RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 DCTN3O75935 186 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 ATP5HO75947 161 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 TSPAN15O95858 294 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 INHBAP08476 426 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 FAM163BP0C2L3 166 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 TROVE2P10155 538 aaKnown RBP eCLIP6.08□□□□□ -1.444e-8■■■■■ 72
ATPAF1-204ENST00000474020 RBP3P10745 1247 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 NEFHP12036 1026 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 CYP3A5P20815 502 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 CA4P22748 312 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 ARL4AP40617 200 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 RGS2P41220 211 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 PTPN9P43378 593 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 TAF6P49848 677 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 CDH8P55286 799 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 OGDHQ02218 1023 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 CLCQ05315 142 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 XRCC4Q13426 336 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 NOMO1Q15155 1222 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 TAZQ16635 292 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 BBS9Q3SYG4 887 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 LACTB2Q53H82 288 aaPredicted RBP6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 FBXO47Q5MNV8 452 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 DAB2IPQ5VWQ8 1189 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 NUGGCQ68CJ6 796 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 ARHGAP17Q68EM7 881 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 GK5Q6ZS86 529 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 FAM183BPQ6ZVS7 135 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 TRPM8Q7Z2W7 1104 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 SLITRK4Q8IW52 837 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 LRRC34Q8IZ02 419 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 KIAA0319LQ8IZA0 1049 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 LILRA2Q8N149 483 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 VPS52Q8N1B4 723 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 OXR1Q8N573 874 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 WDTC1Q8N5D0 677 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 EMC1Q8N766 993 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 FAM71DQ8N9W8 422 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 FBXO15Q8NCQ5 510 aaPredicted RBP6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 GDAP1Q8TB36 358 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 UBA3Q8TBC4 463 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 CKAP2Q8WWK9 683 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 RXFP2Q8WXD0 754 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 FAF2Q96CS3 445 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 MAML3Q96JK9 1138 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 ZNF317Q96PQ6 595 aaPredicted RBP6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 FAM118BQ9BPY3 351 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 PAIP2Q9BPZ3 127 aaKnown RBP6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 ELAC2Q9BQ52 826 aaKnown RBP6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 ZNF670Q9BS34 389 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 C16orf70Q9BSU1 422 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 TRIM62Q9BVG3 475 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 HDAC8Q9BY41 377 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 PITPNM3Q9BZ71 974 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 SLC38A7Q9NVC3 462 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 TBK1Q9UHD2 729 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 STAP1Q9ULZ2 295 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 NAALADL1Q9UQQ1 740 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 PIN4Q9Y237 131 aaKnown RBP6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 C17orf102A2RUQ5 167 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 FITM1A5D6W6 292 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 C3orf70A6NLC5 250 aaPredicted RBP6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 MEIS3P2A8K0S8 358 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 HACD1B0YJ81 288 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 MDM4O15151 490 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 ATP2C2O75185 946 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 DNAJC8O75937 253 aaPredicted RBP6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 KRT37O76014 449 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 FBXO21O94952 628 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 SNAI1O95863 264 aaPredicted RBP6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 MT-ND3P03897 115 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 MYL3P08590 195 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 ZSCAN5DPP0CG00 497 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 SMIM10L2AP0DMW4 78 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 SMIM10L2BP0DMW5 78 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 DARSP14868 501 aaKnown RBP6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 RPL22P35268 128 aaKnown RBP6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 GNL1P36915 607 aaPredicted RBP6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 CCNFP41002 786 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 NR2C2P49116 596 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 RGS7P49802 495 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 RASSF2P50749 326 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 YWHAGP61981 247 aaKnown RBP eCLIP6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 TEKQ02763 1124 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 DPYSL3Q14195 570 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 NR0B2Q15466 257 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 CDO1Q16878 200 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 KIZQ2M2Z5 673 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 KRTAP19-4Q3LI73 84 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 CCDC14Q49A88 953 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 ATP13A4Q4VNC1 1196 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 ANKRD20A8PQ5CZ79 823 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 KCNT1Q5JUK3 1230 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 C9orf57Q5W0N0 161 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 TAF2Q6P1X5 1199 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 C6orf89Q6UWU4 347 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 DLK2Q6UY11 383 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 ARCQ7LC44 396 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 NLRC3Q7RTR2 1065 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 TMEM110Q86TL2 294 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms