RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 VPS50Q96JG6 964 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 ZNF184Q99676 751 aaPredicted RBP5.09□□□□□ -1.59
CCDC39-204ENST00000476379 CENPKQ9BS16 269 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 CNPY3Q9BT09 278 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 TBCDQ9BTW9 1192 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 ULBP1Q9BZM6 244 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 BPIFA1Q9NP55 256 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 NT5MQ9NPB1 228 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 SMPD4Q9NXE4 827 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 M0QZ92 97 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 CA12O43570 354 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 E2F6O75461 281 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 TRUB2O95900 331 aaKnown RBP5.09□□□□□ -1.59
CCDC39-204ENST00000476379 PYGLP06737 847 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 POLBP06746 335 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 CPB1P15086 417 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 UBE3AQ05086 875 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 C1QBPQ07021 282 aaKnown RBP5.09□□□□□ -1.59
CCDC39-204ENST00000476379 DLG1Q12959 904 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 DDX39BQ13838 428 aaKnown RBP5.09□□□□□ -1.59
CCDC39-204ENST00000476379 FAM83EQ2M2I3 478 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 AP5B1Q2VPB7 878 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 MTX3Q5HYI7 312 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 HFE2Q6ZVN8 426 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 ACAD11Q709F0 780 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 OTOP2Q7RTS6 562 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 SPRED2Q7Z698 418 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 OFCC1Q8IZS5 231 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 BEST2Q8NFU1 509 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 PCDH19Q8TAB3 1148 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 DNAJB14Q8TBM8 379 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 C10orf82Q8WW14 230 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 WNT8BQ93098 351 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 MTFMTQ96DP5 389 aaKnown RBP5.09□□□□□ -1.59
CCDC39-204ENST00000476379 PAWRQ96IZ0 340 aaKnown RBP5.09□□□□□ -1.59
CCDC39-204ENST00000476379 SEPT5Q99719 369 aaPredicted RBP5.09□□□□□ -1.59
CCDC39-204ENST00000476379 CIB1Q99828 191 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 C1orf50Q9BV19 199 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 FTHL17Q9BXU8 183 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 PHACTR1Q9C0D0 580 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 ALG2Q9H553 416 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 TCF7L2Q9NQB0 619 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 SLC7A8Q9UHI5 535 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 TAGLN3Q9UI15 199 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 VANGL2Q9ULK5 521 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 U3KQV3 271 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 DMDP11532 3685 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 A0A1B0GUL6 1792 aa5.09□□□□□ -1.6
CCDC39-204ENST00000476379 APOC4-APOC2K7ER74 178 aa5.09□□□□□ -1.6
CCDC39-204ENST00000476379 ZC3H11AO75152 810 aaKnown RBP eCLIP5.09□□□□□ -1.6
CCDC39-204ENST00000476379 ATP5HO75947 161 aa5.09□□□□□ -1.6
CCDC39-204ENST00000476379 APOC2P02655 101 aa5.09□□□□□ -1.6
CCDC39-204ENST00000476379 ASGR1P07306 291 aa5.09□□□□□ -1.6
CCDC39-204ENST00000476379 NFKB1P19838 968 aa5.09□□□□□ -1.6
CCDC39-204ENST00000476379 THPOP40225 353 aa5.09□□□□□ -1.6
CCDC39-204ENST00000476379 GALK1P51570 392 aa5.09□□□□□ -1.6
CCDC39-204ENST00000476379 FCGRTP55899 365 aa5.09□□□□□ -1.6
CCDC39-204ENST00000476379 DAB2P98082 770 aa5.09□□□□□ -1.6
CCDC39-204ENST00000476379 SREBF2Q12772 1141 aa5.09□□□□□ -1.6
CCDC39-204ENST00000476379 MPP3Q13368 585 aa5.09□□□□□ -1.6
CCDC39-204ENST00000476379 LAMC2Q13753 1193 aa5.09□□□□□ -1.6
CCDC39-204ENST00000476379 POM121L1PQ3SYA9 428 aa5.09□□□□□ -1.6
CCDC39-204ENST00000476379 SYPL2Q5VXT5 272 aa5.09□□□□□ -1.6
CCDC39-204ENST00000476379 CRELD2Q6UXH1 353 aaPredicted RBP5.09□□□□□ -1.6
CCDC39-204ENST00000476379 CDKL3Q8IVW4 592 aaPredicted RBP5.09□□□□□ -1.6
CCDC39-204ENST00000476379 KBTBD2Q8IY47 623 aa5.09□□□□□ -1.6
CCDC39-204ENST00000476379 PLD6Q8N2A8 252 aaKnown RBP5.09□□□□□ -1.6
CCDC39-204ENST00000476379 PLD5Q8N7P1 536 aa5.09□□□□□ -1.6
CCDC39-204ENST00000476379 B4GALNT2Q8NHY0 566 aa5.09□□□□□ -1.6
CCDC39-204ENST00000476379 RSPH1Q8WYR4 309 aa5.09□□□□□ -1.6
CCDC39-204ENST00000476379 DPF3Q92784 378 aa5.09□□□□□ -1.6
CCDC39-204ENST00000476379 GFM2Q969S9 779 aaKnown RBP5.09□□□□□ -1.6
CCDC39-204ENST00000476379 TUBGCP3Q96CW5 907 aa5.09□□□□□ -1.6
CCDC39-204ENST00000476379 GPRASP2Q96D09 838 aa5.09□□□□□ -1.6
CCDC39-204ENST00000476379 CCDC138Q96M89 665 aa5.09□□□□□ -1.6
CCDC39-204ENST00000476379 LENG8Q96PV6 779 aaPredicted RBP5.09□□□□□ -1.6
CCDC39-204ENST00000476379 RNF157Q96PX1 679 aa5.09□□□□□ -1.6
CCDC39-204ENST00000476379 AP5M1Q9H0R1 490 aa5.09□□□□□ -1.6
CCDC39-204ENST00000476379 ACSS3Q9H6R3 686 aa5.09□□□□□ -1.6
CCDC39-204ENST00000476379 PRKAG3Q9UGI9 489 aa5.09□□□□□ -1.6
CCDC39-204ENST00000476379 F8W810 466 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 ALOX15BO15296 676 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 TP73O15350 636 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 CD1EP15812 388 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 NFKBIAP25963 317 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 IVDP26440 423 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 GRK4P32298 578 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 BRCC3P46736 316 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 DGKEP52429 567 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 GK3PQ14409 553 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 KCNA10Q16322 511 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 SLC9A4Q6AI14 798 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 XYLT1Q86Y38 959 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 WDTC1Q8N5D0 677 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 CNDP1Q96KN2 507 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 MFSD14AQ96MC6 490 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 MBOAT7Q96N66 472 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 OR52B2Q96RD2 323 aa5.08□□□□□ -1.6
CCDC39-204ENST00000476379 ACO2Q99798 780 aaKnown RBP5.08□□□□□ -1.6
CCDC39-204ENST00000476379 EPAS1Q99814 870 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms