RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 CCDC144NLQ6NUI1 221 aa2.13□□□□□ -2.07
CCDC39-203ENST00000473854 AAGABQ6PD74 315 aa2.13□□□□□ -2.07
CCDC39-203ENST00000473854 NEK10Q6ZWH5 1172 aa2.13□□□□□ -2.07
CCDC39-203ENST00000473854 STXBP4Q6ZWJ1 553 aa2.13□□□□□ -2.07
CCDC39-203ENST00000473854 MAEAQ7L5Y9 396 aa2.13□□□□□ -2.07
CCDC39-203ENST00000473854 TAS1R2Q8TE23 839 aa2.13□□□□□ -2.07
CCDC39-203ENST00000473854 SLC35F5Q8WV83 523 aa2.13□□□□□ -2.07
CCDC39-203ENST00000473854 SORCS1Q8WY21 1168 aa2.13□□□□□ -2.07
CCDC39-203ENST00000473854 ZNF524Q96C55 264 aa2.13□□□□□ -2.07
CCDC39-203ENST00000473854 UNKQ9C0B0 810 aaKnown RBP2.13□□□□□ -2.07
CCDC39-203ENST00000473854 SFXN1Q9H9B4 322 aa2.13□□□□□ -2.07
CCDC39-203ENST00000473854 TMOD4Q9NZQ9 345 aa2.13□□□□□ -2.07
CCDC39-203ENST00000473854 ANKRD6Q9Y2G4 727 aa2.13□□□□□ -2.07
CCDC39-203ENST00000473854 PRSS21Q9Y6M0 314 aa2.13□□□□□ -2.07
CCDC39-203ENST00000473854 CFTRP13569 1480 aa2.13□□□□□ -2.07
CCDC39-203ENST00000473854 ABCA5Q8WWZ7 1642 aa2.13□□□□□ -2.07
CCDC39-203ENST00000473854 DNMBPQ6XZF7 1577 aa2.12□□□□□ -2.07
CCDC39-203ENST00000473854 LAMC3Q9Y6N6 1575 aa2.12□□□□□ -2.07
CCDC39-203ENST00000473854 SOGA1O94964 1423 aa2.12□□□□□ -2.07
CCDC39-203ENST00000473854 WRNQ14191 1432 aaPredicted RBP eCLIP2.12□□□□□ -2.07
CCDC39-203ENST00000473854 A0A0U1RQJ8 604 aa2.12□□□□□ -2.07
CCDC39-203ENST00000473854 TPP1O14773 563 aa2.12□□□□□ -2.07
CCDC39-203ENST00000473854 FRS3O43559 492 aa2.12□□□□□ -2.07
CCDC39-203ENST00000473854 SLC22A3O75751 556 aa2.12□□□□□ -2.07
CCDC39-203ENST00000473854 AMBPP02760 352 aa2.12□□□□□ -2.07
CCDC39-203ENST00000473854 SLC37A1P57057 533 aa2.12□□□□□ -2.07
CCDC39-203ENST00000473854 IRX6P78412 446 aaPredicted RBP2.12□□□□□ -2.07
CCDC39-203ENST00000473854 DLG1Q12959 904 aa2.12□□□□□ -2.07
CCDC39-203ENST00000473854 FAM50AQ14320 339 aaKnown RBP2.12□□□□□ -2.07
CCDC39-203ENST00000473854 SPINK14Q6IE38 97 aa2.12□□□□□ -2.07
CCDC39-203ENST00000473854 HEPHL1Q6MZM0 1159 aa2.12□□□□□ -2.07
CCDC39-203ENST00000473854 NEK9Q8TD19 979 aa2.12□□□□□ -2.07
CCDC39-203ENST00000473854 ZNF414Q96IQ9 312 aa2.12□□□□□ -2.07
CCDC39-203ENST00000473854 GFM1Q96RP9 751 aaKnown RBP2.12□□□□□ -2.07
CCDC39-203ENST00000473854 SMAD5Q99717 465 aaKnown RBP2.12□□□□□ -2.07
CCDC39-203ENST00000473854 SLC12A5Q9H2X9 1139 aa2.12□□□□□ -2.07
CCDC39-203ENST00000473854 IL21RQ9HBE5 538 aa2.12□□□□□ -2.07
CCDC39-203ENST00000473854 ATP6V0A4Q9HBG4 840 aa2.12□□□□□ -2.07
CCDC39-203ENST00000473854 SPC25Q9HBM1 224 aa2.12□□□□□ -2.07
CCDC39-203ENST00000473854 ZBTB26Q9HCK0 441 aa2.12□□□□□ -2.07
CCDC39-203ENST00000473854 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.12□□□□□ -2.07
CCDC39-203ENST00000473854 DDX43Q9NXZ2 648 aaKnown RBP2.12□□□□□ -2.07
CCDC39-203ENST00000473854 STK32BQ9NY57 414 aa2.12□□□□□ -2.07
CCDC39-203ENST00000473854 ZNF212Q9UDV6 495 aa2.12□□□□□ -2.07
CCDC39-203ENST00000473854 RAI2Q9Y5P3 530 aa2.12□□□□□ -2.07
CCDC39-203ENST00000473854 NESP48681 1621 aa2.12□□□□□ -2.07
CCDC39-203ENST00000473854 THOC2Q8NI27 1593 aaKnown RBP2.11□□□□□ -2.07
CCDC39-203ENST00000473854 TARBP1Q13395 1621 aaKnown RBP2.11□□□□□ -2.07
CCDC39-203ENST00000473854 IGHV4OR15-8A0A075B7B6 117 aa2.11□□□□□ -2.07
CCDC39-203ENST00000473854 KCNJ18B7U540 433 aa2.11□□□□□ -2.07
CCDC39-203ENST00000473854 LDB2O43679 373 aa2.11□□□□□ -2.07
CCDC39-203ENST00000473854 ATP1A1P05023 1023 aaKnown RBP2.11□□□□□ -2.07
CCDC39-203ENST00000473854 HSPA6P17066 643 aa2.11□□□□□ -2.07
CCDC39-203ENST00000473854 RPS16P62249 146 aaKnown RBP2.11□□□□□ -2.07
CCDC39-203ENST00000473854 MYBPHQ13203 477 aa2.11□□□□□ -2.07
CCDC39-203ENST00000473854 CNGA2Q16280 664 aa2.11□□□□□ -2.07
CCDC39-203ENST00000473854 LPAL2Q16609 132 aa2.11□□□□□ -2.07
CCDC39-203ENST00000473854 ABLIM2Q6H8Q1 611 aa2.11□□□□□ -2.07
CCDC39-203ENST00000473854 WDR93Q6P2C0 686 aa2.11□□□□□ -2.07
CCDC39-203ENST00000473854 MON1BQ7L1V2 547 aa2.11□□□□□ -2.07
CCDC39-203ENST00000473854 ZBTB46Q86UZ6 589 aa2.11□□□□□ -2.07
CCDC39-203ENST00000473854 FAM76AQ8TAV0 307 aa2.11□□□□□ -2.07
CCDC39-203ENST00000473854 CHMP4CQ96CF2 233 aa2.11□□□□□ -2.07
CCDC39-203ENST00000473854 NMRK2Q9NPI5 230 aa2.11□□□□□ -2.07
CCDC39-203ENST00000473854 HEYLQ9NQ87 328 aaPredicted RBP2.11□□□□□ -2.07
CCDC39-203ENST00000473854 TYW1Q9NV66 732 aaKnown RBP2.11□□□□□ -2.07
CCDC39-203ENST00000473854 UBE2J1Q9Y385 318 aaPredicted RBP2.11□□□□□ -2.07
CCDC39-203ENST00000473854 LMTK3Q96Q04 1460 aa2.11□□□□□ -2.07
CCDC39-203ENST00000473854 CFAP43Q8NDM7 1665 aa2.11□□□□□ -2.07
CCDC39-203ENST00000473854 CUL7Q14999 1698 aa2.1□□□□□ -2.07
CCDC39-203ENST00000473854 FGD5Q6ZNL6 1462 aa2.1□□□□□ -2.07
CCDC39-203ENST00000473854 TRBV5-7A0A0A0MS05 114 aa2.1□□□□□ -2.07
CCDC39-203ENST00000473854 PRPF3O43395 683 aaKnown RBP2.1□□□□□ -2.07
CCDC39-203ENST00000473854 ITM2AO43736 263 aa2.1□□□□□ -2.07
CCDC39-203ENST00000473854 MYF5P13349 255 aa2.1□□□□□ -2.07
CCDC39-203ENST00000473854 SLC5A2P31639 672 aa2.1□□□□□ -2.07
CCDC39-203ENST00000473854 CDKN1CP49918 316 aaPredicted RBP2.1□□□□□ -2.07
CCDC39-203ENST00000473854 EVA1CP58658 441 aa2.1□□□□□ -2.07
CCDC39-203ENST00000473854 PPIGQ13427 754 aaKnown RBP eCLIP2.1□□□□□ -2.07
CCDC39-203ENST00000473854 ZNF267Q14586 743 aaPredicted RBP2.1□□□□□ -2.07
CCDC39-203ENST00000473854 ZNF284Q2VY69 593 aa2.1□□□□□ -2.07
CCDC39-203ENST00000473854 C3orf38Q5JPI3 329 aa2.1□□□□□ -2.07
CCDC39-203ENST00000473854 TMEM88Q6PEY1 159 aa2.1□□□□□ -2.07
CCDC39-203ENST00000473854 C19orf48Q6RUI8 117 aa2.1□□□□□ -2.07
CCDC39-203ENST00000473854 UNC13DQ70J99 1090 aa2.1□□□□□ -2.07
CCDC39-203ENST00000473854 CCDC25Q86WR0 208 aa2.1□□□□□ -2.07
CCDC39-203ENST00000473854 KLBQ86Z14 1044 aa2.1□□□□□ -2.07
CCDC39-203ENST00000473854 MIGA1Q8NAN2 632 aa2.1□□□□□ -2.07
CCDC39-203ENST00000473854 ZNF248Q8NDW4 579 aa2.1□□□□□ -2.07
CCDC39-203ENST00000473854 TXNDC15Q96J42 360 aa2.1□□□□□ -2.07
CCDC39-203ENST00000473854 FAR2Q96K12 515 aa2.1□□□□□ -2.07
CCDC39-203ENST00000473854 EGFL8Q99944 293 aa2.1□□□□□ -2.07
CCDC39-203ENST00000473854 ACTR5Q9H9F9 607 aaPredicted RBP2.1□□□□□ -2.07
CCDC39-203ENST00000473854 TXNRD2Q9NNW7 524 aa2.1□□□□□ -2.07
CCDC39-203ENST00000473854 FBXO28Q9NVF7 368 aa2.1□□□□□ -2.07
CCDC39-203ENST00000473854 OGFRQ9NZT2 677 aa2.1□□□□□ -2.07
CCDC39-203ENST00000473854 TPCN1Q9ULQ1 816 aa2.1□□□□□ -2.07
CCDC39-203ENST00000473854 SLC45A1Q9Y2W3 748 aa2.1□□□□□ -2.07
CCDC39-203ENST00000473854 KLF2Q9Y5W3 355 aaPredicted RBP2.1□□□□□ -2.07
CCDC39-203ENST00000473854 ERICH3Q5RHP9 1530 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms