RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 CYP2U1Q7Z449 544 aa16.11■□□□□ 0.17
CPSF3-203ENST00000475482 WFDC5Q8TCV5 224 aa16.11■□□□□ 0.17
CPSF3-203ENST00000475482 FNIP1Q8TF40 1166 aa16.11■□□□□ 0.17
CPSF3-203ENST00000475482 TCEAL3Q969E4 200 aa16.11■□□□□ 0.17
CPSF3-203ENST00000475482 MYEOVQ96EZ4 313 aa16.11■□□□□ 0.17
CPSF3-203ENST00000475482 HES6Q96HZ4 224 aa16.11■□□□□ 0.17
CPSF3-203ENST00000475482 PRICKLE1Q96MT3 831 aaPredicted RBP16.11■□□□□ 0.17
CPSF3-203ENST00000475482 MCEEQ96PE7 176 aa16.11■□□□□ 0.17
CPSF3-203ENST00000475482 OSBPL9Q96SU4 736 aa16.11■□□□□ 0.17
CPSF3-203ENST00000475482 NCAPGQ9BPX3 1015 aa16.11■□□□□ 0.17
CPSF3-203ENST00000475482 MKRN2Q9H000 416 aaKnown RBP16.11■□□□□ 0.17
CPSF3-203ENST00000475482 TMEM245Q9H330 911 aa16.11■□□□□ 0.17
CPSF3-203ENST00000475482 EVLQ9UI08 416 aaPredicted RBP16.11■□□□□ 0.17
CPSF3-203ENST00000475482 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.1■□□□□ 0.17
CPSF3-203ENST00000475482 TCRBV5S1A1TA0A578 114 aa16.1■□□□□ 0.17
CPSF3-203ENST00000475482 DCDC2BA2VCK2 349 aa16.1■□□□□ 0.17
CPSF3-203ENST00000475482 PROSCO94903 275 aa16.1■□□□□ 0.17
CPSF3-203ENST00000475482 SLU7O95391 586 aaKnown RBP16.1■□□□□ 0.17
CPSF3-203ENST00000475482 TRUB2O95900 331 aaKnown RBP16.1■□□□□ 0.17
CPSF3-203ENST00000475482 PABPC1P11940 636 aaKnown RBP16.1■□□□□ 0.17
CPSF3-203ENST00000475482 COMTP21964 271 aa16.1■□□□□ 0.17
CPSF3-203ENST00000475482 PRKCHP24723 683 aa16.1■□□□□ 0.17
CPSF3-203ENST00000475482 PAFAH1B1P43034 410 aa16.1■□□□□ 0.17
CPSF3-203ENST00000475482 DHPSP49366 369 aaPredicted RBP16.1■□□□□ 0.17
CPSF3-203ENST00000475482 PITX1P78337 314 aaPredicted RBP16.1■□□□□ 0.17
CPSF3-203ENST00000475482 SLC6A3Q01959 620 aa16.1■□□□□ 0.17
CPSF3-203ENST00000475482 STARD3Q14849 445 aa16.1■□□□□ 0.17
CPSF3-203ENST00000475482 MS4A13Q5J8X5 152 aa16.1■□□□□ 0.17
CPSF3-203ENST00000475482 EFHC1Q5JVL4 640 aa16.1■□□□□ 0.17
CPSF3-203ENST00000475482 PPP1R15BQ5SWA1 713 aa16.1■□□□□ 0.17
CPSF3-203ENST00000475482 STPG1Q5TH74 334 aa16.1■□□□□ 0.17
CPSF3-203ENST00000475482 CCDC181Q5TID7 509 aa16.1■□□□□ 0.17
CPSF3-203ENST00000475482 OLFML1Q6UWY5 402 aa16.1■□□□□ 0.17
CPSF3-203ENST00000475482 TMEFF1Q8IYR6 380 aa16.1■□□□□ 0.17
CPSF3-203ENST00000475482 AHI1Q8N157 1196 aa16.1■□□□□ 0.17
CPSF3-203ENST00000475482 ZNF557Q8N988 423 aaPredicted RBP16.1■□□□□ 0.17
CPSF3-203ENST00000475482 FIBINQ8TAL6 211 aa16.1■□□□□ 0.17
CPSF3-203ENST00000475482 ADAM32Q8TC27 787 aa16.1■□□□□ 0.17
CPSF3-203ENST00000475482 SORCS1Q8WY21 1168 aa16.1■□□□□ 0.17
CPSF3-203ENST00000475482 DDX50Q9BQ39 737 aaKnown RBP16.1■□□□□ 0.17
CPSF3-203ENST00000475482 TMEM74BQ9NUR3 256 aa16.1■□□□□ 0.17
CPSF3-203ENST00000475482 ABCB8Q9NUT2 735 aa16.1■□□□□ 0.17
CPSF3-203ENST00000475482 USP36Q9P275 1121 aaKnown RBP16.1■□□□□ 0.17
CPSF3-203ENST00000475482 GGA2Q9UJY4 613 aa16.1■□□□□ 0.17
CPSF3-203ENST00000475482 NUMA1Q14980 2115 aa16.09■□□□□ 0.17
CPSF3-203ENST00000475482 LNP1A1A4G5 178 aa16.09■□□□□ 0.17
CPSF3-203ENST00000475482 KCNU1A8MYU2 1149 aa16.09■□□□□ 0.17
CPSF3-203ENST00000475482 CAPN9O14815 690 aa16.09■□□□□ 0.17
CPSF3-203ENST00000475482 ZBTB24O43167 697 aaPredicted RBP16.09■□□□□ 0.17
CPSF3-203ENST00000475482 MAP3K13O43283 966 aa16.09■□□□□ 0.17
CPSF3-203ENST00000475482 TBL1XO60907 577 aa16.09■□□□□ 0.17
CPSF3-203ENST00000475482 HSF2BPO75031 334 aa16.09■□□□□ 0.17
CPSF3-203ENST00000475482 IGLV3-19P01714 112 aa16.09■□□□□ 0.17
CPSF3-203ENST00000475482 HOXD12P35452 270 aa16.09■□□□□ 0.17
CPSF3-203ENST00000475482 DPP6P42658 865 aa16.09■□□□□ 0.17
CPSF3-203ENST00000475482 COPAP53621 1224 aa16.09■□□□□ 0.17
CPSF3-203ENST00000475482 TERF1P54274 439 aa16.09■□□□□ 0.17
CPSF3-203ENST00000475482 RPS24P62847 133 aaKnown RBP16.09■□□□□ 0.17
CPSF3-203ENST00000475482 CAMK2GQ13555 558 aaPredicted RBP16.09■□□□□ 0.17
CPSF3-203ENST00000475482 ZC3H12AQ5D1E8 599 aaKnown RBP16.09■□□□□ 0.17
CPSF3-203ENST00000475482 CHST9Q7L1S5 443 aa16.09■□□□□ 0.17
CPSF3-203ENST00000475482 SLC26A9Q7LBE3 791 aa16.09■□□□□ 0.17
CPSF3-203ENST00000475482 ARCQ7LC44 396 aa16.09■□□□□ 0.17
CPSF3-203ENST00000475482 PHLDB2Q86SQ0 1253 aa16.09■□□□□ 0.17
CPSF3-203ENST00000475482 SYT12Q8IV01 421 aa16.09■□□□□ 0.17
CPSF3-203ENST00000475482 DEFB106AQ8N104 65 aa16.09■□□□□ 0.17
CPSF3-203ENST00000475482 NIPA2Q8N8Q9 360 aa16.09■□□□□ 0.17
CPSF3-203ENST00000475482 HJURPQ8NCD3 748 aaPredicted RBP16.09■□□□□ 0.17
CPSF3-203ENST00000475482 TTC17Q96AE7 1141 aa16.09■□□□□ 0.17
CPSF3-203ENST00000475482 ZNF419Q96HQ0 510 aaPredicted RBP16.09■□□□□ 0.17
CPSF3-203ENST00000475482 BTN2A3PQ96KV6 586 aa16.09■□□□□ 0.17
CPSF3-203ENST00000475482 PRMT1Q99873 361 aaKnown RBP16.09■□□□□ 0.17
CPSF3-203ENST00000475482 CIPCQ9C0C6 399 aa16.09■□□□□ 0.17
CPSF3-203ENST00000475482 SLC6A17Q9H1V8 727 aa16.09■□□□□ 0.17
CPSF3-203ENST00000475482 CD93Q9NPY3 652 aa16.09■□□□□ 0.17
CPSF3-203ENST00000475482 ITM2CQ9NQX7 267 aa16.09■□□□□ 0.17
CPSF3-203ENST00000475482 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.09■□□□□ 0.17
CPSF3-203ENST00000475482 XPO7Q9UIA9 1087 aaKnown RBP16.09■□□□□ 0.17
CPSF3-203ENST00000475482 PILRBQ9UKJ0 227 aa16.09■□□□□ 0.17
CPSF3-203ENST00000475482 TPRP12270 2363 aaKnown RBP16.09■□□□□ 0.17
CPSF3-203ENST00000475482 PCNX2A6NKB5 2137 aa16.09■□□□□ 0.17
CPSF3-203ENST00000475482 PATE3B3GLJ2 98 aa16.08■□□□□ 0.16
CPSF3-203ENST00000475482 KCNK3O14649 394 aa16.08■□□□□ 0.16
CPSF3-203ENST00000475482 RIOK3O14730 519 aaKnown RBP16.08■□□□□ 0.16
CPSF3-203ENST00000475482 KHNYNO15037 678 aaKnown RBP16.08■□□□□ 0.16
CPSF3-203ENST00000475482 RNF8O76064 485 aa16.08■□□□□ 0.16
CPSF3-203ENST00000475482 DLDP09622 509 aaKnown RBP16.08■□□□□ 0.16
CPSF3-203ENST00000475482 CTNNA2P26232 953 aa16.08■□□□□ 0.16
CPSF3-203ENST00000475482 CD70P32970 193 aa16.08■□□□□ 0.16
CPSF3-203ENST00000475482 RPL6Q02878 288 aaKnown RBP16.08■□□□□ 0.16
CPSF3-203ENST00000475482 LYSMD4Q5XG99 296 aa16.08■□□□□ 0.16
CPSF3-203ENST00000475482 MBLAC2Q68D91 279 aa16.08■□□□□ 0.16
CPSF3-203ENST00000475482 FAM183BPQ6ZVS7 135 aa16.08■□□□□ 0.16
CPSF3-203ENST00000475482 TMPRSS6Q8IU80 811 aa16.08■□□□□ 0.16
CPSF3-203ENST00000475482 SLC41A1Q8IVJ1 513 aa16.08■□□□□ 0.16
CPSF3-203ENST00000475482 PIGKQ92643 395 aa16.08■□□□□ 0.16
CPSF3-203ENST00000475482 MYO19Q96H55 970 aa16.08■□□□□ 0.16
CPSF3-203ENST00000475482 NAP1L3Q99457 506 aaPredicted RBP16.08■□□□□ 0.16
CPSF3-203ENST00000475482 CARD9Q9H257 536 aa16.08■□□□□ 0.16
CPSF3-203ENST00000475482 PRDM16Q9HAZ2 1276 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms