RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 LRRIQ4A6NIV6 560 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 GOLGA8MH3BSY2 632 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 CTDSP2O14595 271 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 DPM1O60762 260 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 BANF1O75531 89 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 ZBTB11O95625 1053 aaPredicted RBP4.19□□□□□ -1.74
USP16-205ENST00000474835 SUPT20HL2P0C7V6 817 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 ZSCAN5DPP0CG00 497 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 ATF2P15336 505 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 CRHBPP24387 322 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 SHMT1P34896 483 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 SERPINB6P35237 376 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 CETN2P41208 172 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 CASP3P42574 277 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 RAP1GAPP47736 663 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 PPP2R5DQ14738 602 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 MMEL1Q495T6 779 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 IQCCQ4KMZ1 466 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 PKDCCQ504Y2 493 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 PYCR3Q53H96 274 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 SGO2Q562F6 1265 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 TTC39BQ5VTQ0 682 aaPredicted RBP4.19□□□□□ -1.74
USP16-205ENST00000474835 OLFML2BQ68BL8 750 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 LAMTOR1Q6IAA8 161 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 USP17L1Q7RTZ2 530 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 MRPL10Q7Z7H8 261 aaKnown RBP4.19□□□□□ -1.74
USP16-205ENST00000474835 GALNT7Q86SF2 657 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 SLC26A11Q86WA9 606 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 FAM20CQ8IXL6 584 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 CERKQ8TCT0 537 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 CENPIQ92674 756 aaPredicted RBP4.19□□□□□ -1.74
USP16-205ENST00000474835 GCNAQ96QF7 691 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 PHF12Q96QT6 1004 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.19□□□□□ -1.74
USP16-205ENST00000474835 MEAF6Q9HAF1 191 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 A0A0B4J293 547 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 LINC00862A6NCI5 91 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 PAPSS1O43252 624 aaPredicted RBP4.19□□□□□ -1.74
USP16-205ENST00000474835 HPRP00739 348 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 GAAP10253 952 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 BMP4P12644 408 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 BTF3P20290 206 aaKnown RBP4.19□□□□□ -1.74
USP16-205ENST00000474835 PTX3P26022 381 aaPredicted RBP4.19□□□□□ -1.74
USP16-205ENST00000474835 PRKCQQ04759 706 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 PCDH1Q08174 1060 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 NFX1Q12986 1120 aaKnown RBP4.19□□□□□ -1.74
USP16-205ENST00000474835 PDE1CQ14123 709 aaPredicted RBP4.19□□□□□ -1.74
USP16-205ENST00000474835 DOC2BQ14184 412 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 TMED2Q15363 201 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 TDRD12Q587J7 1177 aaKnown RBP4.19□□□□□ -1.74
USP16-205ENST00000474835 FAM47CQ5HY64 1035 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 ZC3H12BQ5HYM0 836 aaKnown RBP4.19□□□□□ -1.74
USP16-205ENST00000474835 FAM47AQ5JRC9 791 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 TRAPPC3LQ5T215 181 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 RASIP1Q5U651 963 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 CLEC4GQ6UXB4 293 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 SCARA5Q6ZMJ2 495 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 KRT28Q7Z3Y7 464 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 KRT27Q7Z3Y8 459 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 WDR49Q8IV35 697 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 DSELQ8IZU8 1212 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 PQLC3Q8N755 202 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 BMPERQ8N8U9 685 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 GPR150Q8NGU9 434 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 SNX29Q8TEQ0 813 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 RAPGEF4Q8WZA2 1011 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 PEX13Q92968 403 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 RNF31Q96EP0 1072 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 FAM161BQ96MY7 647 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 PIGSQ96S52 555 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 FEM1AQ9BSK4 669 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 COQ10BQ9H8M1 238 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 RC3H2Q9HBD1 1191 aaKnown RBP4.19□□□□□ -1.74
USP16-205ENST00000474835 RAVER2Q9HCJ3 691 aaKnown RBP4.19□□□□□ -1.74
USP16-205ENST00000474835 C6orf50Q9HD87 102 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 CYTH4Q9UIA0 394 aa4.19□□□□□ -1.74
USP16-205ENST00000474835 EXOC1LA0A1B0GW35 172 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.18□□□□□ -1.74
USP16-205ENST00000474835 SPECC1L-ADORA2AF8WAN1 911 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 GUCY1B2O75343 617 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 PGLSO95336 258 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 USP17L8P0C7I0 530 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 ESRRAP11474 423 aaPredicted RBP4.18□□□□□ -1.74
USP16-205ENST00000474835 MLNP12872 115 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 KCNA5P22460 613 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 GGT5P36269 586 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 GZMMP51124 257 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 DNAJB13P59910 316 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 BAMBIQ13145 260 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 HIC1Q14526 733 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 IRF3Q14653 427 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 CDK10Q15131 360 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 HIST2H2ACQ16777 129 aaPredicted RBP4.18□□□□□ -1.74
USP16-205ENST00000474835 CRY2Q49AN0 593 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 CCDC58Q4VC31 144 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 HSP90AA5PQ58FG0 334 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 SYT6Q5T7P8 510 aaPredicted RBP4.18□□□□□ -1.74
USP16-205ENST00000474835 SEL1L2Q5TEA6 688 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 SCARA3Q6AZY7 606 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 POTEGQ6S5H5 508 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms