RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 CLIP4Q8N3C7 705 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 FAM109AQ8N4B1 249 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 LHFPL5Q8TAF8 219 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 FRS2Q8WU20 508 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 TTC17Q96AE7 1141 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 CNDP2Q96KP4 475 aaKnown RBP12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 RHOBTB2Q9BYZ6 727 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 GCOM2Q9BZD3 368 aaPredicted RBP12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 WDR12Q9GZL7 423 aaKnown RBP12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 ST6GALNAC4Q9H4F1 302 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 BCAS3Q9H6U6 928 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 PPCSQ9HAB8 311 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 KCNK13Q9HB14 408 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 ERVK-5Q9HDB9 667 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 AGPAT3Q9NRZ7 376 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 PNPLA3Q9NST1 481 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 TBK1Q9UHD2 729 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 ATP6V1HQ9UI12 483 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 RIMKLBQ9ULI2 386 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 VPS4AQ9UN37 437 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 MAGEB16A2A368 324 aa12.92□□□□□ -0.34
RTFDC1-207ENST00000477573 GTPBP10A4D1E9 387 aaKnown RBP12.92□□□□□ -0.34
RTFDC1-207ENST00000477573 C2orf81A6NN90 581 aa12.92□□□□□ -0.34
RTFDC1-207ENST00000477573 A8MX80 341 aa12.92□□□□□ -0.34
RTFDC1-207ENST00000477573 PDPK1O15530 556 aa12.92□□□□□ -0.34
RTFDC1-207ENST00000477573 THAP12O43422 761 aa12.92□□□□□ -0.34
RTFDC1-207ENST00000477573 CTNNA2P26232 953 aa12.92□□□□□ -0.34
RTFDC1-207ENST00000477573 KRT20P35900 424 aa12.92□□□□□ -0.34
RTFDC1-207ENST00000477573 PIK3CAP42336 1068 aa12.92□□□□□ -0.34
RTFDC1-207ENST00000477573 NAMPTP43490 491 aa12.92□□□□□ -0.34
RTFDC1-207ENST00000477573 NDST2P52849 883 aa12.92□□□□□ -0.34
RTFDC1-207ENST00000477573 PGM2L1Q6PCE3 622 aa12.92□□□□□ -0.34
RTFDC1-207ENST00000477573 DBX2Q6ZNG2 339 aa12.92□□□□□ -0.34
RTFDC1-207ENST00000477573 RELL1Q8IUW5 271 aa12.92□□□□□ -0.34
RTFDC1-207ENST00000477573 CLYBLQ8N0X4 340 aa12.92□□□□□ -0.34
RTFDC1-207ENST00000477573 FBXL6Q8N531 539 aa12.92□□□□□ -0.34
RTFDC1-207ENST00000477573 AADATQ8N5Z0 425 aa12.92□□□□□ -0.34
RTFDC1-207ENST00000477573 EPS8L1Q8TE68 723 aa12.92□□□□□ -0.34
RTFDC1-207ENST00000477573 ERLEC1Q96DZ1 483 aa12.92□□□□□ -0.34
RTFDC1-207ENST00000477573 CLSTN3Q9BQT9 956 aa12.92□□□□□ -0.34
RTFDC1-207ENST00000477573 TRPV6Q9H1D0 765 aa12.92□□□□□ -0.34
RTFDC1-207ENST00000477573 VPS11Q9H270 941 aa12.92□□□□□ -0.34
RTFDC1-207ENST00000477573 TRABDQ9H4I3 376 aa12.92□□□□□ -0.34
RTFDC1-207ENST00000477573 AAASQ9NRG9 546 aa12.92□□□□□ -0.34
RTFDC1-207ENST00000477573 GIMAP4Q9NUV9 329 aa12.92□□□□□ -0.34
RTFDC1-207ENST00000477573 SORCS3Q9UPU3 1222 aa12.92□□□□□ -0.34
RTFDC1-207ENST00000477573 SCN4AP35499 1836 aa12.92□□□□□ -0.34
RTFDC1-207ENST00000477573 CLPXO76031 633 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 OR5F1O95221 314 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 ITGB3P05106 788 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 DLDP09622 509 aaKnown RBP12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 CA4P22748 312 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 GSTM2P28161 218 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 RFC1P35251 1148 aaPredicted RBP12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 NR4A2P43354 598 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 CASP4P49662 377 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 ACTR2P61160 394 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 POLR2GP62487 172 aaKnown RBP eCLIP12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 S100A12P80511 92 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 GALK2Q01415 458 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 BNIP3Q12983 259 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 FAM102BQ5T8I3 360 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 RHBDF2Q6PJF5 856 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 CCDC105Q8IYK2 499 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 MCPH1Q8NEM0 835 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 TMEM174Q8WUU8 243 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 ZFPM2Q8WW38 1151 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 RMND5BQ96G75 393 aaPredicted RBP12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 SAMD11Q96NU1 681 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 SECISBP2Q96T21 854 aaKnown RBP12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 GOLPH3Q9H4A6 298 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 DPEP3Q9H4B8 488 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 HMG20AQ9NP66 347 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 DMAC2Q9NW81 257 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 EIF3LQ9Y262 564 aaKnown RBP12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 TESMINQ9Y4I5 508 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 MAU2Q9Y6X3 613 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 SF3B1O75533 1304 aaKnown RBP eCLIP12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 MYOCOSA0A1B0GUC4 107 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 FOXO6A8MYZ6 492 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 CLDN25C9JDP6 229 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 DDX3YO15523 660 aaKnown RBP12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 GRIN3BO60391 1043 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 NTRK1P04629 796 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 ENO1P06733 434 aaKnown RBP12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 ITIH2P19823 946 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 GRK2P25098 689 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 HPCAL1P37235 193 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 CPA2P48052 419 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 CYP2J2P51589 502 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 GTF2BQ00403 316 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 DMP1Q13316 513 aaPredicted RBP12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 ASIC2Q16515 512 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 CYP1B1Q16678 543 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 SWSAP1Q6NVH7 229 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 LLGL2Q6P1M3 1020 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 ABHD15Q6UXT9 468 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 TANKQ92844 425 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 SLC35C1Q96A29 364 aa12.91□□□□□ -0.34
RTFDC1-207ENST00000477573 OMA1Q96E52 524 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms