RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 SFSWAPQ12872 951 aaKnown RBP22.35■■□□□ 1.17
COL9A3-211ENST00000477612 NR1I3Q14994 352 aa22.35■■□□□ 1.17
COL9A3-211ENST00000477612 C15orf59Q2T9L4 293 aaPredicted RBP22.35■■□□□ 1.17
COL9A3-211ENST00000477612 RETREG1Q9H6L5 497 aa22.35■■□□□ 1.17
COL9A3-211ENST00000477612 PPARGC1AQ9UBK2 798 aaKnown RBP22.35■■□□□ 1.17
COL9A3-211ENST00000477612 A0A1B0GTW7 788 aa22.34■■□□□ 1.17
COL9A3-211ENST00000477612 SYCE3A1L190 88 aa22.34■■□□□ 1.17
COL9A3-211ENST00000477612 MEI4A8MW99 385 aa22.34■■□□□ 1.17
COL9A3-211ENST00000477612 ARHGAP33O14559 1287 aa22.34■■□□□ 1.17
COL9A3-211ENST00000477612 SYPP08247 313 aa22.34■■□□□ 1.17
COL9A3-211ENST00000477612 ADRB1P08588 477 aa22.34■■□□□ 1.17
COL9A3-211ENST00000477612 PTMSP20962 102 aa22.34■■□□□ 1.17
COL9A3-211ENST00000477612 RFC1P35251 1148 aaPredicted RBP22.34■■□□□ 1.17
COL9A3-211ENST00000477612 ADRA1BP35368 520 aa22.34■■□□□ 1.17
COL9A3-211ENST00000477612 ELAVL3Q14576 367 aaKnown RBP22.34■■□□□ 1.17
COL9A3-211ENST00000477612 CST6Q15828 149 aa22.34■■□□□ 1.17
COL9A3-211ENST00000477612 RAB6CQ53S08 254 aa22.34■■□□□ 1.17
COL9A3-211ENST00000477612 SH3PXD2AQ5TCZ1 1133 aa22.34■■□□□ 1.17
COL9A3-211ENST00000477612 ACAD10Q6JQN1 1059 aa22.34■■□□□ 1.17
COL9A3-211ENST00000477612 WDR59Q6PJI9 974 aa22.34■■□□□ 1.17
COL9A3-211ENST00000477612 PHLDB2Q86SQ0 1253 aa22.34■■□□□ 1.17
COL9A3-211ENST00000477612 FAM124AQ86V42 546 aa22.34■■□□□ 1.17
COL9A3-211ENST00000477612 VCPIP1Q96JH7 1222 aa22.34■■□□□ 1.17
COL9A3-211ENST00000477612 PSMB7Q99436 277 aa22.34■■□□□ 1.17
COL9A3-211ENST00000477612 SELENOOQ9BVL4 669 aa22.34■■□□□ 1.17
COL9A3-211ENST00000477612 EDEM3Q9BZQ6 932 aa22.34■■□□□ 1.17
COL9A3-211ENST00000477612 TTYH3Q9C0H2 523 aa22.34■■□□□ 1.17
COL9A3-211ENST00000477612 RAB6CQ9H0N0 254 aa22.34■■□□□ 1.17
COL9A3-211ENST00000477612 OSBPL2Q9H1P3 480 aa22.34■■□□□ 1.17
COL9A3-211ENST00000477612 C6orf106Q9H6K1 298 aaPredicted RBP22.34■■□□□ 1.17
COL9A3-211ENST00000477612 AIPL1Q9NZN9 384 aa22.34■■□□□ 1.17
COL9A3-211ENST00000477612 ADAMTS1Q9UHI8 967 aa22.34■■□□□ 1.17
COL9A3-211ENST00000477612 SLC25A13Q9UJS0 675 aa22.34■■□□□ 1.17
COL9A3-211ENST00000477612 HS3ST2Q9Y278 367 aa22.34■■□□□ 1.17
COL9A3-211ENST00000477612 NCKAP1Q9Y2A7 1128 aa22.34■■□□□ 1.17
COL9A3-211ENST00000477612 NCOR2Q9Y618 2525 aa22.33■■□□□ 1.17
COL9A3-211ENST00000477612 UPK3BL1B0FP48 263 aa22.33■■□□□ 1.17
COL9A3-211ENST00000477612 UPK3BL2E5RIL1 263 aa22.33■■□□□ 1.17
COL9A3-211ENST00000477612 KCNK5O95279 499 aa22.33■■□□□ 1.17
COL9A3-211ENST00000477612 GJB6O95452 261 aa22.33■■□□□ 1.17
COL9A3-211ENST00000477612 SEMA4FO95754 770 aa22.33■■□□□ 1.17
COL9A3-211ENST00000477612 CSRP1P21291 193 aaKnown RBP22.33■■□□□ 1.17
COL9A3-211ENST00000477612 ARL13BQ3SXY8 428 aa22.33■■□□□ 1.17
COL9A3-211ENST00000477612 PPP1R15BQ5SWA1 713 aa22.33■■□□□ 1.17
COL9A3-211ENST00000477612 MANEALQ5VSG8 457 aa22.33■■□□□ 1.17
COL9A3-211ENST00000477612 PPP1R2P3Q6NXS1 205 aa22.33■■□□□ 1.17
COL9A3-211ENST00000477612 ZNF783Q6ZMS7 281 aa22.33■■□□□ 1.17
COL9A3-211ENST00000477612 MMAAQ8IVH4 418 aaKnown RBP22.33■■□□□ 1.17
COL9A3-211ENST00000477612 STK40Q8N2I9 435 aa22.33■■□□□ 1.17
COL9A3-211ENST00000477612 SH2D3CQ8N5H7 860 aa22.33■■□□□ 1.17
COL9A3-211ENST00000477612 FAM131CQ96AQ9 280 aa22.33■■□□□ 1.17
COL9A3-211ENST00000477612 CBX8Q9HC52 389 aa22.33■■□□□ 1.17
COL9A3-211ENST00000477612 OSGEPQ9NPF4 335 aa22.33■■□□□ 1.17
COL9A3-211ENST00000477612 FBXL12Q9NXK8 326 aa22.33■■□□□ 1.17
COL9A3-211ENST00000477612 MPP6Q9NZW5 540 aa22.33■■□□□ 1.17
COL9A3-211ENST00000477612 VPS28Q9UK41 221 aa22.33■■□□□ 1.17
COL9A3-211ENST00000477612 FZD4Q9ULV1 537 aa22.33■■□□□ 1.17
COL9A3-211ENST00000477612 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.33■■□□□ 1.17
COL9A3-211ENST00000477612 ILVBLA1L0T0 632 aa22.32■■□□□ 1.16
COL9A3-211ENST00000477612 MID1O15344 667 aa22.32■■□□□ 1.16
COL9A3-211ENST00000477612 RHOCP08134 193 aa22.32■■□□□ 1.16
COL9A3-211ENST00000477612 GPD1P21695 349 aa22.32■■□□□ 1.16
COL9A3-211ENST00000477612 C5AR1P21730 350 aa22.32■■□□□ 1.16
COL9A3-211ENST00000477612 SLC8A1P32418 973 aa22.32■■□□□ 1.16
COL9A3-211ENST00000477612 PRKCIP41743 596 aa22.32■■□□□ 1.16
COL9A3-211ENST00000477612 HDAC4P56524 1084 aa22.32■■□□□ 1.16
COL9A3-211ENST00000477612 KRT83P78385 493 aa22.32■■□□□ 1.16
COL9A3-211ENST00000477612 CDO1Q16878 200 aa22.32■■□□□ 1.16
COL9A3-211ENST00000477612 FIGNQ5HY92 759 aa22.32■■□□□ 1.16
COL9A3-211ENST00000477612 C6orf118Q5T5N4 469 aa22.32■■□□□ 1.16
COL9A3-211ENST00000477612 MCOLN2Q8IZK6 566 aa22.32■■□□□ 1.16
COL9A3-211ENST00000477612 NTAN1Q96AB6 310 aa22.32■■□□□ 1.16
COL9A3-211ENST00000477612 C2orf49Q9BVC5 232 aaPredicted RBP22.32■■□□□ 1.16
COL9A3-211ENST00000477612 ZDHHC5Q9C0B5 715 aa22.32■■□□□ 1.16
COL9A3-211ENST00000477612 ZYG11BQ9C0D3 744 aa22.32■■□□□ 1.16
COL9A3-211ENST00000477612 MUC3BQ9H195 1237 aa22.32■■□□□ 1.16
COL9A3-211ENST00000477612 FSCN3Q9NQT6 498 aa22.32■■□□□ 1.16
COL9A3-211ENST00000477612 EIF2B4Q9UI10 523 aaKnown RBP22.32■■□□□ 1.16
COL9A3-211ENST00000477612 PLXNA2O75051 1894 aa22.32■■□□□ 1.16
COL9A3-211ENST00000477612 LRRC53A6NM62 1247 aa22.31■■□□□ 1.16
COL9A3-211ENST00000477612 SRGAP2O75044 1071 aa22.31■■□□□ 1.16
COL9A3-211ENST00000477612 ADH1BP00325 375 aa22.31■■□□□ 1.16
COL9A3-211ENST00000477612 VAV1P15498 845 aa22.31■■□□□ 1.16
COL9A3-211ENST00000477612 TNFAIP3P21580 790 aa22.31■■□□□ 1.16
COL9A3-211ENST00000477612 OR1E1P30953 314 aa22.31■■□□□ 1.16
COL9A3-211ENST00000477612 DLG2Q15700 870 aa22.31■■□□□ 1.16
COL9A3-211ENST00000477612 DCAF4L2Q8NA75 395 aa22.31■■□□□ 1.16
COL9A3-211ENST00000477612 FAM172AQ8WUF8 416 aa22.31■■□□□ 1.16
COL9A3-211ENST00000477612 NEUROG2Q9H2A3 272 aa22.31■■□□□ 1.16
COL9A3-211ENST00000477612 SEPT11Q9NVA2 429 aaKnown RBP22.31■■□□□ 1.16
COL9A3-211ENST00000477612 DNAAF2Q9NVR5 837 aaKnown RBP22.31■■□□□ 1.16
COL9A3-211ENST00000477612 OR12D3Q9UGF7 316 aa22.31■■□□□ 1.16
COL9A3-211ENST00000477612 SERGEFQ9UGK8 458 aa22.31■■□□□ 1.16
COL9A3-211ENST00000477612 TP53BP1Q12888 1972 aaPredicted RBP22.3■■□□□ 1.16
COL9A3-211ENST00000477612 A0A0D9SEW6 157 aa22.3■■□□□ 1.16
COL9A3-211ENST00000477612 CXorf51AA0A1B0GTR3 108 aa22.3■■□□□ 1.16
COL9A3-211ENST00000477612 A0A1W2PP55 124 aa22.3■■□□□ 1.16
COL9A3-211ENST00000477612 MCF2LO15068 1137 aa22.3■■□□□ 1.16
COL9A3-211ENST00000477612 ALOX15BO15296 676 aa22.3■■□□□ 1.16
COL9A3-211ENST00000477612 BCAT2O15382 392 aaPredicted RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms