RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, human

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM50B-208	ENST00000474272	SPATA2L	Q8IUW3	424 aa	Predicted RBP	3.99	□□□□□ -1.77
TMEM50B-208	ENST00000474272	ANKRD18A	Q8IVF6	992 aa		3.99	□□□□□ -1.77
TMEM50B-208	ENST00000474272	HERC6	Q8IVU3	1022 aa		3.99	□□□□□ -1.77
TMEM50B-208	ENST00000474272	UEVLD	Q8IX04	471 aa		3.99	□□□□□ -1.77
TMEM50B-208	ENST00000474272	FTSJ3	Q8IY81	847 aa	Known RBP	3.99	□□□□□ -1.77
TMEM50B-208	ENST00000474272	IQCF1	Q8N6M8	205 aa		3.99	□□□□□ -1.77
TMEM50B-208	ENST00000474272	OR52L2P	Q8NGH6	319 aa		3.99	□□□□□ -1.77
TMEM50B-208	ENST00000474272	TMEM174	Q8WUU8	243 aa		3.99	□□□□□ -1.77
TMEM50B-208	ENST00000474272	HMGB4	Q8WW32	186 aa		3.99	□□□□□ -1.77
TMEM50B-208	ENST00000474272	AKAP1	Q92667	903 aa	Known RBP eCLIP	3.99	□□□□□ -1.77
TMEM50B-208	ENST00000474272	C3orf49	Q96BT1	292 aa		3.99	□□□□□ -1.77
TMEM50B-208	ENST00000474272	PIMREG	Q9BSJ6	248 aa		3.99	□□□□□ -1.77
TMEM50B-208	ENST00000474272	TWSG1	Q9GZX9	223 aa		3.99	□□□□□ -1.77
TMEM50B-208	ENST00000474272	BRD8	Q9H0E9	1235 aa		3.99	□□□□□ -1.77
TMEM50B-208	ENST00000474272	ABHD16B	Q9H3Z7	469 aa		3.99	□□□□□ -1.77
TMEM50B-208	ENST00000474272	CDCP1	Q9H5V8	836 aa		3.99	□□□□□ -1.77
TMEM50B-208	ENST00000474272	CCDC134	Q9H6E4	229 aa		3.99	□□□□□ -1.77
TMEM50B-208	ENST00000474272	SEPSECS	Q9HD40	501 aa	Known RBP	3.99	□□□□□ -1.77
TMEM50B-208	ENST00000474272	FZD3	Q9NPG1	666 aa		3.99	□□□□□ -1.77
TMEM50B-208	ENST00000474272	G6PC2	Q9NQR9	355 aa		3.99	□□□□□ -1.77
TMEM50B-208	ENST00000474272	RRN3	Q9NYV6	651 aa		3.99	□□□□□ -1.77
TMEM50B-208	ENST00000474272	KIF17	Q9P2E2	1029 aa		3.99	□□□□□ -1.77
TMEM50B-208	ENST00000474272	KCND3	Q9UK17	655 aa		3.99	□□□□□ -1.77
TMEM50B-208	ENST00000474272	TRIP12	Q14669	1992 aa	Predicted RBP	3.99	□□□□□ -1.77
TMEM50B-208	ENST00000474272	KIR2DS5	A0A0G2JLQ3	304 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	KIR2DS3	K7RE56	304 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	EIF3F	O00303	357 aa	Predicted RBP	3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	NCAM2	O15394	837 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	PRPF4	O43172	522 aa	Known RBP eCLIP	3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	HEXIM1	O94992	359 aa	Known RBP	3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	PAPSS2	O95340	614 aa	Predicted RBP	3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	LARGE1	O95461	756 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	TK1	P04183	234 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	ACAA1	P09110	424 aa	Predicted RBP	3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	TFEB	P19484	476 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	MMP8	P22894	467 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	TBXAS1	P24557	533 aa	Predicted RBP	3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	NDUFS1	P28331	727 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	SERPINA4	P29622	427 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	HOXD12	P35452	270 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	TAS2R50	P59544	299 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	RPL15	P61313	204 aa	Known RBP	3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	GAD2	Q05329	585 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	RPS6KA2	Q15349	733 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	SMAD1	Q15797	465 aa	Known RBP	3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	ADCK5	Q3MIX3	580 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	HSP90AB4P	Q58FF6	505 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	FBXO47	Q5MNV8	452 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	PIK3CD-AS1	Q5SR53	167 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	ANKRD40	Q6AI12	368 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	DGAT2L7P	Q6IED9	249 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	DHRS13	Q6UX07	377 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	KYAT3	Q6YP21	454 aa	Known RBP	3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	TRIL	Q7L0X0	811 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	TRAPPC11	Q7Z392	1133 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	C2CD5	Q86YS7	1000 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	RHPN2	Q8IUC4	686 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	OR6Y1	Q8NGX8	325 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	WFIKKN2	Q8TEU8	576 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	AFG1L	Q8WV93	481 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	GLMP	Q8WWB7	406 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	CPT1B	Q92523	772 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	REXO5	Q96IC2	774 aa	Known RBP	3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	FAR2	Q96K12	515 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	UBXN10	Q96LJ8	280 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	SLITRK1	Q96PX8	696 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	NDUFAF4	Q9P032	175 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	RAB21	Q9UL25	225 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	TRPC5	Q9UL62	973 aa	Predicted RBP	3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272	EVPL	Q92817	2033 aa		3.98	□□□□□ -1.77
TMEM50B-208	ENST00000474272		A0A087WYN8	130 aa		3.97	□□□□□ -1.77
TMEM50B-208	ENST00000474272	EFCAB8	A8MWE9	144 aa		3.97	□□□□□ -1.77
TMEM50B-208	ENST00000474272		E7EVH7	732 aa		3.97	□□□□□ -1.77
TMEM50B-208	ENST00000474272	NPHP1	O15259	732 aa		3.97	□□□□□ -1.77
TMEM50B-208	ENST00000474272	KRT86	O43790	486 aa		3.97	□□□□□ -1.77
TMEM50B-208	ENST00000474272	FGF3	P11487	239 aa	Predicted RBP	3.97	□□□□□ -1.77
TMEM50B-208	ENST00000474272	CKMT1A	P12532	417 aa		3.97	□□□□□ -1.77
TMEM50B-208	ENST00000474272	MATN1	P21941	496 aa		3.97	□□□□□ -1.77
TMEM50B-208	ENST00000474272	MLH1	P40692	756 aa		3.97	□□□□□ -1.77
TMEM50B-208	ENST00000474272	ZNF84	P51523	738 aa		3.97	□□□□□ -1.77
TMEM50B-208	ENST00000474272	FOXL2	P58012	376 aa		3.97	□□□□□ -1.77
TMEM50B-208	ENST00000474272	RNASEL	Q05823	741 aa	Known RBP	3.97	□□□□□ -1.77
TMEM50B-208	ENST00000474272	PDCL	Q13371	301 aa		3.97	□□□□□ -1.77
TMEM50B-208	ENST00000474272	CBFB	Q13951	182 aa		3.97	□□□□□ -1.77
TMEM50B-208	ENST00000474272	KRT81	Q14533	505 aa		3.97	□□□□□ -1.77
TMEM50B-208	ENST00000474272	DLGAP5	Q15398	846 aa		3.97	□□□□□ -1.77
TMEM50B-208	ENST00000474272	SYT13	Q7L8C5	426 aa		3.97	□□□□□ -1.77
TMEM50B-208	ENST00000474272	LMO3	Q8TAP4	145 aa		3.97	□□□□□ -1.77
TMEM50B-208	ENST00000474272	GOLGA1	Q92805	767 aa		3.97	□□□□□ -1.77
TMEM50B-208	ENST00000474272	INPP5D	Q92835	1189 aa		3.97	□□□□□ -1.77
TMEM50B-208	ENST00000474272	ZSCAN31	Q96LW9	406 aa	Predicted RBP	3.97	□□□□□ -1.77
TMEM50B-208	ENST00000474272	SENP7	Q9BQF6	1050 aa		3.97	□□□□□ -1.77
TMEM50B-208	ENST00000474272	PYM1	Q9BRP8	204 aa	Known RBP	3.97	□□□□□ -1.77
TMEM50B-208	ENST00000474272	ELOVL1	Q9BW60	279 aa		3.97	□□□□□ -1.77
TMEM50B-208	ENST00000474272	LIN7C	Q9NUP9	197 aa	Known RBP	3.97	□□□□□ -1.77
TMEM50B-208	ENST00000474272	RCE1	Q9Y256	329 aa		3.97	□□□□□ -1.77
TMEM50B-208	ENST00000474272	AGAP5	A6NIR3	686 aa		3.96	□□□□□ -1.78
TMEM50B-208	ENST00000474272	MBD3L5	A6NJ08	208 aa	Predicted RBP	3.96	□□□□□ -1.78
TMEM50B-208	ENST00000474272	GRID2	O43424	1007 aa		3.96	□□□□□ -1.78
TMEM50B-208	ENST00000474272	KRT38	O76015	456 aa		3.96	□□□□□ -1.78

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