RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 KCNK16Q96T55 309 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 MYCBPQ99417 103 aaPredicted RBP16.82■□□□□ 0.28
TMEM53-208ENST00000476724 TRIM62Q9BVG3 475 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 VANGL2Q9ULK5 521 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 HHLA1C9JL84 531 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 F8W810 466 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 PSMD3O43242 534 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 RPSAP08865 295 aaKnown RBP16.81■□□□□ 0.28
TMEM53-208ENST00000476724 CCL5P13501 91 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 GM2AP17900 193 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 PAX3P23760 479 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 TYK2P29597 1187 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 GALNT2Q10471 571 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 CCDC153Q494R4 210 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 HSF5Q4G112 596 aaPredicted RBP16.81■□□□□ 0.28
TMEM53-208ENST00000476724 TIGD5Q53EQ6 642 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 KCTD11Q693B1 232 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 CD300LGQ6UXG3 332 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 ALYREFQ86V81 257 aaKnown RBP16.81■□□□□ 0.28
TMEM53-208ENST00000476724 OR52K1Q8NGK4 314 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 N4BP2L2Q92802 583 aaPredicted RBP16.81■□□□□ 0.28
TMEM53-208ENST00000476724 BEGAINQ9BUH8 593 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 RNF208Q9H0X6 261 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 GBA3Q9H227 469 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 PPARGC1AQ9UBK2 798 aaKnown RBP16.81■□□□□ 0.28
TMEM53-208ENST00000476724 NKX1-2Q9UD57 310 aaPredicted RBP16.81■□□□□ 0.28
TMEM53-208ENST00000476724 EMCNQ9ULC0 261 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 SCN5AQ14524 2016 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 C2orf71A6NGG8 1288 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 B4GALT3O60512 393 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 NBNO60934 754 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 SERPINE1P05121 402 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 SELPP16109 830 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 CYP2C18P33260 490 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 BRCC3P46736 316 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 GRIK3Q13003 919 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 PM20D1Q6GTS8 502 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 DCLRE1AQ6PJP8 1040 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 RINLQ6ZS11 566 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 TTC7BQ86TV6 843 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 TEX9Q8N6V9 391 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 NETO2Q8NC67 525 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 ADAM32Q8TC27 787 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 PRR11Q96HE9 360 aaPredicted RBP16.81■□□□□ 0.28
TMEM53-208ENST00000476724 C20orf27Q9GZN8 174 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 ANLNQ9NQW6 1124 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 BATF3Q9NR55 127 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 PIH1D1Q9NWS0 290 aaKnown RBP16.81■□□□□ 0.28
TMEM53-208ENST00000476724 PSAT1Q9Y617 370 aa16.81■□□□□ 0.28
TMEM53-208ENST00000476724 MAGEC1O60732 1142 aa16.8■□□□□ 0.28
TMEM53-208ENST00000476724 ERVK-10P10266 1014 aa16.8■□□□□ 0.28
TMEM53-208ENST00000476724 FGF3P11487 239 aaPredicted RBP16.8■□□□□ 0.28
TMEM53-208ENST00000476724 SKIP12755 728 aa16.8■□□□□ 0.28
TMEM53-208ENST00000476724 MAGEA12P43365 314 aa16.8■□□□□ 0.28
TMEM53-208ENST00000476724 SLC1A6P48664 564 aa16.8■□□□□ 0.28
TMEM53-208ENST00000476724 COG7P83436 770 aa16.8■□□□□ 0.28
TMEM53-208ENST00000476724 BEND5Q7L4P6 421 aa16.8■□□□□ 0.28
TMEM53-208ENST00000476724 GPRIN1Q7Z2K8 1008 aa16.8■□□□□ 0.28
TMEM53-208ENST00000476724 METTL23Q86XA0 190 aa16.8■□□□□ 0.28
TMEM53-208ENST00000476724 TP53INP2Q8IXH6 220 aa16.8■□□□□ 0.28
TMEM53-208ENST00000476724 MAB21L3Q8N8X9 362 aa16.8■□□□□ 0.28
TMEM53-208ENST00000476724 DNAAF3Q8N9W5 541 aa16.8■□□□□ 0.28
TMEM53-208ENST00000476724 PPP4R1Q8TF05 950 aa16.8■□□□□ 0.28
TMEM53-208ENST00000476724 RILPQ96NA2 401 aa16.8■□□□□ 0.28
TMEM53-208ENST00000476724 RBBP8Q99708 897 aa16.8■□□□□ 0.28
TMEM53-208ENST00000476724 ACBD6Q9BR61 282 aa16.8■□□□□ 0.28
TMEM53-208ENST00000476724 ZNF395Q9H8N7 513 aaPredicted RBP16.8■□□□□ 0.28
TMEM53-208ENST00000476724 OR12D3Q9UGF7 316 aa16.8■□□□□ 0.28
TMEM53-208ENST00000476724 TAGLN3Q9UI15 199 aa16.8■□□□□ 0.28
TMEM53-208ENST00000476724 LRRC42Q9Y546 428 aa16.8■□□□□ 0.28
TMEM53-208ENST00000476724 I6L893 689 aaPredicted RBP16.79■□□□□ 0.28
TMEM53-208ENST00000476724 ZBTB24O43167 697 aaPredicted RBP16.79■□□□□ 0.28
TMEM53-208ENST00000476724 B3GAT3O94766 335 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 PROCP04070 461 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 ITGB1P05556 798 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 KITP10721 976 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 ODC1P11926 461 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 SERPINB8P50452 374 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 ATN1P54259 1190 aaPredicted RBP16.79■□□□□ 0.28
TMEM53-208ENST00000476724 PRPSAP1Q14558 356 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 CLLU1OSQ5K130 101 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 TEDDM1Q5T9Z0 273 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 C16orf46Q6P387 395 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 SLC24A5Q71RS6 500 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 ZNF669Q96BR6 464 aaPredicted RBP16.79■□□□□ 0.28
TMEM53-208ENST00000476724 FCRL3Q96P31 734 aaPredicted RBP16.79■□□□□ 0.28
TMEM53-208ENST00000476724 AGAP3Q96P47 875 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 GORASP1Q9BQQ3 440 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 TKTL2Q9H0I9 626 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 OGDHLQ9ULD0 1010 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 B2RBV5 119 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 PQBP1O60828 265 aaKnown RBP16.79■□□□□ 0.28
TMEM53-208ENST00000476724 ENTPD5O75356 428 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 MPOP05164 745 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 GCKP35557 465 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 LIMK2P53671 638 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 RPL10AP62906 217 aaKnown RBP16.79■□□□□ 0.28
TMEM53-208ENST00000476724 IRX4P78413 519 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 TUSC3Q13454 348 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 PCLAFQ15004 111 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms