5 730 aa20.84■□□□□ 0.93
PDLIM1-202ENST00000477757 CCDC81Q6ZN84 652 aa20.84■□□□□ 0.93
PDLIM1-202ENST00000477757 TAC4Q86UU9 113 aa20.84■□□□□ 0.93
PDLIM1-202ENST00000477757 CHSY1Q86X52 802 aa20.84■□□□□ 0.93
PDLIM1-202ENST00000477757 GUF1Q8N442 669 aaKnown RBP20.84■□□□□ 0.93
PDLIM1-202ENST00000477757 TFAP2BQ92481 460 aa20.84■□□□□ 0.93
PDLIM1-202ENST00000477757 ATXN7L3BQ96GX2 97 aa20.84■□□□□ 0.93
PDLIM1-202ENST00000477757 PRR11Q96HE9 360 aaPredicted RBP20.84■□□□□ 0.93
PDLIM1-202ENST00000477757 FOXD4L1Q9NU39 408 aa20.84■□□□□ 0.93
PDLIM1-202ENST00000477757 HEMK1Q9Y5R4 338 aaPredicted RBP20.84■□□□□ 0.93
PDLIM1-202ENST00000477757 A0A1W2PQU0 124 aa20.83■□□□□ 0.93
PDLIM1-202ENST00000477757 ATP9BO43861 1147 aa20.83■□□□□ 0.93
PDLIM1-202ENST00000477757 APOEP02649 317 aa20.83■□□□□ 0.93
PDLIM1-202ENST00000477757 TACR2P21452 398 aa20.83■□□□□ 0.93
PDLIM1-202ENST00000477757 TGM2P21980 687 aa20.83■□□□□ 0.93
PDLIM1-202ENST00000477757 AKT2P31751 481 aa20.83■□□□□ 0.93
PDLIM1-202ENST00000477757 MLLT3P42568 568 aaPredicted RBP20.83■□□□□ 0.93
PDLIM1-202ENST00000477757 NUMBP49757 651 aa20.83■□□□□ 0.93
PDLIM1-202ENST00000477757 NFATC3Q12968 1075 aa20.83■□□□□ 0.93
PDLIM1-202ENST00000477757 CLN3Q13286 438 aa20.83■□□□□ 0.93
PDLIM1-202ENST00000477757 ZNF284Q2VY69 593 aa20.83■□□□□ 0.93
PDLIM1-202ENST00000477757 CBWD6Q4V339 395 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms