RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 STK39Q9UEW8 545 aa22.23■■□□□ 1.15
CCM2-206ENST00000474617 MAFFQ9ULX9 164 aa22.23■■□□□ 1.15
CCM2-206ENST00000474617 SNX10Q9Y5X0 201 aa22.23■■□□□ 1.15
CCM2-206ENST00000474617 CXorf49A8MYA2 514 aaPredicted RBP22.22■■□□□ 1.15
CCM2-206ENST00000474617 DFFAO00273 331 aa22.22■■□□□ 1.15
CCM2-206ENST00000474617 EDF1O60869 148 aaKnown RBP22.22■■□□□ 1.15
CCM2-206ENST00000474617 EFCAB14O75071 495 aa22.22■■□□□ 1.15
CCM2-206ENST00000474617 PYGBP11216 843 aa22.22■■□□□ 1.15
CCM2-206ENST00000474617 HADHAP40939 763 aa22.22■■□□□ 1.15
CCM2-206ENST00000474617 ETV4P43268 484 aa22.22■■□□□ 1.15
CCM2-206ENST00000474617 TNK2Q07912 1038 aa22.22■■□□□ 1.15
CCM2-206ENST00000474617 CCDC15Q0P6D6 951 aa22.22■■□□□ 1.15
CCM2-206ENST00000474617 GRTP1Q5TC63 336 aa22.22■■□□□ 1.15
CCM2-206ENST00000474617 SNX30Q5VWJ9 437 aa22.22■■□□□ 1.15
CCM2-206ENST00000474617 KLHDC10Q6PID8 442 aa22.22■■□□□ 1.15
CCM2-206ENST00000474617 TRPM8Q7Z2W7 1104 aa22.22■■□□□ 1.15
CCM2-206ENST00000474617 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.22■■□□□ 1.15
CCM2-206ENST00000474617 CERS2Q96G23 380 aa22.22■■□□□ 1.15
CCM2-206ENST00000474617 SERAC1Q96JX3 654 aa22.22■■□□□ 1.15
CCM2-206ENST00000474617 PGLYRP2Q96PD5 576 aa22.22■■□□□ 1.15
CCM2-206ENST00000474617 ENTPD7Q9NQZ7 604 aa22.22■■□□□ 1.15
CCM2-206ENST00000474617 SYBUQ9NX95 663 aa22.22■■□□□ 1.15
CCM2-206ENST00000474617 ZFATQ9P243 1243 aa22.22■■□□□ 1.15
CCM2-206ENST00000474617 PRKAG3Q9UGI9 489 aa22.22■■□□□ 1.15
CCM2-206ENST00000474617 ZNF638Q14966 1978 aaKnown RBP22.22■■□□□ 1.15
CCM2-206ENST00000474617 CSH1P0DML2 217 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 CSH2P0DML3 217 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 ALDH3A1P30838 453 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 CRHR1P34998 444 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 GP5P40197 560 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 RENBPP51606 427 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 ILF2Q12905 390 aaKnown RBP22.21■■□□□ 1.15
CCM2-206ENST00000474617 TAF10Q12962 218 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 HNRNPDQ14103 355 aaKnown RBP22.21■■□□□ 1.15
CCM2-206ENST00000474617 RTP2Q5QGT7 225 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 TPGS2Q68CL5 300 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 KYAT3Q6YP21 454 aaKnown RBP22.21■■□□□ 1.15
CCM2-206ENST00000474617 TP53INP2Q8IXH6 220 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 RNF168Q8IYW5 571 aaPredicted RBP22.21■■□□□ 1.15
CCM2-206ENST00000474617 ZNF683Q8IZ20 524 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 NSMCE1Q8WV22 266 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 ZNF75CPQ92670 426 aaPredicted RBP22.21■■□□□ 1.15
CCM2-206ENST00000474617 SEPT5Q99719 369 aaPredicted RBP22.21■■□□□ 1.15
CCM2-206ENST00000474617 GORASP1Q9BQQ3 440 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 CRISPLD2Q9H0B8 497 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 MRM3Q9HC36 420 aaKnown RBP22.21■■□□□ 1.15
CCM2-206ENST00000474617 GLOD4Q9HC38 313 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 PHTF1Q9UMS5 762 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 SOX13Q9UN79 622 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 RPS6KL1Q9Y6S9 549 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 FNDC1Q4ZHG4 1894 aaPredicted RBP22.21■■□□□ 1.15
CCM2-206ENST00000474617 DRGXA6NNA5 263 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 RFPL1O75677 317 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 NEBLO76041 1014 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 MAPKAPK2P49137 400 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 YBEYP58557 167 aaPredicted RBP22.21■■□□□ 1.15
CCM2-206ENST00000474617 USP46P62068 366 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 INSCQ1MX18 579 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 PARP15Q460N3 678 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 SPDYAQ5MJ70 313 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 C10orf120Q5SQS8 335 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 ARTNQ5T4W7 220 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 PIK3R6Q5UE93 754 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 TRMT10BQ6PF06 316 aaKnown RBP22.21■■□□□ 1.15
CCM2-206ENST00000474617 POTEHQ6S545 545 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 RNF19BQ6ZMZ0 732 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 GPR65Q8IYL9 337 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 FBXO22Q8NEZ5 403 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 OR52K1Q8NGK4 314 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 CELF6Q96J87 481 aaKnown RBP22.21■■□□□ 1.15
CCM2-206ENST00000474617 SRPK1Q96SB4 655 aaKnown RBP22.21■■□□□ 1.15
CCM2-206ENST00000474617 MLPHQ9BV36 600 aaPredicted RBP22.21■■□□□ 1.15
CCM2-206ENST00000474617 CEP41Q9BYV8 373 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 SLC39A8Q9C0K1 460 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 SMYD2Q9NRG4 433 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 VPS45Q9NRW7 570 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 AFF4Q9UHB7 1163 aaKnown RBP22.21■■□□□ 1.15
CCM2-206ENST00000474617 PLLPQ9Y342 182 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 NR2E3Q9Y5X4 410 aa22.21■■□□□ 1.15
CCM2-206ENST00000474617 MYO18AQ92614 2054 aaKnown RBP22.2■■□□□ 1.14
CCM2-206ENST00000474617 DNAH12Q6ZR08 3092 aa22.2■■□□□ 1.14
CCM2-206ENST00000474617 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.2■■□□□ 1.14
CCM2-206ENST00000474617 BIRC5O15392 142 aa22.2■■□□□ 1.14
CCM2-206ENST00000474617 TGDSO95455 350 aa22.2■■□□□ 1.14
CCM2-206ENST00000474617 TROVE2P10155 538 aaKnown RBP eCLIP22.2■■□□□ 1.14
CCM2-206ENST00000474617 PPP3CCP48454 512 aa22.2■■□□□ 1.14
CCM2-206ENST00000474617 EFEMP1Q12805 493 aa22.2■■□□□ 1.14
CCM2-206ENST00000474617 MPP3Q13368 585 aa22.2■■□□□ 1.14
CCM2-206ENST00000474617 MS4A13Q5J8X5 152 aa22.2■■□□□ 1.14
CCM2-206ENST00000474617 PACS1Q6VY07 963 aa22.2■■□□□ 1.14
CCM2-206ENST00000474617 MANSC1Q9H8J5 431 aa22.2■■□□□ 1.14
CCM2-206ENST00000474617 ABHD14A-ACY1A0A1B0GW23 586 aa22.19■■□□□ 1.14
CCM2-206ENST00000474617 SLC38A8A6NNN8 435 aa22.19■■□□□ 1.14
CCM2-206ENST00000474617 MOCS2O96007 188 aaPredicted RBP22.19■■□□□ 1.14
CCM2-206ENST00000474617 ADRA1DP25100 572 aa22.19■■□□□ 1.14
CCM2-206ENST00000474617 SPRP35270 261 aaPredicted RBP22.19■■□□□ 1.14
CCM2-206ENST00000474617 GPR15P49685 360 aa22.19■■□□□ 1.14
CCM2-206ENST00000474617 PGFP49763 221 aa22.19■■□□□ 1.14
CCM2-206ENST00000474617 CSE1LP55060 971 aaKnown RBP22.19■■□□□ 1.14
CCM2-206ENST00000474617 ARPP19P56211 112 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms